Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008422g0010 Nicotiana tabacum HOM05D007692 ORTHO05D009696 1.3e-91 339.7 178 100.0
Nitab4.5_0000446g0120 Nicotiana tabacum HOM05D007692 ORTHO05D009696 5.8e-87 324.3 178 94.4
PGSC0003DMG400045083 Solanum tuberosum HOM05D007692 ORTHO05D009696 5.6e-82 307.8 178 90.4
Peaxi162Scf00486g00102 Petunia axillaris HOM05D007692 ORTHO05D009696 4.7e-81 304.7 178 88.2
Sopen08g017100 Solanum pennellii HOM05D007692 ORTHO05D009696 3.4e-79 298.5 178 88.2
Solyc08g061640.1 Solanum lycopersicum HOM05D007692 ORTHO05D009696 8.3e-78 293.9 178 87.1
CAN.G567.82 Capsicum annuum HOM05D007692 ORTHO05D009696 9.2e-77 290.4 175 84.6
Duzib168G1711 Durio zibethinus HOM05D007692 ORTHO05D009696 3.0e-35 152.5 189 46.6
Manes.16G085800 Manihot esculenta HOM05D007692 ORTHO05D009696 6.7e-35 151.4 176 47.7
Thecc.09G063700 Theobroma cacao HOM05D007692 ORTHO05D009696 1.1e-34 150.6 188 45.2
COL.COLO4_21142 Corchorus olitorius HOM05D007692 ORTHO05D009696 5.7e-34 148.3 190 43.7
Dinv22937 Davidia involucrata HOM05D007692 ORTHO05D009696 1.2e-31 140.6 191 47.6
Hma1.2p1_0278F.1_g111850 Hydrangea macrophylla HOM05D007692 ORTHO05D009696 3.4e-31 139.0 107 67.3
Prupe.1G403900 Prunus persica HOM05D007692 ORTHO05D009696 4.2e-29 132.1 106 65.1
Nn2g12400 Nelumbo nucifera HOM05D007692 ORTHO05D009696 6.1e-28 128.3 98 64.3
MD08G1071600 Malus domestica HOM05D007692 ORTHO05D009696 2.3e-27 126.3 111 57.7
Haze_18297 Corylus avellana HOM05D007692 ORTHO05D009696 3.9e-27 125.6 101 66.3
MD15G1049600 Malus domestica HOM05D007692 ORTHO05D009696 6.7e-27 124.8 111 58.6
Cpa.g.sc126.21 Carica papaya HOM05D007692 ORTHO05D009696 1.1e-26 124.0 110 59.1
Oeu003971.1 Olea europaea HOM05D007692 ORTHO05D009696 1.9e-26 123.2 100 59.0
RcHm_v2.0_Chr6g0311901 Rosa chinensis HOM05D007692 ORTHO05D009696 2.5e-26 122.9 101 63.4
SalBow4G0926 Salvia bowleyana HOM05D007692 ORTHO05D009696 2.5e-26 122.9 101 57.4
Potri.006G220500 Populus trichocarpa HOM05D007692 ORTHO05D009696 5.7e-26 121.7 101 59.4
Sabra06G0170400 Salix brachista HOM05D007692 ORTHO05D009696 1.3e-25 120.6 93 61.3
QL02p017055 Quercus lobata HOM05D007692 ORTHO05D009696 1.7e-25 120.2 109 56.9
DCAR_001232 Daucus carota HOM05D006390 ORTHO05D007899 2.2e-25 119.8 97 60.8
Gohir.D05G040100 Gossypium hirsutum HOM05D007692 ORTHO05D009696 2.2e-25 119.8 171 41.5
Gorai.009G040500 Gossypium raimondii HOM05D007692 ORTHO05D009696 2.2e-25 119.8 171 41.5
FvH4_2g30960 Fragaria vesca HOM05D007692 ORTHO05D009696 2.8e-25 119.4 111 56.8
CSS0041722 Camellia sinensis var. sinensis HOM05D007692 ORTHO05D009696 8.2e-25 117.9 89 64.0
QL02p017043 Quercus lobata HOM05D007692 ORTHO05D009696 1.4e-24 117.1 109 56.0
SGA_v2.0_scaffold20G09157 Striga asiatica HOM05D006390 ORTHO05D007899 3.1e-24 115.9 101 57.4
