Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008379g0020 Nicotiana tabacum HOM05D000707 ORTHO05D001462 3.1e-48 194.9 105 100.0
Peaxi162Scf00007g01220 Petunia axillaris HOM05D000707 ORTHO05D001462 2.7e-28 128.6 93 77.4
Peaxi162Scf00012g03214 Petunia axillaris HOM05D000707 ORTHO05D001462 2.1e-20 102.4 94 67.0
Nitab4.5_0000780g0020 Nicotiana tabacum HOM05D000707 ORTHO05D001462 4.7e-20 101.3 84 69.0
Nitab4.5_0000006g0010 Nicotiana tabacum HOM05D000707 ORTHO05D001462 6.8e-19 97.4 93 66.7
Peaxi162Scf00416g00214 Petunia axillaris HOM05D000707 ORTHO05D001462 1.5e-18 96.3 93 68.8
CAN.G387.2 Capsicum annuum HOM05D000707 ORTHO05D001462 2.8e-17 92.0 85 64.7
Cc05_g05160 Coffea canephora HOM05D000707 ORTHO05D001462 3.7e-17 91.7 95 63.2
Rhsim06G0157800 Rhododendron simsii HOM05D000707 ORTHO05D001462 6.3e-17 90.9 94 60.6
PGSC0003DMG400001263 Solanum tuberosum HOM05D000707 ORTHO05D001462 9.1e-16 87.0 85 65.9
CSS0038806 Camellia sinensis var. sinensis HOM05D000707 ORTHO05D001462 1.6e-15 86.3 93 60.2
Solyc05g046040.2 Solanum lycopersicum HOM05D000707 ORTHO05D001462 2.7e-15 85.5 85 64.7
Sopen05g027290 Solanum pennellii HOM05D000707 ORTHO05D001462 2.7e-15 85.5 85 64.7
Lj8C122T16 Lonicera japonica HOM05D000707 ORTHO05D001462 3.5e-15 85.1 94 55.3
vmacro12230 Vaccinium macrocarpon HOM05D000707 ORTHO05D001462 4.2e-13 78.2 94 56.4
Nitab4.5_0001176g0180 Nicotiana tabacum HOM05D000707 ORTHO05D001462 7.2e-13 77.4 55 76.4
Actinidia24274 Actinidia chinensis HOM05D000707 ORTHO05D001462 1.6e-12 76.3 93 54.8
QL08p033891 Quercus lobata HOM05D000707 ORTHO05D001462 1.6e-12 76.3 94 53.2
Cpa.g.sc8.239 Carica papaya HOM05D000707 ORTHO05D001462 2.1e-12 75.9 94 54.3
CiPaw.04G118100 Carya illinoinensis HOM05D000707 ORTHO05D001462 2.7e-12 75.5 94 51.1
Ciclev10015305m.g Citrus clementina HOM05D000707 ORTHO05D001462 3.6e-12 75.1 94 52.1
Dinv18532 Davidia involucrata HOM05D000707 ORTHO05D001462 3.6e-12 75.1 94 57.4
Haze_12902 Corylus avellana HOM05D000707 ORTHO05D001462 4.7e-12 74.7 94 52.1
Atru.chr6.3139 Acer truncatum HOM05D000707 ORTHO05D001462 6.1e-12 74.3 94 55.3
ClCG02G008420 Citrullus lanatus HOM05D000707 ORTHO05D001462 6.1e-12 74.3 91 57.1
Cfa014441 Carpinus fangiana HOM05D000707 ORTHO05D001462 8.0e-12 73.9 94 52.1
TAR624G0679 Trochodendron aralioides HOM05D000707 ORTHO05D001462 2.3e-11 72.4 94 48.9
Hma1.2p1_0439F.1_g153160 Hydrangea macrophylla HOM05D000707 ORTHO05D001462 4.0e-11 71.6 94 55.3
Eucgr.A01723 Eucalyptus grandis HOM05D000707 ORTHO05D001462 5.2e-11 71.2 94 52.1
Manes.13G091300 Manihot esculenta HOM05D000707 ORTHO05D001462 5.2e-11 71.2 96 53.1
TAR629G3252 Trochodendron aralioides HOM05D000707 ORTHO05D001462 1.2e-10 70.1 93 51.6
VMungo1080G1019 Vigna mungo HOM05D000707 ORTHO05D001462 2.0e-10 69.3 94 48.9
