Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008370g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 4.4e-155 551.2 272 100.0
Nitab4.5_0000212g0270 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.1e-60 237.7 122 96.7
Peaxi162Scf00991g00013 Petunia axillaris HOM05D005465 ORTHO05D006612 5.2e-55 218.8 122 86.9
Solyc10g082064.1 Solanum lycopersicum HOM05D005465 ORTHO05D006612 2.0e-54 216.9 122 86.9
PGSC0003DMG400026569 Solanum tuberosum HOM05D005465 ORTHO05D006612 4.4e-54 215.7 122 86.1
SGA_v2.0_scaffold4G02379 Striga asiatica HOM05D005465 ORTHO05D006612 2.7e-51 206.5 122 83.6
Actinidia26253 Actinidia chinensis HOM05D005465 ORTHO05D006612 7.8e-51 204.9 122 80.3
Nitab4.5_0010535g0020 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.7e-50 203.8 122 77.9
CSS0002198 Camellia sinensis var. sinensis HOM05D005465 ORTHO05D006612 3.9e-50 202.6 122 77.0
SGA_v2.0_scaffold52G19131 Striga asiatica HOM05D005465 ORTHO05D006612 3.9e-50 202.6 122 81.1
Nitab4.5_0005910g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.5e-49 200.7 123 79.7
Hma1.2p1_0481F.1_g162260 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 1.9e-49 200.3 122 78.7
Hma1.2p1_0481F.1_g162270 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 1.9e-49 200.3 122 78.7
Solyc02g088930.4 Solanum lycopersicum HOM05D005465 ORTHO05D006612 5.6e-49 198.7 132 72.7
PGSC0003DMG400001360 Solanum tuberosum HOM05D005465 ORTHO05D006612 1.6e-48 197.2 122 77.9
Sopen02g033620 Solanum pennellii HOM05D005465 ORTHO05D006612 2.1e-48 196.8 122 77.0
Manes.06G083500 Manihot esculenta HOM05D005465 ORTHO05D006612 3.6e-48 196.1 120 79.2
Nn3g17466 Nelumbo nucifera HOM05D005465 ORTHO05D006612 4.7e-48 195.7 121 77.7
ECA232G0503 Erigeron canadensis HOM05D005465 ORTHO05D006612 6.2e-48 195.3 122 78.7
Thecc.03G103400 Theobroma cacao HOM05D005465 ORTHO05D006612 8.1e-48 194.9 119 79.0
Nn4g23446 Nelumbo nucifera HOM05D005465 ORTHO05D006612 2.3e-47 193.4 121 76.9
DCAR_011037 Daucus carota HOM05D005465 ORTHO05D006612 3.1e-47 193.0 123 78.9
Duzib205G0879 Durio zibethinus HOM05D005465 ORTHO05D006612 3.1e-47 193.0 121 76.0
Rhsim08G0075200 Rhododendron simsii HOM05D005465 ORTHO05D006612 4.0e-47 192.6 122 76.2
ClCG04G011730 Citrullus lanatus HOM05D005465 ORTHO05D006612 8.9e-47 191.4 122 76.2
Cc07_g04290 Coffea canephora HOM05D005465 ORTHO05D006612 1.2e-46 191.0 120 75.8
Gohir.D03G097000 Gossypium hirsutum HOM05D005465 ORTHO05D006612 1.5e-46 190.7 121 76.0
Gorai.003G101800 Gossypium raimondii HOM05D005465 ORTHO05D006612 1.5e-46 190.7 121 76.0
unitig_899.g15102 Utricularia gibba HOM05D005465 ORTHO05D006612 2.0e-46 190.3 118 78.0
Duzib084G0509 Durio zibethinus HOM05D005465 ORTHO05D006612 2.6e-46 189.9 121 76.0
Lsat_1_v5_gn_4_171900 Lactuca sativa HOM05D005465 ORTHO05D006612 2.6e-46 189.9 122 75.4
Gohir.A03G070600 Gossypium hirsutum HOM05D005465 ORTHO05D006612 3.4e-46 189.5 121 75.2
TWI81G0357 Tripterygium wilfordii HOM05D005465 ORTHO05D006612 7.5e-46 188.3 122 74.6
