Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008314g0010 Nicotiana tabacum HOM05D006672 ORTHO05D007769 1.5e-82 309.7 178 100.0
Nitab4.5_0001315g0240 Nicotiana tabacum HOM05D006672 ORTHO05D007769 1.9e-74 282.7 179 84.9
Sopen03g039560 Solanum pennellii HOM05D006672 ORTHO05D007769 3.6e-57 225.3 177 70.6
Solyc03g120740.1 Solanum lycopersicum HOM05D006672 ORTHO05D007769 1.7e-54 216.5 177 69.5
PGSC0003DMG400040414 Solanum tuberosum HOM05D006672 ORTHO05D007769 2.4e-48 196.1 179 65.9
Cc04_g03140 Coffea canephora HOM05D006672 ORTHO05D007769 4.3e-42 175.3 147 61.9
Oeu040367.1 Olea europaea HOM05D006672 ORTHO05D007769 9.0e-40 167.5 177 56.5
Migut.D01021 Erythranthe guttata HOM05D006672 ORTHO05D007769 3.2e-37 159.1 147 61.2
MSTRG.22671 Avicennia marina HOM05D006672 ORTHO05D007769 2.2e-33 146.4 178 50.6
SGA_v2.0_scaffold4G02004 Striga asiatica HOM05D006672 ORTHO05D007769 8.2e-33 144.4 177 54.2
Dinv30493 Davidia involucrata HOM05D006672 ORTHO05D007769 1.4e-32 143.7 154 58.4
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 5.9e-31 138.3 181 55.2
unitig_899.g14774 Utricularia gibba HOM05D006672 ORTHO05D007769 1.0e-30 137.5 170 48.2
Rhsim12G0199700 Rhododendron simsii HOM05D006672 ORTHO05D007769 2.9e-30 136.0 149 53.7
SalBow1G8254 Salvia bowleyana HOM05D000380 ORTHO05D000561 8.5e-30 134.4 149 55.7
Cfa009362 Carpinus fangiana HOM05D006672 ORTHO05D007769 1.9e-29 133.3 185 53.5
QL05p022164 Quercus lobata HOM05D006672 ORTHO05D007769 5.5e-29 131.7 187 47.1
ECA234G2073 Erigeron canadensis HOM05D006672 ORTHO05D007769 1.6e-28 130.2 152 56.6
HanXRQChr10g0313401 Helianthus annuus HOM05D006672 ORTHO05D007769 2.7e-28 129.4 151 56.3
Peaxi162Scf00015g00013 Petunia axillaris HOM05D006672 ORTHO05D007769 2.7e-28 129.4 95 73.7
Nitab4.5_0002600g0060 Nicotiana tabacum HOM05D006672 ORTHO05D007769 6.1e-28 128.3 101 71.3
Haze_12408 Corylus avellana HOM05D006672 ORTHO05D007769 1.0e-27 127.5 153 55.6
TAR636G2852 Trochodendron aralioides HOM05D006672 ORTHO05D007769 3.0e-27 125.9 185 48.1
Actinidia08988 Actinidia chinensis HOM05D000726 ORTHO05D007769 1.1e-26 124.0 149 52.3
CiPaw.02G149600 Carya illinoinensis HOM05D006672 ORTHO05D007769 7.4e-26 121.3 159 51.6
Glyma.08G205200 Glycine max HOM05D006672 ORTHO05D007769 9.7e-26 120.9 181 48.6
FvH4_6g31600 Fragaria vesca HOM05D006672 ORTHO05D007769 1.7e-25 120.2 148 50.7
Lsat_1_v5_gn_5_130661 Lactuca sativa HOM05D006672 ORTHO05D007769 3.7e-25 119.0 147 54.4
EL10Ac9g22019 Beta vulgaris HOM05D000202 ORTHO05D000117 8.2e-25 117.9 178 48.3
FAN09G1670 Fragaria x ananassa HOM05D006672 ORTHO05D007769 8.2e-25 117.9 148 50.7
DCAR_022631 Daucus carota HOM05D006672 ORTHO05D007769 1.4e-24 117.1 148 52.7
