Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008410g0030 Nicotiana tabacum HOM05D004779 ORTHO05D005737 2.0e-84 315.8 173 100.0
Sopen11g029350 Solanum pennellii HOM05D004779 ORTHO05D005737 2.2e-59 232.6 174 77.0
Solyc11g071680.2 Solanum lycopersicum HOM05D004779 ORTHO05D005737 1.6e-57 226.5 174 75.9
Peaxi162Scf01091g00011 Petunia axillaris HOM05D004779 ORTHO05D005737 2.8e-54 215.7 174 74.7
CAN.G439.1 Capsicum annuum HOM05D004779 ORTHO05D005737 7.9e-49 197.6 173 67.6
Cc01_g08160 Coffea canephora HOM05D004779 ORTHO05D005737 2.1e-41 172.9 177 59.3
Dinv32142 Davidia involucrata HOM05D004779 ORTHO05D005737 1.8e-37 159.8 177 55.9
RcHm_v2.0_Chr5g0049381 Rosa chinensis HOM05D004779 ORTHO05D005737 1.8e-37 159.8 182 57.1
FvH4_3g26940 Fragaria vesca HOM05D004779 ORTHO05D005737 2.0e-36 156.4 179 57.0
Hma1.2p1_0218F.1_g092300 Hydrangea macrophylla HOM05D004779 ORTHO05D005737 3.4e-36 155.6 177 55.9
FAN21G0778 Fragaria x ananassa HOM05D011291 ORTHO05D005737 2.2e-35 152.9 180 57.2
FAN22G0927 Fragaria x ananassa HOM05D004779 ORTHO05D013607 5.0e-35 151.8 174 55.7
MD11G1177500 Malus domestica HOM05D004779 ORTHO05D005737 2.5e-34 149.4 188 52.7
FAN11G2927 Fragaria x ananassa HOM05D004779 ORTHO05D005737 4.2e-34 148.7 179 54.2
Nn2g14463 Nelumbo nucifera HOM05D004779 ORTHO05D005737 7.2e-34 147.9 177 54.2
FAN16G1882 Fragaria x ananassa HOM05D004779 ORTHO05D005737 1.6e-33 146.7 181 54.7
FAN25G2723 Fragaria x ananassa HOM05D004779 ORTHO05D005737 1.6e-33 146.7 181 54.7
Oeu051492.1 Olea europaea HOM05D004779 ORTHO05D005737 1.0e-32 144.1 178 54.5
Hund20969 Selenicereus undatus HOM05D004779 ORTHO05D005737 1.8e-32 143.3 181 54.7
Glyma.02G271700 Glycine max HOM05D004779 ORTHO05D005737 3.0e-32 142.5 177 52.0
GSVIVG01037513001 Vitis vinifera HOM05D004779 ORTHO05D005737 3.0e-32 142.5 180 56.7
Glyma.14G044700 Glycine max HOM05D004779 ORTHO05D005737 5.1e-32 141.7 180 52.2
Duzib170G1005 Durio zibethinus HOM05D004779 ORTHO05D005737 8.8e-32 141.0 192 51.0
CSS0005993 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 1.1e-31 140.6 180 53.9
CSS0044664 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 1.1e-31 140.6 180 53.9
Prupe.6G149600 Prunus persica HOM05D004779 ORTHO05D005737 1.1e-31 140.6 192 51.0
SalBow6G6366 Salvia bowleyana HOM05D004779 ORTHO05D005737 1.1e-31 140.6 189 51.3
Gohir.A13G221700 Gossypium hirsutum HOM05D004779 ORTHO05D005737 2.0e-31 139.8 186 50.5
Lj2g0019509 Lotus japonicus HOM05D004779 ORTHO05D005737 2.0e-31 139.8 177 52.5
MD03G1161400 Malus domestica HOM05D004779 ORTHO05D005737 4.4e-31 138.7 177 53.7
