Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008408g0040 Nicotiana tabacum HOM05D004232 ORTHO05D004909 1.7e-102 375.9 185 100.0
Nitab4.5_0011109g0010 Nicotiana tabacum HOM05D004232 ORTHO05D004909 2.8e-76 288.9 215 72.6
Nitab4.5_0010824g0020 Nicotiana tabacum HOM05D004232 ORTHO05D004909 2.1e-63 246.1 216 63.9
Nitab4.5_0000660g0030 Nicotiana tabacum HOM05D004232 ORTHO05D004909 1.3e-54 216.9 162 72.2
Peaxi162Scf00155g00514 Petunia axillaris HOM05D004232 ORTHO05D004909 4.3e-53 211.8 216 55.1
Nitab4.5_0000843g0060 Nicotiana tabacum HOM05D004232 ORTHO05D004909 1.8e-35 153.3 159 56.6
Lsat_1_v5_gn_8_77581 Lactuca sativa HOM05D004232 ORTHO05D004909 2.2e-28 129.8 194 39.2
Lj9A711T51 Lonicera japonica HOM05D004232 ORTHO05D004909 7.0e-27 124.8 170 45.3
Dinv41413 Davidia involucrata HOM05D004232 ORTHO05D004909 1.6e-26 123.6 159 45.3
Solyc02g014460.4 Solanum lycopersicum HOM05D004232 ORTHO05D004909 2.6e-26 122.9 159 42.8
Actinidia04264 Actinidia chinensis HOM05D004232 ORTHO05D004909 3.5e-26 122.5 177 42.9
Sopen02g003100 Solanum pennellii HOM05D004232 ORTHO05D004909 3.5e-26 122.5 159 42.8
Nitab4.5_0000700g0080 Nicotiana tabacum HOM05D004232 ORTHO05D004909 4.5e-26 122.1 159 42.1
Dinv42900 Davidia involucrata HOM05D004232 ORTHO05D004909 5.9e-26 121.7 159 43.4
Dinv43201 Davidia involucrata HOM05D004232 ORTHO05D004909 5.9e-26 121.7 159 43.4
Actinidia04270 Actinidia chinensis HOM05D004232 ORTHO05D004909 1.3e-25 120.6 177 42.4
PGSC0003DMG400023181 Solanum tuberosum HOM05D004232 ORTHO05D004909 2.2e-25 119.8 159 41.5
Nitab4.5_0000059g0500 Nicotiana tabacum HOM05D004232 ORTHO05D004909 8.5e-25 117.9 159 41.5
PGR142G1232 Punica granatum HOM05D004232 ORTHO05D004909 1.1e-24 117.5 171 37.4
Sed0012168 Sechium edule HOM05D004232 ORTHO05D004909 1.1e-24 117.5 175 40.6
Peaxi162Scf00113g00410 Petunia axillaris HOM05D004232 ORTHO05D004909 1.9e-24 116.7 159 40.9
CSS0034823 Camellia sinensis var. sinensis HOM05D004232 ORTHO05D004909 2.5e-24 116.3 159 43.4
ECA236G3428 Erigeron canadensis HOM05D004232 ORTHO05D004909 4.2e-24 115.5 159 40.3
Rhsim01G0048800 Rhododendron simsii HOM05D004232 ORTHO05D004909 5.5e-24 115.2 159 40.9
HPP92_023808 Vanilla planifolia HOM05D004232 ORTHO05D004909 5.5e-24 115.2 157 40.8
DCAR_019365 Daucus carota HOM05D004232 ORTHO05D004909 7.2e-24 114.8 175 40.0
CSS0000460 Camellia sinensis var. sinensis HOM05D004232 ORTHO05D004909 9.4e-24 114.4 159 42.8
MD15G1157400 Malus domestica HOM05D004232 ORTHO05D004909 9.4e-24 114.4 159 40.9
Sc08g0005080 Simmondsia chinensis HOM05D004232 ORTHO05D004909 1.6e-23 113.6 193 37.8
CsaV3_1G028610 Cucumis sativus L. HOM05D004232 ORTHO05D004909 2.7e-23 112.8 176 40.3
Ciclev10007957m.g Citrus clementina HOM05D004232 ORTHO05D004909 3.6e-23 112.5 183 37.7
COL.COLO4_18748 Corchorus olitorius HOM05D004232 ORTHO05D004909 4.7e-23 112.1 159 38.4
