Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008331g0010 Nicotiana tabacum HOM05D004628 ORTHO05D005166 8.2e-147 523.9 293 100.0
Nitab4.5_0000575g0060 Nicotiana tabacum HOM05D004628 ORTHO05D005166 1.8e-106 389.8 294 75.5
PGSC0003DMG400001291 Solanum tuberosum HOM05D004628 ORTHO05D005166 2.5e-55 219.9 288 59.4
Sopen01g049070 Solanum pennellii HOM05D004628 ORTHO05D005166 1.7e-48 197.2 266 57.1
Solyc01g106750.2 Solanum lycopersicum HOM05D004628 ORTHO05D005166 1.5e-47 194.1 279 53.0
Peaxi162Scf00016g03244 Petunia axillaris HOM05D004628 ORTHO05D005166 4.3e-47 192.6 282 58.2
Nitab4.5_0010657g0040 Nicotiana tabacum HOM05D004628 ORTHO05D005166 1.6e-46 190.7 273 56.0
Nitab4.5_0000772g0030 Nicotiana tabacum HOM05D004628 ORTHO05D005166 1.1e-42 177.9 208 61.5
CAN.G411.101 Capsicum annuum HOM05D002370 ORTHO05D005166 3.3e-23 113.2 202 51.0
TAR381G0961 Trochodendron aralioides HOM05D004628 ORTHO05D005166 5.7e-23 112.5 176 44.9
Hma1.2p1_1051F.1_g252220 Hydrangea macrophylla HOM05D004628 ORTHO05D005166 9.7e-23 111.7 166 48.2
Thecc.02G121000 Theobroma cacao HOM05D004628 ORTHO05D005166 2.8e-22 110.2 292 35.6
Cc02_g20190 Coffea canephora HOM05D004628 ORTHO05D005166 2.4e-21 107.1 281 34.5
CAN.G1627.6 Capsicum annuum HOM05D004628 ORTHO05D005166 3.1e-21 106.7 80 76.2
Dinv16065 Davidia involucrata HOM05D004628 ORTHO05D005166 1.0e-19 101.7 159 49.1
Dinv09529 Davidia involucrata HOM05D004628 ORTHO05D005166 2.2e-19 100.5 151 49.0
Gohir.D02G203066 Gossypium hirsutum HOM05D004628 ORTHO05D005166 1.4e-18 97.8 169 45.6
Gorai.005G229300 Gossypium raimondii HOM05D004628 ORTHO05D005166 1.4e-18 97.8 169 45.6
Duzib132G0942 Durio zibethinus HOM05D004628 ORTHO05D005166 1.9e-18 97.4 294 33.3
Rhsim05G0093300 Rhododendron simsii HOM05D004628 ORTHO05D005166 2.5e-18 97.1 206 40.3
QL11p028919 Quercus lobata HOM05D004628 ORTHO05D005166 3.2e-18 96.7 110 53.6
QL93p0138_0014 Quercus lobata HOM05D004628 ORTHO05D005166 3.2e-18 96.7 110 53.6
CSS0024832 Camellia sinensis var. sinensis HOM05D004628 ORTHO05D005166 4.2e-18 96.3 131 47.3
DCAR_021936 Daucus carota HOM05D004628 ORTHO05D005166 5.5e-18 95.9 167 43.7
CAN.G1164.3 Capsicum annuum HOM05D009846 ORTHO05D002235 9.4e-18 95.1 139 51.1
Atru.chr5.2254 Acer truncatum HOM05D004628 ORTHO05D005166 1.2e-17 94.7 202 39.1
MSTRG.16666 Avicennia marina HOM05D004628 ORTHO05D005166 7.9e-17 92.0 244 36.5
Duzib132G1149 Durio zibethinus HOM05D004628 ORTHO05D005166 1.4e-16 91.3 294 32.7
Atru.chr1.1899 Acer truncatum HOM05D004628 ORTHO05D005166 1.8e-16 90.9 173 41.0
Actinidia28002 Actinidia chinensis HOM05D004628 ORTHO05D006160 1.8e-16 90.9 157 44.6
Gohir.A03G180400 Gossypium hirsutum HOM05D004628 ORTHO05D005166 1.8e-16 90.9 133 47.4
Lj5A222T77 Lonicera japonica HOM05D004628 ORTHO05D005166 2.3e-16 90.5 315 33.0
Lj4g0013789 Lotus japonicus HOM05D004628 ORTHO05D005166 3.0e-16 90.1 125 48.0
CiPaw.06G163200 Carya illinoinensis HOM05D004628 ORTHO05D005166 6.7e-16 89.0 131 45.0
Glyma.07G260600 Glycine max HOM05D004628 ORTHO05D005166 2.5e-15 87.0 203 38.9
TAR628G0237 Trochodendron aralioides HOM05D004628 ORTHO05D005166 4.3e-15 86.3 184 37.0
RcHm_v2.0_Chr6g0247921 Rosa chinensis HOM05D004628 ORTHO05D005166 5.7e-15 85.9 224 36.2