Lsat_1_v5_gn_2_34400 Lactuca sativa HOM05D008424 ORTHO05D007769 1.4e-24 117.1 150 54.7
Potri.003G053500 Populus trichocarpa HOM05D006672 ORTHO05D007769 2.4e-24 116.3 191 41.9
DCAR_026329 Daucus carota HOM05D006672 ORTHO05D007769 4.1e-24 115.5 177 47.5
FAN14G5379 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.5e-23 113.6 148 49.3
Hma1.2p1_2022F.1_g311340 Hydrangea macrophylla HOM05D006672 ORTHO05D007769 2.0e-23 113.2 172 48.8
arahy.Tifrunner.gnm1.ann1.HW7XL7 Arachis hypogaea HOM05D006672 ORTHO05D007769 5.9e-23 111.7 130 54.6
Atru.chr1.3318 Acer truncatum HOM05D006672 ORTHO05D007769 2.2e-22 109.8 181 47.0
Manes.04G128475 Manihot esculenta HOM05D006672 ORTHO05D007769 2.9e-22 109.4 192 43.2
vmacro16964 Vaccinium macrocarpon HOM05D006672 ORTHO05D007769 2.9e-22 109.4 160 42.5
TWI12G1441 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 3.8e-22 109.0 193 40.4
Phvul.010G149100 Phaseolus vulgaris HOM05D006672 ORTHO05D007769 5.0e-22 108.6 183 43.2
Gohir.D05G130600 Gossypium hirsutum HOM05D006672 ORTHO05D007769 6.5e-22 108.2 199 49.2
COL.COLO4_30405 Corchorus olitorius HOM05D006672 ORTHO05D007769 1.1e-21 107.5 194 41.8
Gorai.009G134300 Gossypium raimondii HOM05D006672 ORTHO05D007769 1.1e-21 107.5 199 48.7
Lsat_1_v5_gn_5_130760 Lactuca sativa HOM05D006672 ORTHO05D007769 2.5e-21 106.3 130 53.8
TWI75G0771 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 5.5e-21 105.1 191 39.8
FAN05G5736 Fragaria x ananassa HOM05D006672 ORTHO05D007769 9.4e-21 104.4 153 47.7
Lalb_Chr25g0279941 Lupinus albus HOM05D006672 ORTHO05D007769 1.2e-20 104.0 178 48.9
Nn8g39154 Nelumbo nucifera HOM05D006672 ORTHO05D007769 1.6e-20 103.6 161 46.6
Sabra03G0029900 Salix brachista HOM05D006672 ORTHO05D007769 1.6e-20 103.6 132 53.0
Prupe.3G068600 Prunus persica HOM05D006672 ORTHO05D007769 2.1e-20 103.2 183 44.3
Ah.01g021520 Amaranthus hybridus HOM05D006672 ORTHO05D007769 3.6e-20 102.4 183 44.8
arahy.Tifrunner.gnm1.ann1.N61AC9 Arachis hypogaea HOM05D006672 ORTHO05D007769 3.6e-20 102.4 122 50.8
Ciclev10026595m.g Citrus clementina HOM05D006672 ORTHO05D007769 4.7e-20 102.1 187 40.1
arahy.Tifrunner.gnm1.ann1.MVJ1PZ Arachis hypogaea HOM05D006672 ORTHO05D007769 7.9e-20 101.3 176 44.3
arahy.Tifrunner.gnm1.ann1.ZTP7X5 Arachis hypogaea HOM05D006672 ORTHO05D007769 7.9e-20 101.3 127 49.6
Aqoxy7G01641 Aquilegia oxysepala HOM05D006672 ORTHO05D007769 1.4e-19 100.5 151 43.7
VMungo0331G0342 Vigna mungo HOM05D006672 ORTHO05D007769 1.4e-19 100.5 186 43.5
AL1G27320 Arabidopsis lyrata HOM05D006672 ORTHO05D007769 1.8e-19 100.1 178 43.8
RcHm_v2.0_Chr2g0138661 Rosa chinensis HOM05D006672 ORTHO05D007769 1.8e-19 100.1 152 47.4
Sp1g13550 Schrenkiella parvula HOM05D006672 ORTHO05D007769 1.8e-19 100.1 188 40.4