TAR625G0697 Trochodendron aralioides HOM05D004232 ORTHO05D004909 6.1e-23 111.7 163 41.7
ClCG06G012120 Citrullus lanatus HOM05D004232 ORTHO05D004909 8.0e-23 111.3 154 44.2
Thecc.09G036600 Theobroma cacao HOM05D004232 ORTHO05D004909 8.0e-23 111.3 173 38.2
MELO3C010252.2 Cucumis melo HOM05D004232 ORTHO05D004909 1.0e-22 110.9 176 39.8
Eucgr.C00403 Eucalyptus grandis HOM05D004232 ORTHO05D004909 1.0e-22 110.9 159 39.0
Gorai.010G111300 Gossypium raimondii HOM05D004232 ORTHO05D004909 1.0e-22 110.9 174 39.1
TPR.G15784 Trifolium pratense HOM05D004232 ORTHO05D004909 1.4e-22 110.5 185 36.8
VMungo1215G2079 Vigna mungo HOM05D004232 ORTHO05D004909 1.4e-22 110.5 205 35.1
CiPaw.15G171200 Carya illinoinensis HOM05D004232 ORTHO05D004909 1.8e-22 110.2 160 40.6
Ca_21603_v3 Cicer arietinum L. HOM05D004232 ORTHO05D004909 1.8e-22 110.2 177 36.2
Medtr4g116900 Medicago truncatula HOM05D004232 ORTHO05D004909 1.8e-22 110.2 183 35.5
Sabra18G0095700 Salix brachista HOM05D004232 ORTHO05D004909 1.8e-22 110.2 160 38.1
vmacro21873 Vaccinium macrocarpon HOM05D004232 ORTHO05D004909 2.3e-22 109.8 160 41.2
Rhsim01G0048600 Rhododendron simsii HOM05D004232 ORTHO05D004909 3.0e-22 109.4 159 40.3
Rhsim01G0048700 Rhododendron simsii HOM05D004232 ORTHO05D004909 3.0e-22 109.4 159 40.3
AL2G40720 Arabidopsis lyrata HOM05D004232 ORTHO05D004909 4.0e-22 109.0 173 38.2
Gohir.D06G096600 Gossypium hirsutum HOM05D004232 ORTHO05D004909 4.0e-22 109.0 174 38.5
THA.LOC104808932 Tarenaya hassleriana HOM05D004232 ORTHO05D004909 4.0e-22 109.0 170 37.1
QL02p091766 Quercus lobata HOM05D004232 ORTHO05D004909 5.2e-22 108.6 160 40.6
AT1G80710 Arabidopsis thaliana HOM05D004232 ORTHO05D004909 8.8e-22 107.8 171 36.8
Gohir.A06G096400 Gossypium hirsutum HOM05D004232 ORTHO05D004909 8.8e-22 107.8 174 38.5
CARHR073790 Cardamine hirsuta HOM05D004232 ORTHO05D004909 1.5e-21 107.1 182 37.9
Lsat_1_v5_gn_8_59400 Lactuca sativa HOM05D004232 ORTHO05D004909 1.5e-21 107.1 159 40.9
MD02G1011700 Malus domestica HOM05D004232 ORTHO05D004909 2.0e-21 106.7 159 39.0
Cfa020866 Carpinus fangiana HOM05D004232 ORTHO05D004909 2.6e-21 106.3 159 40.3
Lalb_Chr07g0179621 Lupinus albus HOM05D004232 ORTHO05D004909 2.6e-21 106.3 159 37.7
Rhsim01G0048900 Rhododendron simsii HOM05D004232 ORTHO05D004909 2.6e-21 106.3 159 37.7
Nn8g39758 Nelumbo nucifera HOM05D004232 ORTHO05D004909 3.3e-21 105.9 154 40.9
Potri.018G112500 Populus trichocarpa HOM05D004232 ORTHO05D004909 4.4e-21 105.5 182 34.6
arahy.Tifrunner.gnm1.ann1.TW5YT9 Arachis hypogaea HOM05D004232 ORTHO05D004909 5.7e-21 105.1 160 37.5
FAN23G0432 Fragaria x ananassa HOM05D004232 ORTHO05D004909 5.7e-21 105.1 159 35.2
C06p53760 Brassica napus HOM05D004232 ORTHO05D004909 9.7e-21 104.4 192 37.0
Migut.K00358 Erythranthe guttata HOM05D004232 ORTHO05D004909 9.7e-21 104.4 192 35.9