TAR622G0582 Trochodendron aralioides HOM05D005465 ORTHO05D006612 7.5e-46 188.3 121 72.7
PGSC0003DMG400035500 Solanum tuberosum HOM05D005465 ORTHO05D006612 1.3e-45 187.6 117 77.8
PGR044G0931 Punica granatum HOM05D005465 ORTHO05D006612 1.7e-45 187.2 123 78.9
COL.COLO4_24335 Corchorus olitorius HOM05D005465 ORTHO05D006612 2.9e-45 186.4 121 74.4
Atru.chr9.555 Acer truncatum HOM05D005465 ORTHO05D006612 6.4e-45 185.3 121 72.7
MELO3C002037.2 Cucumis melo HOM05D005465 ORTHO05D006612 8.3e-45 184.9 122 72.1
Gorai.006G268200 Gossypium raimondii HOM05D005465 ORTHO05D006612 1.1e-44 184.5 121 74.4
VMungo1215G2862 Vigna mungo HOM05D005465 ORTHO05D006612 1.4e-44 184.1 120 75.0
PSO063G4354 Papaver somniferum HOM05D005465 ORTHO05D006612 2.4e-44 183.3 121 72.7
PSO782G3842 Papaver somniferum HOM05D005465 ORTHO05D006612 2.4e-44 183.3 121 71.1
Peaxi162Scf00166g00046 Petunia axillaris HOM05D005465 ORTHO05D006612 2.4e-44 183.3 124 74.2
Migut.H00618 Erythranthe guttata HOM05D005465 ORTHO05D006612 3.2e-44 183.0 122 73.0
CsaV3_1G006060 Cucumis sativus L. HOM05D005465 ORTHO05D006612 4.1e-44 182.6 122 71.3
MD06G1226100 Malus domestica HOM05D005465 ORTHO05D006612 9.2e-44 181.4 122 76.2
RcHm_v2.0_Chr7g0183221 Rosa chinensis HOM05D005465 ORTHO05D006612 9.2e-44 181.4 122 73.8
Aqoxy3G03677 Aquilegia oxysepala HOM05D005465 ORTHO05D006612 1.2e-43 181.0 122 69.7
Sc14g0006350 Simmondsia chinensis HOM05D005465 ORTHO05D006612 2.1e-43 180.3 117 76.1
Prupe.5G206300 Prunus persica HOM05D005465 ORTHO05D006612 2.7e-43 179.9 123 74.0
Ah.10g032300 Amaranthus hybridus HOM05D005465 ORTHO05D006612 3.5e-43 179.5 120 71.7
FvH4_5g13720 Fragaria vesca HOM05D005465 ORTHO05D006612 4.6e-43 179.1 122 72.1
FAN18G4042 Fragaria x ananassa HOM05D005465 ORTHO05D006612 4.6e-43 179.1 122 72.1
Glyma.17G079700 Glycine max HOM05D005465 ORTHO05D006612 1.7e-42 177.2 120 71.7
FAN13G0353 Fragaria x ananassa HOM05D005465 ORTHO05D006612 2.3e-42 176.8 122 71.3
CiPaw.11G054700 Carya illinoinensis HOM05D005465 ORTHO05D006612 3.0e-42 176.4 122 70.5
Sed0023287 Sechium edule HOM05D005465 ORTHO05D006612 3.0e-42 176.4 122 69.7
Cfa019348 Carpinus fangiana HOM05D005465 ORTHO05D006612 5.1e-42 175.6 122 69.7
TAR371G0638 Trochodendron aralioides HOM05D005465 ORTHO05D006612 6.6e-42 175.3 121 70.2
Haze_07739 Corylus avellana HOM05D005465 ORTHO05D006612 8.6e-42 174.9 122 69.7
arahy.Tifrunner.gnm1.ann1.13IMLW Arachis hypogaea HOM05D005465 ORTHO05D006612 1.5e-41 174.1 120 70.0
Ciclev10022497m.g Citrus clementina HOM05D005465 ORTHO05D006612 1.9e-41 173.7 120 69.2
MD14G1213000 Malus domestica HOM05D005465 ORTHO05D006612 2.5e-41 173.3 122 71.3
Glyma.05G020100 Glycine max HOM05D005465 ORTHO05D006612 3.3e-41 172.9 120 70.0
Potri.004G123700 Populus trichocarpa HOM05D005465 ORTHO05D006612 5.6e-41 172.2 123 71.5
Dinv34936 Davidia involucrata HOM05D005465 ORTHO05D006612 7.3e-41 171.8 103 79.6
Phvul.003G183800 Phaseolus vulgaris HOM05D005465 ORTHO05D006612 1.6e-40 170.6 120 69.2
Oeu062167.1 Olea europaea HOM05D005465 ORTHO05D006612 2.8e-40 169.9 122 70.5