Carub.0001s1499 Capsella rubella HOM05D006672 ORTHO05D007769 2.3e-19 99.8 176 46.0
MBI04_g22016_MAGBIO Magnolia biondii HOM05D006672 ORTHO05D007769 2.3e-19 99.8 149 47.0
arahy.Tifrunner.gnm1.ann1.QF27IC Arachis hypogaea HOM05D006672 ORTHO05D007769 3.0e-19 99.4 130 51.5
Gohir.A05G131200 Gossypium hirsutum HOM05D006672 ORTHO05D007769 3.0e-19 99.4 199 45.7
AUR62011637 Chenopodium quinoa HOM05D006672 ORTHO05D007769 3.9e-19 99.0 140 49.3
CARHR015760 Cardamine hirsuta HOM05D006672 ORTHO05D007769 6.7e-19 98.2 185 44.9
arahy.Tifrunner.gnm1.ann1.C7681Z Arachis hypogaea HOM05D006672 ORTHO05D007769 8.8e-19 97.8 130 51.5
arahy.Tifrunner.gnm1.ann1.07RGV5 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.1e-18 97.4 182 42.9
THA.LOC104800426 Tarenaya hassleriana HOM05D006672 ORTHO05D007769 2.0e-18 96.7 178 41.6
Thhalv10008936m.g Eutrema salsugineum HOM05D006672 ORTHO05D007769 4.4e-18 95.5 186 44.1
A06p11230 Brassica napus HOM05D006672 ORTHO05D007769 7.4e-18 94.7 181 42.5
BolC5t30073H Brassica oleracea HOM05D006672 ORTHO05D007769 7.4e-18 94.7 186 43.0
PSO782G0352 Papaver somniferum HOM05D006672 ORTHO05D007769 7.4e-18 94.7 149 45.0
BraA06t24303Z Brassica rapa HOM05D006672 ORTHO05D007769 9.7e-18 94.4 183 39.3
AUR62016468 Chenopodium quinoa HOM05D006672 ORTHO05D007769 9.7e-18 94.4 129 49.6
Thecc.06G091100 Theobroma cacao HOM05D006672 ORTHO05D007769 9.7e-18 94.4 198 39.4
CANSAT56G0062 Cannabis sativa HOM05D006672 ORTHO05D007769 1.3e-17 94.0 184 40.8
AT1G15230 Arabidopsis thaliana HOM05D006672 ORTHO05D007769 2.8e-17 92.8 178 39.9
PSO832G0654 Papaver somniferum HOM05D006672 ORTHO05D007769 3.7e-17 92.4 151 43.7
BcaC05g25452 Brassica carinata HOM05D006672 ORTHO05D007769 4.8e-17 92.0 186 41.4
C05p13360 Brassica napus HOM05D006672 ORTHO05D007769 4.8e-17 92.0 186 41.4
arahy.Tifrunner.gnm1.ann1.K72DJ3 Arachis hypogaea HOM05D006672 ORTHO05D007769 8.2e-17 91.3 97 57.7
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 8.2e-17 91.3 150 44.0
Lj3g0012066 Lotus japonicus HOM05D006672 ORTHO05D007769 1.8e-16 90.1 189 39.7
Duzib160G0370 Durio zibethinus HOM05D000726 ORTHO05D007769 3.1e-16 89.4 162 42.0
MD17G1192500 Malus domestica HOM05D006672 ORTHO05D007769 5.3e-16 88.6 146 44.5
arahy.Tifrunner.gnm1.ann1.HQ5KA8 Arachis hypogaea HOM05D006672 ORTHO05D007769 9.1e-16 87.8 98 52.0
BcaC05g25464 Brassica carinata HOM05D006672 ORTHO05D007769 1.2e-15 87.4 184 45.7
MELO3C012968.2 Cucumis melo HOM05D006672 ORTHO05D007769 7.7e-15 84.7 168 39.3
Medtr0206s0010 Medicago truncatula HOM05D006672 ORTHO05D007769 1.3e-14 84.0 91 50.5
Medtr4g012950 Medicago truncatula HOM05D006672 ORTHO05D007769 2.2e-14 83.2 93 51.6
ClCG07G013120 Citrullus lanatus HOM05D006672 ORTHO05D007769 2.9e-14 82.8 168 36.9