Lj4g0017422 Lotus japonicus HOM05D004232 ORTHO05D004909 9.7e-21 104.4 160 38.1
MSTRG.26306 Avicennia marina HOM05D004232 ORTHO05D004909 1.7e-20 103.6 159 37.7
Glyma.13G156200 Glycine max HOM05D004232 ORTHO05D004909 2.8e-20 102.8 171 36.8
HanXRQChr05g0141511 Helianthus annuus HOM05D004232 ORTHO05D004909 2.8e-20 102.8 159 37.7
FAN26G2384 Fragaria x ananassa HOM05D004232 ORTHO05D004909 3.7e-20 102.4 159 35.2
Hund21619 Selenicereus undatus HOM05D004232 ORTHO05D004909 3.7e-20 102.4 166 33.1
FvH4_1g01460 Fragaria vesca HOM05D004232 ORTHO05D004909 4.8e-20 102.1 159 35.2
FAN19G1911 Fragaria x ananassa HOM05D004232 ORTHO05D004909 4.8e-20 102.1 159 35.2
FAN28G1469 Fragaria x ananassa HOM05D004232 ORTHO05D004909 4.8e-20 102.1 159 35.2
Sp5g35040 Schrenkiella parvula HOM05D004232 ORTHO05D004909 4.8e-20 102.1 154 40.3
Duzib168G1849 Durio zibethinus HOM05D004232 ORTHO05D004909 8.2e-20 101.3 157 36.3
Thhalv10018400m.g Eutrema salsugineum HOM05D004232 ORTHO05D004909 8.2e-20 101.3 154 39.6
HanXRQChr12g0386031 Helianthus annuus HOM05D004232 ORTHO05D004909 1.1e-19 100.9 165 33.9
Phvul.003G175900 Phaseolus vulgaris HOM05D004232 ORTHO05D004909 1.1e-19 100.9 204 32.4
GSVIVG01001050001 Vitis vinifera HOM05D004232 ORTHO05D004909 1.1e-19 100.9 216 32.4
ATR0629G133 Amborella trichopoda HOM05D004232 ORTHO05D004909 1.4e-19 100.5 170 35.9
BcaC08g47551 Brassica carinata HOM05D004232 ORTHO05D004909 1.8e-19 100.1 174 37.4
BolC6t40394H Brassica oleracea HOM05D004232 ORTHO05D004909 1.8e-19 100.1 174 37.4
arahy.Tifrunner.gnm1.ann1.BI9JLD Arachis hypogaea HOM05D004232 ORTHO05D004909 2.4e-19 99.8 160 36.9
BraA07t32003Z Brassica rapa HOM05D004232 ORTHO05D004909 3.1e-19 99.4 156 39.1
Aa31LG1G2250 Aethionema arabicum HOM05D004232 ORTHO05D004909 4.1e-19 99.0 178 34.8
Haze_19292 Corylus avellana HOM05D004232 ORTHO05D004909 4.1e-19 99.0 179 35.8
RcHm_v2.0_Chr2g0086391 Rosa chinensis HOM05D004232 ORTHO05D004909 5.3e-19 98.6 159 34.6
Aqoxy7G03502 Aquilegia oxysepala HOM05D004232 ORTHO05D004909 9.1e-19 97.8 193 34.2
Carub.0002s2684 Capsella rubella HOM05D004232 ORTHO05D004909 9.1e-19 97.8 206 33.0
Ah.06g190350 Amaranthus hybridus HOM05D004232 ORTHO05D001990 1.2e-18 97.4 157 35.0
ECA236G0371 Erigeron canadensis HOM05D004232 ORTHO05D004909 1.2e-18 97.4 162 35.2
Nn2g12267 Nelumbo nucifera HOM05D004232 ORTHO05D004909 4.5e-18 95.5 180 36.1
SEGI_24126 Sequoiadendron giganteum HOM05D004232 ORTHO05D004909 4.5e-18 95.5 153 35.9
TWI34G2022 Tripterygium wilfordii HOM05D004232 ORTHO05D004909 4.5e-18 95.5 178 36.0
AUR62000901 Chenopodium quinoa HOM05D004232 ORTHO05D004909 7.7e-18 94.7 156 34.0
ECA234G1449 Erigeron canadensis HOM05D004232 ORTHO05D004909 7.7e-18 94.7 155 34.8
CANSAT11G0555 Cannabis sativa HOM05D004232 ORTHO05D004909 1.0e-17 94.4 158 34.2