Cpa.g.sc746.2 Carica papaya HOM05D005465 ORTHO05D006612 6.2e-40 168.7 120 65.8
QL10p019840 Quercus lobata HOM05D005465 ORTHO05D006612 6.2e-40 168.7 118 66.1
Rhsim10G0048500 Rhododendron simsii HOM05D005465 ORTHO05D006612 3.1e-39 166.4 122 63.9
TPR.G2036 Trifolium pratense HOM05D005465 ORTHO05D006612 4.0e-39 166.0 122 63.1
Rhsim10G0047800 Rhododendron simsii HOM05D005465 ORTHO05D006612 5.2e-39 165.6 122 63.9
AUR62038681 Chenopodium quinoa HOM05D005465 ORTHO05D006612 8.9e-39 164.9 120 65.0
AUR62018194 Chenopodium quinoa HOM05D005465 ORTHO05D006612 1.2e-38 164.5 120 65.8
Eucgr.K02534 Eucalyptus grandis HOM05D005465 ORTHO05D006612 2.0e-38 163.7 116 68.1
Psat4g047600 Pisum sativum HOM05D005465 ORTHO05D006612 2.6e-38 163.3 122 64.8
Lalb_Chr13g0302801 Lupinus albus HOM05D005465 ORTHO05D006612 3.4e-38 162.9 119 66.4
EL10Ac2g03144 Beta vulgaris HOM05D005465 ORTHO05D006612 5.8e-38 162.2 122 65.6
DCAR_025436 Daucus carota HOM05D005465 ORTHO05D006612 5.8e-38 162.2 124 65.3
Lj4g0014841 Lotus japonicus HOM05D005465 ORTHO05D006612 7.6e-38 161.8 120 68.3
Ca_21764_v3 Cicer arietinum L. HOM05D005465 ORTHO05D006612 1.3e-37 161.0 122 62.3
Sabra04G0090300 Salix brachista HOM05D005465 ORTHO05D006612 1.3e-37 161.0 123 67.5
THA.LOC104801135 Tarenaya hassleriana HOM05D005465 ORTHO05D006612 1.3e-37 161.0 122 67.2
Medtr4g109650 Medicago truncatula HOM05D005465 ORTHO05D006612 1.7e-37 160.6 122 63.1
MBI16_g10835_MAGBIO Magnolia biondii HOM05D005465 ORTHO05D006612 2.9e-37 159.8 121 62.8
BcaB01g05639 Brassica carinata HOM05D005465 ORTHO05D006612 6.4e-37 158.7 123 65.9
Gohir.D09G244200 Gossypium hirsutum HOM05D005465 ORTHO05D006612 1.4e-36 157.5 121 67.8
A10p28580 Brassica napus HOM05D005465 ORTHO05D006612 1.9e-36 157.1 122 64.8
BolC9t59633H Brassica oleracea HOM05D005465 ORTHO05D006612 1.9e-36 157.1 122 64.8
Aa31LG3G18480 Aethionema arabicum HOM05D005465 ORTHO05D006612 2.4e-36 156.8 126 62.7
BcaB08g37294 Brassica carinata HOM05D005465 ORTHO05D006612 2.4e-36 156.8 122 64.8
C09p68870 Brassica napus HOM05D005465 ORTHO05D006612 2.4e-36 156.8 122 64.8
Zm00001eb370380 Zea mays HOM05D005465 ORTHO05D006612 4.1e-36 156.0 125 62.4
BraA10t44907Z Brassica rapa HOM05D005465 ORTHO05D006612 5.4e-36 155.6 122 63.9
Carub.0006s0695 Capsella rubella HOM05D005465 ORTHO05D006612 5.4e-36 155.6 122 63.9
Zm00001eb152340 Zea mays HOM05D005465 ORTHO05D006612 5.4e-36 155.6 123 63.4
CARHR205120 Cardamine hirsuta HOM05D005465 ORTHO05D006612 7.1e-36 155.2 123 63.4
Thhalv10015010m.g Eutrema salsugineum HOM05D005465 ORTHO05D006612 1.6e-35 154.1 123 64.2
Sp6g34890 Schrenkiella parvula HOM05D005465 ORTHO05D006612 1.6e-35 154.1 123 64.2
AL6G18430 Arabidopsis lyrata HOM05D005465 ORTHO05D006612 2.7e-35 153.3 123 61.8
Rhsim10G0050100 Rhododendron simsii HOM05D005465 ORTHO05D006612 4.6e-35 152.5 122 61.5
AT5G08060 Arabidopsis thaliana HOM05D005465 ORTHO05D006612 7.8e-35 151.8 123 61.8
A03p03570 Brassica napus HOM05D005465 ORTHO05D006612 1.0e-34 151.4 122 63.1