TAR624G0897 Trochodendron aralioides HOM05D007692 ORTHO05D009696 5.3e-24 115.2 97 56.7
Gohir.A05G038600 Gossypium hirsutum HOM05D007692 ORTHO05D009696 6.9e-24 114.8 171 41.5
PGR031G0311 Punica granatum HOM05D007692 ORTHO05D009696 6.9e-24 114.8 96 63.5
Cfa017868 Carpinus fangiana HOM05D007692 ORTHO05D009696 9.1e-24 114.4 101 62.4
CiPaw.15G091700 Carya illinoinensis HOM05D007692 ORTHO05D009696 9.1e-24 114.4 111 53.2
EL10Ac2g03778 Beta vulgaris HOM05D007692 ORTHO05D009696 1.2e-23 114.0 102 57.8
ClCG05G015760 Citrullus lanatus HOM05D007692 ORTHO05D009696 1.7e-22 110.2 111 55.0
CANSAT25G1329 Cannabis sativa HOM05D007692 ORTHO05D009696 2.2e-22 109.8 98 56.1
MELO3C016914.2 Cucumis melo HOM05D007692 ORTHO05D009696 2.2e-22 109.8 102 58.8
CsaV3_4G036060 Cucumis sativus L. HOM05D007692 ORTHO05D009696 2.2e-22 109.8 102 58.8
Eucgr.C00729 Eucalyptus grandis HOM05D007692 ORTHO05D009696 2.9e-22 109.4 108 52.8
Glyma.17G225900 Glycine max HOM05D007692 ORTHO05D009696 2.9e-22 109.4 110 54.5
Nn8g39911 Nelumbo nucifera HOM05D007692 ORTHO05D009696 1.1e-21 107.5 99 60.6
THA.LOC104810956 Tarenaya hassleriana HOM05D007692 ORTHO05D009696 3.2e-21 105.9 111 47.7
VMungo0647G2522 Vigna mungo HOM05D007692 ORTHO05D009696 1.2e-20 104.0 111 53.2
ECA240G2866 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-20 103.6 105 56.2
unitig_32.g11527 Utricularia gibba HOM05D007692 ORTHO05D009696 1.6e-20 103.6 104 50.0
Ciclev10010178m.g Citrus clementina HOM05D007692 ORTHO05D009696 2.1e-20 103.2 105 52.4
Medtr1g015470 Medicago truncatula HOM05D007692 ORTHO05D009696 2.7e-20 102.8 100 51.0
Psat6g022960 Pisum sativum HOM05D007692 ORTHO05D009696 6.1e-20 101.7 101 50.5
Glyma.06G056100 Glycine max HOM05D007692 ORTHO05D009696 7.9e-20 101.3 101 52.5
Lsat_1_v5_gn_7_58320 Lactuca sativa HOM05D006390 ORTHO05D007899 7.9e-20 101.3 93 58.1
Lj5g0021751 Lotus japonicus HOM05D007692 ORTHO05D009696 7.9e-20 101.3 110 50.9
PSO541G2080 Papaver somniferum HOM05D007692 ORTHO05D009696 7.9e-20 101.3 103 50.5
TPR.G38893 Trifolium pratense HOM05D007692 ORTHO05D009696 1.0e-19 100.9 110 46.4
HPP92_004156 Vanilla planifolia HOM05D007692 ORTHO05D009696 1.0e-19 100.9 93 49.5
arahy.Tifrunner.gnm1.ann1.0E4SK3 Arachis hypogaea HOM05D007692 ORTHO05D009696 3.0e-19 99.4 101 50.5
PSO675G1902 Papaver somniferum HOM05D007692 ORTHO05D009696 5.1e-19 98.6 103 50.5
VMungo1309G1304 Vigna mungo HOM05D007692 ORTHO05D009696 5.1e-19 98.6 101 50.5
TPR.G3568 Trifolium pratense HOM05D007692 ORTHO05D009696 1.1e-18 97.4 112 45.5
Cc08_g01120 Coffea canephora HOM05D007692 ORTHO05D009696 1.5e-18 97.1 101 52.5
Sed0007061 Sechium edule HOM05D007692 ORTHO05D009696 1.5e-18 97.1 102 52.9