COL.COLO4_25354 Corchorus olitorius HOM05D004779 ORTHO05D005737 9.7e-31 137.5 195 48.2
Rhsim13G0199300 Rhododendron simsii HOM05D004779 ORTHO05D005737 9.7e-31 137.5 191 50.3
Ca_06128_v3 Cicer arietinum L. HOM05D004779 ORTHO05D005737 1.7e-30 136.7 173 50.9
vmacro04059 Vaccinium macrocarpon HOM05D004779 ORTHO05D005737 2.8e-30 136.0 190 49.5
CiPaw.13G125400 Carya illinoinensis HOM05D004779 ORTHO05D005737 1.1e-29 134.0 189 51.3
Phvul.008G210200 Phaseolus vulgaris HOM05D004779 ORTHO05D005737 1.8e-29 133.3 177 49.2
MSTRG.21000 Avicennia marina HOM05D004779 ORTHO05D005737 5.3e-29 131.7 191 48.2
HanXRQChr13g0420201 Helianthus annuus HOM05D004779 ORTHO05D005737 7.0e-29 131.3 188 51.6
CsaV3_1G004540 Cucumis sativus L. HOM05D004779 ORTHO05D005737 2.0e-28 129.8 179 49.7
Gorai.013G256500 Gossypium raimondii HOM05D004779 ORTHO05D005737 2.0e-28 129.8 192 46.9
AUR62001587 Chenopodium quinoa HOM05D004779 ORTHO05D005737 5.9e-28 128.3 179 49.7
Duzib168G2107 Durio zibethinus HOM05D004779 ORTHO05D005737 5.9e-28 128.3 190 46.8
AUR62020193 Chenopodium quinoa HOM05D004779 ORTHO05D005737 7.7e-28 127.9 194 47.4
Manes.11G104300 Manihot esculenta HOM05D004779 ORTHO05D005737 1.0e-27 127.5 184 50.5
Lsat_1_v5_gn_3_114561 Lactuca sativa HOM05D004779 ORTHO05D005737 1.3e-27 127.1 190 48.4
arahy.Tifrunner.gnm1.ann1.3IJ79N Arachis hypogaea HOM05D004779 ORTHO05D005737 1.7e-27 126.7 172 48.8
Gohir.D13G225700 Gossypium hirsutum HOM05D004779 ORTHO05D005737 2.2e-27 126.3 196 46.4
HanXRQChr03g0091061 Helianthus annuus HOM05D004779 ORTHO05D005737 2.9e-27 125.9 175 51.4
CANSAT54G2495 Cannabis sativa HOM05D004779 ORTHO05D005737 3.8e-27 125.6 188 49.5
arahy.Tifrunner.gnm1.ann1.GQ8P42 Arachis hypogaea HOM05D004779 ORTHO05D005737 5.0e-27 125.2 136 55.9
ClCG06G014140 Citrullus lanatus HOM05D004779 ORTHO05D005737 6.5e-27 124.8 179 47.5
TAR369G0205 Trochodendron aralioides HOM05D004779 ORTHO05D005737 8.5e-27 124.4 177 49.7
Sc06g0008600 Simmondsia chinensis HOM05D004779 ORTHO05D005737 1.1e-26 124.0 181 50.3
Lalb_Chr04g0249841 Lupinus albus HOM05D004779 ORTHO05D005737 1.5e-26 123.6 173 49.1
MELO3C017381.2 Cucumis melo HOM05D004779 ORTHO05D005737 1.9e-26 123.2 180 48.3
VMungo0647G2327 Vigna mungo HOM05D004779 ORTHO05D005737 5.5e-26 121.7 178 47.8
Atru.chr3.3301 Acer truncatum HOM05D004779 ORTHO05D005737 7.2e-26 121.3 182 51.6
Psat2g023720 Pisum sativum HOM05D004779 ORTHO05D005737 7.2e-26 121.3 158 50.0
FAN02G4109 Fragaria x ananassa HOM05D004779 ORTHO05D005737 1.6e-25 120.2 175 50.9
PGR119G0691 Punica granatum HOM05D004779 ORTHO05D005737 2.1e-25 119.8 190 43.7