BraA03t09707Z Brassica rapa HOM05D005465 ORTHO05D006612 1.0e-34 151.4 122 63.1
Os01g0763300 Oryza sativa ssp. japonica HOM05D005465 ORTHO05D006612 1.0e-34 151.4 124 59.7
SHI17457 Sapria himalayana HOM05D005465 ORTHO05D006612 3.9e-34 149.4 122 61.5
BraA02t04941Z Brassica rapa HOM05D005465 ORTHO05D006612 5.1e-34 149.1 121 62.8
Sopen02g016050 Solanum pennellii HOM05D005465 ORTHO05D006612 5.1e-34 149.1 122 64.8
BolC3t12939H Brassica oleracea HOM05D005465 ORTHO05D006612 1.9e-33 147.1 123 63.4
Rhsim10G0048300 Rhododendron simsii HOM05D005465 ORTHO05D006612 1.1e-31 141.4 122 58.2
Sopen10g022010 Solanum pennellii HOM05D005465 ORTHO05D006612 8.9e-31 138.3 122 62.3
Sopen10g012570 Solanum pennellii HOM05D005465 ORTHO05D006612 3.2e-28 129.8 110 61.8
Hma1.2p1_0029F.1_g018040 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 4.2e-28 129.4 80 76.2
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 1.6e-27 127.5 97 64.9
BcaB05g21584 Brassica carinata HOM05D005465 ORTHO05D006612 2.1e-27 127.1 124 54.0
Sopen10g006060 Solanum pennellii HOM05D005465 ORTHO05D006612 5.1e-26 122.5 110 60.0
EL10Ac5g11896 Beta vulgaris HOM05D005465 ORTHO05D006612 2.5e-25 120.2 92 65.2
Gohir.A09G243500 Gossypium hirsutum HOM05D005465 ORTHO05D006612 8.1e-24 115.2 77 70.1
BcaB08g37291 Brassica carinata HOM05D005465 ORTHO05D006612 1.4e-23 114.4 81 66.7
Actinidia17587 Actinidia chinensis HOM05D005465 ORTHO05D006612 1.1e-20 104.8 67 74.6
SEGI_31914 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 9.6e-17 91.7 102 50.0
FAN08G0639 Fragaria x ananassa HOM05D005465 ORTHO05D006612 3.6e-16 89.7 66 62.1
Peaxi162Scf00991g00114 Petunia axillaris HOM05D005465 ORTHO05D006612 3.6e-16 89.7 122 47.5
TAR622G1303 Trochodendron aralioides HOM05D005465 ORTHO05D006612 6.9e-15 85.5 76 57.9
BcaB01g05638 Brassica carinata HOM05D005465 ORTHO05D006612 2.0e-14 84.0 69 62.3
EL10Ac5g12104 Beta vulgaris HOM05D005465 ORTHO05D006612 7.6e-14 82.0 70 57.1
SEGI_27681 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 2.9e-13 80.1 112 42.0
Mapoly0019s0055 Marchantia polymorpha HOM05D005465 ORTHO05D006612 4.9e-13 79.3 76 47.4
Cre12.g484700 Chlamydomonas reinhardtii HOM05D005465 ORTHO05D006612 8.4e-13 78.6 114 43.0
SMO263G0026 Selaginella moellendorffii HOM05D005465 ORTHO05D006612 3.2e-12 76.6 76 44.7
CBR_g37656 Chara braunii HOM05D005465 ORTHO05D006612 2.1e-11 73.9 108 38.9
Lsat_1_v5_gn_4_50580 Lactuca sativa HOM05D005465 ORTHO05D006612 1.8e-10 70.9 49 73.5
AagrBONN_evm.TU.Sc2ySwM_362.2833 Anthoceros agrestis HOM05D005465 ORTHO05D006612 5.1e-10 69.3 75 45.3
SGA_v2.0_scaffold187G40263 Striga asiatica HOM05D005465 ORTHO05D006612 1.3e-08 64.7 95 42.1
MCO16G501 Micromonas commoda HOM05D005465 ORTHO05D006612 1.6e-08 64.3 79 39.2
Pp3c16_5680 Physcomitrium patens HOM05D005465 ORTHO05D006612 2.1e-08 63.9 82 40.2
PRCOL_00003291 Prasinoderma coloniale HOM05D005465 ORTHO05D006612 7.6e-06 55.5 68 47.1


User provided reference genes

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