Lalb_Chr18g0056371 Lupinus albus HOM05D004628 ORTHO05D005166 1.3e-14 84.7 109 51.4
Ca_21082_v3 Cicer arietinum L. HOM05D004628 ORTHO05D005166 2.2e-14 84.0 121 48.8
Medtr4g132160 Medicago truncatula HOM05D004628 ORTHO05D005166 2.2e-14 84.0 117 49.6
Ciclev10027822m.g Citrus clementina HOM05D004628 ORTHO05D005166 4.8e-14 82.8 178 39.3
GSVIVG01037038001 Vitis vinifera HOM05D004628 ORTHO05D005166 6.3e-14 82.4 82 57.3
Nn6g32057 Nelumbo nucifera HOM05D004628 ORTHO05D005166 8.2e-14 82.0 176 43.2
Glyma.17G013400 Glycine max HOM05D004628 ORTHO05D005166 1.8e-13 80.9 202 36.6
TWI14G1143 Tripterygium wilfordii HOM05D004628 ORTHO05D005166 1.8e-13 80.9 113 48.7
Potri.009G084400 Populus trichocarpa HOM05D004628 ORTHO05D005166 2.4e-13 80.5 206 36.4
COL.COLO4_32472 Corchorus olitorius HOM05D004628 ORTHO05D005166 3.1e-13 80.1 65 67.7
SGA_v2.0_scaffold519G52683 Striga asiatica HOM05D004628 ORTHO05D005166 4.1e-13 79.7 161 39.1
AUR62027031 Chenopodium quinoa HOM05D004628 ORTHO05D005166 5.3e-13 79.3 110 51.8
AUR62030875 Chenopodium quinoa HOM05D004628 ORTHO05D005166 5.3e-13 79.3 168 41.7
Migut.B00478 Erythranthe guttata HOM05D004628 ORTHO05D005166 5.3e-13 79.3 211 35.1
arahy.Tifrunner.gnm1.ann1.L5X8FN Arachis hypogaea HOM05D004628 ORTHO05D005166 6.9e-13 79.0 118 48.3
Aqoxy6G01519 Aquilegia oxysepala HOM05D004628 ORTHO05D005166 9.1e-13 78.6 167 40.7
TPR.G37037 Trifolium pratense HOM05D004628 ORTHO05D005166 9.1e-13 78.6 116 49.1
vmacro22260 Vaccinium macrocarpon HOM05D004628 ORTHO05D005166 1.2e-12 78.2 140 42.1
Cfa004712 Carpinus fangiana HOM05D004628 ORTHO05D005166 1.5e-12 77.8 254 35.8
arahy.Tifrunner.gnm1.ann1.V3P7C9 Arachis hypogaea HOM05D000513 ORTHO05D005786 4.5e-12 76.3 109 44.0
Eucgr.B01419 Eucalyptus grandis HOM05D004628 ORTHO05D005166 5.9e-12 75.9 303 30.4
arahy.Tifrunner.gnm1.ann1.EFUN8Y Arachis hypogaea HOM05D004628 ORTHO05D005166 7.7e-12 75.5 109 44.0
FvH4_2g03070 Fragaria vesca HOM05D004628 ORTHO05D005166 2.2e-11 73.9 96 53.1
Oeu037295.1 Olea europaea HOM05D004628 ORTHO05D005166 2.2e-11 73.9 109 47.7
Prupe.8G151700 Prunus persica HOM05D004628 ORTHO05D005166 2.9e-11 73.6 223 34.1
FAN24G0611 Fragaria x ananassa HOM05D004628 ORTHO05D005166 5.0e-11 72.8 96 53.1
arahy.Tifrunner.gnm1.ann1.R9786Y Arachis hypogaea HOM05D004628 ORTHO05D005166 6.5e-11 72.4 119 46.2
PGR142G3374 Punica granatum HOM05D004628 ORTHO05D005166 6.5e-11 72.4 174 36.2
FAN27G1701 Fragaria x ananassa HOM05D004628 ORTHO05D005166 1.1e-10 71.6 96 53.1
THA.LOC104819526 Tarenaya hassleriana HOM05D004628 ORTHO05D005166 1.4e-10 71.2 120 43.3
CsaV3_4G000030 Cucumis sativus L. HOM05D004628 ORTHO05D005166 1.9e-10 70.9 153 36.6
CAN.G1627.4 Capsicum annuum HOM05D004628 ORTHO05D005166 4.2e-10 69.7 43 79.1
Potri.001G289100 Populus trichocarpa HOM05D004628 ORTHO05D005166 5.5e-10 69.3 103 48.5
ClCG10G009980 Citrullus lanatus HOM05D004628 ORTHO05D005166 7.2e-10 68.9 61 62.3
FAN20G2820 Fragaria x ananassa HOM05D004628 ORTHO05D005166 7.2e-10 68.9 97 51.5
Haze_10333 Corylus avellana HOM05D004628 ORTHO05D005166 9.4e-10 68.6 256 32.8
Cpa.g.sc106.25 Carica papaya HOM05D004628 ORTHO05D005166 1.2e-09 68.2 199 35.7