Atru.chr7.187 Acer truncatum HOM05D004232 ORTHO05D004909 1.7e-17 93.6 215 32.1
A07p44980 Brassica napus HOM05D004232 ORTHO05D004909 1.7e-17 93.6 157 37.6
SEGI_07783 Sequoiadendron giganteum HOM05D004232 ORTHO05D004909 1.7e-17 93.6 172 33.7
unitig_52.g17569 Utricularia gibba HOM05D004232 ORTHO05D004909 1.7e-17 93.6 162 37.0
Cc06_g23400 Coffea canephora HOM05D004232 ORTHO05D004909 2.2e-17 93.2 159 34.6
Cc06_g23430 Coffea canephora HOM05D004232 ORTHO05D004909 2.2e-17 93.2 159 32.7
BcaC08g47552 Brassica carinata HOM05D004232 ORTHO05D004909 6.5e-17 91.7 154 37.0
TWI63G0539 Tripterygium wilfordii HOM05D004232 ORTHO05D004909 8.5e-17 91.3 195 31.8
C09p21710 Brassica napus HOM05D004232 ORTHO05D004909 1.1e-16 90.9 164 32.3
BolC9t55076H Brassica oleracea HOM05D004232 ORTHO05D004909 1.1e-16 90.9 164 32.3
CARHR073800 Cardamine hirsuta HOM05D004232 ORTHO05D004909 1.9e-16 90.1 156 34.6
PSO063G1432 Papaver somniferum HOM05D004232 ORTHO05D004909 3.2e-16 89.4 190 33.2
Aqoxy7G03504 Aquilegia oxysepala HOM05D004232 ORTHO05D004909 4.2e-16 89.0 152 36.8
COL.COLO4_17524 Corchorus olitorius HOM05D004232 ORTHO05D004909 4.2e-16 89.0 142 37.3
SGA_v2.0_scaffold387G50524 Striga asiatica HOM05D004232 ORTHO05D004909 7.2e-16 88.2 103 44.7
BcaC04g22248 Brassica carinata HOM05D004232 ORTHO05D004909 9.4e-16 87.8 164 32.3
BolC6t40395H Brassica oleracea HOM05D004232 ORTHO05D004909 9.4e-16 87.8 157 35.0
Manes.06G039700 Manihot esculenta HOM05D004232 ORTHO05D004909 8.0e-15 84.7 207 31.9
Gohir.A06G096200 Gossypium hirsutum HOM05D004232 ORTHO05D004909 1.8e-14 83.6 157 34.4
TPR.G15793 Trifolium pratense HOM05D004232 ORTHO05D004909 3.0e-14 82.8 170 32.4
AUR62005074 Chenopodium quinoa HOM05D004232 ORTHO05D004909 6.8e-14 81.6 137 32.8
Gorai.010G111100 Gossypium raimondii HOM05D004232 ORTHO05D004909 8.8e-14 81.3 144 36.8
Zm00001eb028210 Zea mays HOM05D004232 ORTHO05D004909 8.8e-14 81.3 158 34.8
SMO364G0327 Selaginella moellendorffii HOM05D004232 ORTHO05D004909 2.0e-13 80.1 154 29.2
Medtr4g116910 Medicago truncatula HOM05D004232 ORTHO05D004909 2.6e-13 79.7 171 31.6
Os08g0282500 Oryza sativa ssp. japonica HOM05D004232 ORTHO05D004909 8.3e-12 74.7 157 31.8
Gohir.D06G096401 Gossypium hirsutum HOM05D004232 ORTHO05D004909 5.9e-10 68.6 140 32.1
Ah.12g062460 Amaranthus hybridus HOM05D004232 ORTHO05D004909 7.7e-10 68.2 85 37.6
CSS0018310 Camellia sinensis var. sinensis HOM05D004232 ORTHO05D004909 3.8e-09 65.9 89 40.4
CSS0031603 Camellia sinensis var. sinensis HOM05D004232 ORTHO05D004909 3.8e-09 65.9 89 40.4
Rhsim01G0048400 Rhododendron simsii HOM05D004232 ORTHO05D004909 3.2e-08 62.8 142 30.3
A09p17420 Brassica napus HOM05D004232 ORTHO05D004909 4.2e-08 62.4 133 30.1
QL05p008018 Quercus lobata HOM05D000129 ORTHO05D004909 4.7e-07 58.9 118 35.6


User provided reference genes

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