COL.COLO4_12998 Corchorus olitorius HOM05D000707 ORTHO05D001462 5.7e-10 67.8 95 49.5
Manes.13G073500 Manihot esculenta HOM05D000707 ORTHO05D001462 7.5e-10 67.4 96 51.0
Hma1.2p1_0613F.1_g189220 Hydrangea macrophylla HOM05D000707 ORTHO05D001462 9.8e-10 67.0 94 53.2
Prupe.3G220900 Prunus persica HOM05D000707 ORTHO05D001462 2.8e-09 65.5 92 46.7
CsaV3_2G035220 Cucumis sativus L. HOM05D000707 ORTHO05D001462 3.7e-09 65.1 91 53.8
MBI18_g37308_MAGBIO Magnolia biondii HOM05D000707 ORTHO05D001462 3.7e-09 65.1 94 48.9
TWI18G0317 Tripterygium wilfordii HOM05D000707 ORTHO05D001462 3.7e-09 65.1 96 45.8
Lsat_1_v5_gn_4_68520 Lactuca sativa HOM05D000707 ORTHO05D001462 6.3e-09 64.3 94 53.2
Lalb_Chr01g0005531 Lupinus albus HOM05D000707 ORTHO05D001462 6.3e-09 64.3 94 45.7
Thecc.02G162700 Theobroma cacao HOM05D000707 ORTHO05D001462 8.3e-09 63.9 94 46.8
MELO3C019232.2 Cucumis melo HOM05D000707 ORTHO05D001462 1.4e-08 63.2 91 52.7
Potri.017G039301 Populus trichocarpa HOM05D000707 ORTHO05D001462 1.4e-08 63.2 97 49.5
CAN.G80.17 Capsicum annuum HOM05D000707 ORTHO05D001462 2.4e-08 62.4 92 46.7
Sed0003572 Sechium edule HOM05D000707 ORTHO05D001462 2.4e-08 62.4 92 47.8
vmacro09323 Vaccinium macrocarpon HOM05D000707 ORTHO05D001462 3.1e-08 62.0 94 54.3
Phvul.005G113300 Phaseolus vulgaris HOM05D000707 ORTHO05D001462 4.1e-08 61.6 94 45.7
Rhsim04G0056700 Rhododendron simsii HOM05D000707 ORTHO05D001462 9.2e-08 60.5 94 52.1
Manes.13G073566 Manihot esculenta HOM05D000707 ORTHO05D001462 1.6e-07 59.7 90 48.9
Gorai.013G071300 Gossypium raimondii HOM05D000707 ORTHO05D001462 2.0e-07 59.3 92 45.7
DCAR_021189 Daucus carota HOM05D000707 ORTHO05D001462 2.7e-07 58.9 94 44.7
MBI18_g03306_MAGBIO Magnolia biondii HOM05D000707 ORTHO05D001462 2.7e-07 58.9 94 45.7
Nn1g06992 Nelumbo nucifera HOM05D000707 ORTHO05D001462 2.7e-07 58.9 93 48.4
Actinidia30507 Actinidia chinensis HOM05D000707 ORTHO05D001462 3.5e-07 58.5 94 48.9
Gohir.D13G062900 Gossypium hirsutum HOM05D000707 ORTHO05D001462 3.5e-07 58.5 92 45.7
Potri.007G121200 Populus trichocarpa HOM05D000707 ORTHO05D001462 4.5e-07 58.2 97 49.5
Nitab4.5_0007865g0010 Nicotiana tabacum HOM05D000707 ORTHO05D001462 5.9e-07 57.8 64 54.7
Rhsim04G0056800 Rhododendron simsii HOM05D000707 ORTHO05D001462 7.7e-07 57.4 94 51.1
Sabra17G0026300 Salix brachista HOM05D000707 ORTHO05D001462 1.7e-06 56.2 95 47.4
Sed0013279 Sechium edule HOM05D000707 ORTHO05D001462 2.3e-06 55.8 93 47.3
PGR083G0349 Punica granatum HOM05D000707 ORTHO05D001462 3.8e-06 55.1 104 45.2
Nitab4.5_0001302g0080 Nicotiana tabacum HOM05D000707 ORTHO05D001462 5.0e-06 54.7 55 60.0
Glyma.13G306400 Glycine max HOM05D000707 ORTHO05D001462 6.6e-06 54.3 84 40.5
CANSAT64G2905 Cannabis sativa HOM05D000707 ORTHO05D001462 8.6e-06 53.9 95 46.3


User provided reference genes

Program Settings