Phvul.009G082200 Phaseolus vulgaris HOM05D007692 ORTHO05D009696 3.3e-18 95.9 110 47.3
TWI63G1278 Tripterygium wilfordii HOM05D007692 ORTHO05D009696 3.3e-18 95.9 101 53.5
MBI13_g42817_MAGBIO Magnolia biondii HOM05D007692 ORTHO05D009696 5.7e-18 95.1 93 54.8
Sc06g0001120 Simmondsia chinensis HOM05D007692 ORTHO05D009696 7.4e-18 94.7 95 49.5
Ah.11g044290 Amaranthus hybridus HOM05D007692 ORTHO05D009696 1.7e-17 93.6 110 47.3
Phvul.001G038600 Phaseolus vulgaris HOM05D007692 ORTHO05D009696 6.3e-17 91.7 91 51.6
CARHR191630 Cardamine hirsuta HOM05D007692 ORTHO05D009696 8.2e-17 91.3 95 50.5
A10p18810 Brassica napus HOM05D007692 ORTHO05D009696 1.1e-16 90.9 101 47.5
C09p54830 Brassica napus HOM05D007692 ORTHO05D009696 1.1e-16 90.9 101 47.5
BolC9t58343H Brassica oleracea HOM05D007692 ORTHO05D009696 1.1e-16 90.9 101 47.5
BraA10t43961Z Brassica rapa HOM05D007692 ORTHO05D009696 1.1e-16 90.9 101 47.5
ATR0598G206 Amborella trichopoda HOM05D007692 ORTHO05D009696 1.8e-16 90.1 94 53.2
BcaB08g36470 Brassica carinata HOM05D007692 ORTHO05D009696 1.8e-16 90.1 101 47.5
HanXRQChr03g0065641 Helianthus annuus HOM05D007692 ORTHO05D009696 4.1e-16 89.0 106 49.1
Aqoxy2G03896 Aquilegia oxysepala HOM05D007692 ORTHO05D009696 5.3e-16 88.6 104 46.2
Zm00001eb005780 Zea mays HOM05D007692 ORTHO05D009696 9.1e-16 87.8 101 45.5
Psat5g030520 Pisum sativum HOM05D007692 ORTHO05D009696 1.5e-15 87.0 94 50.0
CDE04G2134 Ceratophyllum demersum HOM05D007692 ORTHO05D009696 3.4e-15 85.9 115 45.2
Thhalv10015977m.g Eutrema salsugineum HOM05D007692 ORTHO05D009696 4.5e-15 85.5 101 44.6
Medtr3g105090 Medicago truncatula HOM05D007692 ORTHO05D009696 4.5e-15 85.5 111 41.4
Medtr1g015490 Medicago truncatula HOM05D007692 ORTHO05D009696 2.2e-14 83.2 111 41.4
Lalb_Chr11g0063341 Lupinus albus HOM05D007692 ORTHO05D009696 3.8e-14 82.4 110 41.8
Os03g0176900 Oryza sativa ssp. japonica HOM05D007692 ORTHO05D009696 1.6e-12 77.0 100 42.0
Carub.0006s1955 Capsella rubella HOM05D007692 ORTHO05D009696 4.7e-12 75.5 107 41.1
Sp6g23280 Schrenkiella parvula HOM05D007692 ORTHO05D009696 4.7e-12 75.5 93 43.0
AT5G21910 Arabidopsis thaliana HOM05D007692 ORTHO05D009696 1.0e-11 74.3 107 41.1
Lj1g0020593 Lotus japonicus HOM05D007692 ORTHO05D009696 3.3e-10 69.3 111 38.7
Psat6g004480 Pisum sativum HOM05D007692 ORTHO05D009696 3.3e-10 69.3 67 52.2
Duzib150G0238 Durio zibethinus HOM05D007692 ORTHO05D009696 7.4e-10 68.2 123 40.7
Atru.chr7.1844 Acer truncatum HOM05D007692 ORTHO05D009696 2.2e-09 66.6 68 54.4
Lalb_Chr14g0366461 Lupinus albus HOM05D007692 ORTHO05D009696 6.3e-09 65.1 78 43.6
Carub.0005s0963 Capsella rubella HOM05D007692 ORTHO05D009696 1.4e-08 63.9 93 38.7
TAR624G1426 Trochodendron aralioides HOM05D000001 ORTHO05D000003 7.0e-08 61.6 63 44.4


User provided reference genes

Program Settings