CsaV3_3G025030 Cucumis sativus L. HOM05D006672 ORTHO05D007769 3.8e-14 82.4 140 41.4
CSS0000508 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 5.0e-14 82.0 111 51.4
arahy.Tifrunner.gnm1.ann1.XTGM9Z Arachis hypogaea HOM05D006672 ORTHO05D007769 6.5e-14 81.6 126 43.7
Sed0005168 Sechium edule HOM05D006672 ORTHO05D007769 2.5e-13 79.7 112 47.3
Duzib235G0275 Durio zibethinus HOM05D006672 ORTHO05D007769 3.2e-13 79.3 112 48.2
TPR.G17666 Trifolium pratense HOM05D006672 ORTHO05D007769 4.2e-13 79.0 91 49.5
BcaC05g25462 Brassica carinata HOM05D006672 ORTHO05D007769 5.5e-13 78.6 177 39.5
SMO364G0119 Selaginella moellendorffii HOM05D006672 ORTHO05D007769 1.2e-12 77.4 135 40.0
Lsat_1_v5_gn_5_130640 Lactuca sativa HOM05D006672 ORTHO05D007769 1.6e-12 77.0 65 67.7
Sc15g0001280 Simmondsia chinensis HOM05D006672 ORTHO05D007769 1.6e-12 77.0 181 39.2
Ca_20375_v3 Cicer arietinum L. HOM05D006672 ORTHO05D007769 2.7e-12 76.3 94 48.9
Psat7g250280 Pisum sativum HOM05D006672 ORTHO05D007769 2.7e-12 76.3 93 48.4
ATR0829G196 Amborella trichopoda HOM05D006672 ORTHO05D007769 1.0e-11 74.3 144 40.3
SGA_v2.0_scaffold5G02564 Striga asiatica HOM05D000085 ORTHO05D000274 3.0e-11 72.8 143 39.9
Aa31LG7G40 Aethionema arabicum HOM05D006672 ORTHO05D007769 6.7e-11 71.6 118 44.9
Mapoly0141s0006 Marchantia polymorpha HOM05D006672 ORTHO05D007769 8.8e-11 71.2 131 41.2
HPP92_005483 Vanilla planifolia HOM05D006672 ORTHO05D007769 1.1e-10 70.9 144 37.5
SEGI_22972 Sequoiadendron giganteum HOM05D006672 ORTHO05D007769 2.0e-10 70.1 133 39.8
AagrBONN_evm.TU.Sc2ySwM_362.2137 Anthoceros agrestis HOM05D006672 ORTHO05D007769 9.7e-10 67.8 125 36.8
arahy.Tifrunner.gnm1.ann1.DAY3RM Arachis hypogaea HOM05D006672 ORTHO05D007769 2.2e-09 66.6 130 42.3
CSS0037944 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 4.8e-09 65.5 126 40.5
Pp3c1_40010 Physcomitrium patens HOM05D006672 ORTHO05D007769 4.8e-09 65.5 134 39.6
Zm00001eb098380 Zea mays HOM05D006672 ORTHO05D007769 8.2e-09 64.7 54 64.8
Rhsim06G0080600 Rhododendron simsii HOM05D006672 ORTHO05D007769 3.1e-08 62.8 66 53.0
PGR102G2442 Punica granatum HOM05D006672 ORTHO05D007769 5.3e-08 62.0 159 35.8
Nitab4.5_0000121g0160 Nicotiana tabacum HOM05D006672 ORTHO05D007769 2.6e-07 59.7 37 81.1
Lsat_1_v5_gn_4_162060 Lactuca sativa HOM05D006672 ORTHO05D007769 3.5e-07 59.3 61 55.7
Os09g0344700 Oryza sativa ssp. japonica HOM05D006672 ORTHO05D007769 4.5e-07 58.9 84 47.6
Sc12g0009390 Simmondsia chinensis HOM05D006672 ORTHO05D007769 5.9e-07 58.5 79 50.6
PGR102G0682 Punica granatum HOM05D006672 ORTHO05D007769 7.7e-07 58.2 46 69.6
Nitab4.5_0000759g0250 Nicotiana tabacum HOM05D006672 ORTHO05D007769 1.7e-06 57.0 63 61.9


User provided reference genes

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