Sed0007784 Sechium edule HOM05D004779 ORTHO05D005737 2.1e-25 119.8 180 46.1
Thecc.09G267300 Theobroma cacao HOM05D004779 ORTHO05D005737 2.1e-25 119.8 192 46.4
Actinidia12899 Actinidia chinensis HOM05D004779 ORTHO05D005737 4.7e-25 118.6 188 43.6
Migut.D02461 Erythranthe guttata HOM05D004779 ORTHO05D005737 6.1e-25 118.2 189 46.6
Lalb_Chr10g0105761 Lupinus albus HOM05D004779 ORTHO05D005737 8.0e-25 117.9 173 47.4
Sed0027738 Sechium edule HOM05D004779 ORTHO05D005737 8.0e-25 117.9 180 47.2
DCAR_012261 Daucus carota HOM05D004779 ORTHO05D005737 1.0e-24 117.5 176 49.4
TPR.G13298 Trifolium pratense HOM05D004779 ORTHO05D005737 8.8e-24 114.4 176 47.2
Cpa.g.sc103.54 Carica papaya HOM05D004779 ORTHO05D005737 1.1e-23 114.0 186 45.2
Eucgr.J00599 Eucalyptus grandis HOM05D004779 ORTHO05D005737 9.7e-23 110.9 191 46.6
Gohir.A07G114480 Gossypium hirsutum HOM05D004779 ORTHO05D005737 9.7e-23 110.9 184 45.1
Gohir.D07G118400 Gossypium hirsutum HOM05D004779 ORTHO05D005737 1.3e-22 110.5 182 45.6
Medtr5g086790 Medicago truncatula HOM05D004779 ORTHO05D005737 2.2e-22 109.8 174 47.7
Potri.009G155400 Populus trichocarpa HOM05D004779 ORTHO05D005737 2.2e-22 109.8 189 43.4
Ah.08g222510 Amaranthus hybridus HOM05D004779 ORTHO05D005737 4.8e-22 108.6 181 45.3
MSTRG.18803 Avicennia marina HOM05D004779 ORTHO05D005737 1.4e-21 107.1 188 39.9
THA.LOC104799595 Tarenaya hassleriana HOM05D004779 ORTHO05D005737 1.8e-21 106.7 190 46.3
EL10Ac7g16253 Beta vulgaris HOM05D004779 ORTHO05D005737 9.1e-21 104.4 176 46.0
Nitab4.5_0010066g0010 Nicotiana tabacum HOM05D004779 ORTHO05D005737 1.2e-20 104.0 71 78.9
Potri.004G193300 Populus trichocarpa HOM05D004779 ORTHO05D005737 2.6e-20 102.8 182 43.4
SGA_v2.0_scaffold7G04016 Striga asiatica HOM05D004779 ORTHO05D005737 3.5e-20 102.4 189 45.5
Gorai.001G127300 Gossypium raimondii HOM05D004779 ORTHO05D005737 5.9e-20 101.7 182 42.9
PSO384G0479 Papaver somniferum HOM05D004779 ORTHO05D005737 5.9e-20 101.7 178 42.7
Cfa005492 Carpinus fangiana HOM05D004779 ORTHO05D005737 1.3e-19 100.5 219 39.7
Aqoxy1G00564 Aquilegia oxysepala HOM05D004779 ORTHO05D005737 2.2e-19 99.8 177 42.4
CDE01G0526 Ceratophyllum demersum HOM05D004779 ORTHO05D005737 8.5e-19 97.8 175 44.6
Sabra09G0121800 Salix brachista HOM05D004779 ORTHO05D005737 1.1e-18 97.4 222 38.7
Migut.O00734 Erythranthe guttata HOM05D004779 ORTHO05D005737 1.5e-18 97.1 174 44.3
Oeu026350.1 Olea europaea HOM05D004779 ORTHO05D005737 1.5e-18 97.1 191 42.4
PSO339G0772 Papaver somniferum HOM05D004779 ORTHO05D005737 3.2e-18 95.9 181 41.4