Sabra09G0065100 Salix brachista HOM05D004628 ORTHO05D005166 1.2e-09 68.2 236 31.8
PSO210G3573 Papaver somniferum HOM05D004628 ORTHO05D005166 1.6e-09 67.8 205 31.2
CARHR106490 Cardamine hirsuta HOM05D004628 ORTHO05D005166 3.6e-09 66.6 186 35.5
Phvul.003G078900 Phaseolus vulgaris HOM05D004628 ORTHO05D005166 3.6e-09 66.6 115 44.3
Hund00415 Selenicereus undatus HOM05D004628 ORTHO05D005166 3.6e-09 66.6 237 30.4
BraA07t28247Z Brassica rapa HOM05D004628 ORTHO05D005166 4.7e-09 66.2 174 35.6
SalBow6G1764 Salvia bowleyana HOM05D004628 ORTHO05D005166 4.7e-09 66.2 277 30.3
SalBow6G5308 Salvia bowleyana HOM05D004628 ORTHO05D005166 4.7e-09 66.2 277 30.3
Sed0020853 Sechium edule HOM05D004628 ORTHO05D005166 6.1e-09 65.9 88 50.0
Ah.01g024550 Amaranthus hybridus HOM05D004628 ORTHO05D005166 1.0e-08 65.1 297 28.3
Manes.10G088200 Manihot esculenta HOM05D004628 ORTHO05D005166 1.4e-08 64.7 232 32.3
PSO447G0365 Papaver somniferum HOM05D004628 ORTHO05D005166 1.4e-08 64.7 205 30.2
A07p04590 Brassica napus HOM05D004628 ORTHO05D005166 1.8e-08 64.3 168 33.9
ECA234G3304 Erigeron canadensis HOM05D004628 ORTHO05D005166 2.3e-08 63.9 66 53.0
Gohir.A13G048100 Gossypium hirsutum HOM05D004628 ORTHO05D005166 5.1e-08 62.8 73 49.3
SGA_v2.0_scaffold32G12978 Striga asiatica HOM05D004628 ORTHO05D005166 5.1e-08 62.8 213 31.0
BcaC06g36138 Brassica carinata HOM05D004628 ORTHO05D005166 6.7e-08 62.4 160 38.8
C07p07410 Brassica napus HOM05D004628 ORTHO05D005166 6.7e-08 62.4 124 41.1
BolC7t41157H Brassica oleracea HOM05D004628 ORTHO05D005166 6.7e-08 62.4 160 38.8
Gohir.D13G046500 Gossypium hirsutum HOM05D004628 ORTHO05D005166 6.7e-08 62.4 69 49.3
MELO3C018028.2 Cucumis melo HOM05D004628 ORTHO05D005166 8.8e-08 62.0 100 43.0
Sc08g0004290 Simmondsia chinensis HOM05D004628 ORTHO05D005166 8.8e-08 62.0 133 41.4
Psat4g006640 Pisum sativum HOM05D004628 ORTHO05D005166 1.1e-07 61.6 119 44.5
CAN.G606.82 Capsicum annuum HOM05D004628 ORTHO05D005166 1.5e-07 61.2 113 47.8
Gorai.013G052200 Gossypium raimondii HOM05D004628 ORTHO05D005166 2.0e-07 60.8 77 50.6
Sp3g29460 Schrenkiella parvula HOM05D004628 ORTHO05D005166 2.6e-07 60.5 167 37.1
AT2G16270 Arabidopsis thaliana HOM05D004628 ORTHO05D005166 9.7e-07 58.5 127 40.2
VMungo1215G2063 Vigna mungo HOM05D004628 ORTHO05D005166 9.7e-07 58.5 244 32.0
AL3G52350 Arabidopsis lyrata HOM05D004628 ORTHO05D005166 1.3e-06 58.2 51 62.7
Sopen07g020760 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-06 58.2 88 52.3
Aa31LG8G13660 Aethionema arabicum HOM05D004628 ORTHO05D005166 2.2e-06 57.4 57 59.6
EL10Ac4g09112 Beta vulgaris HOM05D004628 ORTHO05D005166 2.2e-06 57.4 182 32.4
Sabra16G0180900 Salix brachista HOM05D004628 ORTHO05D005166 2.2e-06 57.4 188 32.4
unitig_60.g25465 Utricularia gibba HOM05D004628 ORTHO05D005166 2.8e-06 57.0 143 32.2
Thhalv10022556m.g Eutrema salsugineum HOM05D004628 ORTHO05D005166 3.7e-06 56.6 176 35.2
Lsat_1_v5_gn_5_111860 Lactuca sativa HOM05D004628 ORTHO05D005166 3.7e-06 56.6 75 49.3
Carub.0003s2996 Capsella rubella HOM05D004628 ORTHO05D005166 6.3e-06 55.8 228 31.1
Thhalv10006806m.g Eutrema salsugineum HOM05D004628 ORTHO05D005166 8.2e-06 55.5 124 39.5


User provided reference genes

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