Ciclev10027942m.g Citrus clementina HOM05D004779 ORTHO05D005737 9.4e-18 94.4 180 42.2
FAN21G1171 Fragaria x ananassa HOM05D004779 ORTHO05D005737 6.1e-17 91.7 149 47.0
Carub.0006s1924 Capsella rubella HOM05D004779 ORTHO05D005737 3.4e-15 85.9 184 39.1
CDE05G1310 Ceratophyllum demersum HOM05D004779 ORTHO05D005737 3.4e-15 85.9 164 42.7
THA.LOC104810971 Tarenaya hassleriana HOM05D004779 ORTHO05D005737 5.7e-15 85.1 186 41.4
AL6G32490 Arabidopsis lyrata HOM05D004779 ORTHO05D005737 1.7e-14 83.6 179 38.0
ATR0697G120 Amborella trichopoda HOM05D004779 ORTHO05D005737 2.8e-14 82.8 172 37.8
AT5G20930 Arabidopsis thaliana HOM05D004779 ORTHO05D005737 4.8e-14 82.0 187 38.5
A10p19090 Brassica napus HOM05D004779 ORTHO05D005737 3.1e-13 79.3 130 43.1
ECA240G3152 Erigeron canadensis HOM05D004779 ORTHO05D005737 5.4e-13 78.6 143 46.2
C02p10520 Brassica napus HOM05D004779 ORTHO05D005737 9.1e-13 77.8 180 37.8
BraA02t05604Z Brassica rapa HOM05D004779 ORTHO05D005737 9.1e-13 77.8 180 37.8
Sp6g23590 Schrenkiella parvula HOM05D004779 ORTHO05D005737 3.5e-12 75.9 184 38.0
BraA10t43988Z Brassica rapa HOM05D004779 ORTHO05D005737 1.7e-11 73.6 122 41.0
CARHR191920 Cardamine hirsuta HOM05D004779 ORTHO05D005737 2.2e-11 73.2 140 40.0
SEGI_33986 Sequoiadendron giganteum HOM05D004779 ORTHO05D005737 2.9e-11 72.8 173 37.6
Thhalv10012855m.g Eutrema salsugineum HOM05D004779 ORTHO05D005737 8.5e-11 71.2 191 35.6
Aa31LG1G13840 Aethionema arabicum HOM05D004779 ORTHO05D005737 3.2e-10 69.3 145 38.6
BolC9t58378H Brassica oleracea HOM05D004779 ORTHO05D005737 1.6e-09 67.0 170 34.7
HPP92_004176 Vanilla planifolia HOM05D004779 ORTHO05D005737 2.1e-09 66.6 176 35.8
BcaB05g22801 Brassica carinata HOM05D004779 ORTHO05D005737 3.6e-09 65.9 186 34.9
BcaC04g19491 Brassica carinata HOM05D004779 ORTHO05D005737 6.1e-09 65.1 163 38.7
C09p55170 Brassica napus HOM05D004779 ORTHO05D005737 6.1e-09 65.1 163 38.7
MBI05_g37654_MAGBIO Magnolia biondii HOM05D004779 ORTHO05D005737 2.3e-08 63.2 74 51.4
BNapus_Darmor_BZH_scaffold_38p01260 Brassica napus HOM05D004779 ORTHO05D005737 8.8e-08 61.2 181 33.1
BolC2t07083H Brassica oleracea HOM05D004779 ORTHO05D005737 1.5e-07 60.5 179 34.1
BcaC03g13814 Brassica carinata HOM05D004779 ORTHO05D005737 2.0e-07 60.1 180 35.0
QL01p018814 Quercus lobata HOM05D004779 ORTHO05D005737 4.4e-07 58.9 223 30.9
Zm00001eb214860 Zea mays HOM05D004779 ORTHO05D005737 5.7e-07 58.5 178 34.3
BcaB08g37316 Brassica carinata HOM05D004779 ORTHO05D005737 7.5e-07 58.2 166 32.5
SHI25305 Sapria himalayana HOM05D004779 ORTHO05D005737 1.7e-06 57.0 37 75.7


User provided reference genes

Program Settings