Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008299g0020 Nicotiana tabacum HOM05D005019 ORTHO05D006625 3.5e-300 1034.2 554 100.0
Nitab4.5_0003006g0020 Nicotiana tabacum HOM05D005019 ORTHO05D006625 5.8e-287 990.3 554 95.3
Nitab4.5_0010414g0010 Nicotiana tabacum HOM05D005019 ORTHO05D006625 1.7e-286 988.8 554 95.7
Nitab4.5_0001370g0040 Nicotiana tabacum HOM05D005019 ORTHO05D006625 7.1e-277 956.8 501 95.6
PGSC0003DMG400023686 Solanum tuberosum HOM05D005019 ORTHO05D006625 1.5e-271 939.1 557 88.0
Peaxi162Scf00045g00177 Petunia axillaris HOM05D005019 ORTHO05D006625 8.4e-270 933.3 564 87.4
Sopen10g030790 Solanum pennellii HOM05D005019 ORTHO05D006625 1.0e-259 899.8 557 86.5
Solyc10g080180.3 Solanum lycopersicum HOM05D005019 ORTHO05D006625 1.5e-258 896.0 501 88.8
Actinidia21157 Actinidia chinensis HOM05D005019 ORTHO05D006625 1.2e-226 790.0 568 72.5
Dinv34572 Davidia involucrata HOM05D005019 ORTHO05D006625 7.7e-223 777.3 502 77.7
Lj1C59T1 Lonicera japonica HOM05D005019 ORTHO05D006625 8.6e-222 773.9 568 72.9
Dinv22477 Davidia involucrata HOM05D005019 ORTHO05D006625 4.2e-221 771.5 503 77.5
Cc02_g22310 Coffea canephora HOM05D005019 ORTHO05D006625 9.5e-221 770.4 571 70.4
Lj1P543T22 Lonicera japonica HOM05D005019 ORTHO05D006625 4.7e-220 768.1 500 77.2
GSVIVG01000726001 Vitis vinifera HOM05D005019 ORTHO05D006625 2.0e-218 762.7 503 75.7
Cfa002330 Carpinus fangiana HOM05D005019 ORTHO05D006625 4.4e-218 761.5 504 76.2
Rhsim07G0080400 Rhododendron simsii HOM05D005019 ORTHO05D006625 2.4e-216 755.7 569 71.9
Migut.N02183 Erythranthe guttata HOM05D005019 ORTHO05D006625 1.0e-214 750.4 503 73.8
MELO3C020849.2 Cucumis melo HOM05D005019 ORTHO05D006625 5.0e-214 748.0 505 74.1
Prupe.8G231800 Prunus persica HOM05D005019 ORTHO05D006625 1.5e-213 746.5 504 75.0
Prupe.5G054300 Prunus persica HOM05D005019 ORTHO05D006625 1.6e-212 743.0 503 74.2
ClCG02G012250 Citrullus lanatus HOM05D005019 ORTHO05D006625 2.1e-212 742.7 504 73.2
Haze_24536 Corylus avellana HOM05D005019 ORTHO05D006625 2.1e-212 742.7 491 76.0
CiPaw.03G257900 Carya illinoinensis HOM05D005019 ORTHO05D006625 2.8e-212 742.3 504 73.8
CsaV3_2G016400 Cucumis sativus L. HOM05D005019 ORTHO05D006625 1.0e-211 740.3 503 73.6
Ciclev10019516m.g Citrus clementina HOM05D005019 ORTHO05D006625 1.4e-211 740.0 503 73.4
RcHm_v2.0_Chr6g0289431 Rosa chinensis HOM05D005019 ORTHO05D006625 1.4e-211 740.0 504 73.4
CANSAT35G0193 Cannabis sativa HOM05D005019 ORTHO05D006625 4.0e-211 738.4 506 73.5
FvH4_5g20520 Fragaria vesca HOM05D005019 ORTHO05D006625 4.0e-211 738.4 504 74.0
Sc04g0003030 Simmondsia chinensis HOM05D005019 ORTHO05D006625 5.2e-211 738.0 500 73.2
arahy.Tifrunner.gnm1.ann1.TZR8AU Arachis hypogaea HOM05D005019 ORTHO05D006625 1.2e-210 736.9 499 73.9
Manes.16G024300 Manihot esculenta HOM05D005019 ORTHO05D006625 1.3e-209 733.4 503 73.2
Potri.005G218600 Populus trichocarpa HOM05D005019 ORTHO05D006625 1.7e-209 733.0 504 74.4
PGR044G0331 Punica granatum HOM05D005019 ORTHO05D006625 2.9e-209 732.3 508 73.8
FAN27G0650 Fragaria x ananassa HOM05D005019 ORTHO05D006625 8.3e-209 730.7 504 72.6
FAN18G2643 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.1e-208 730.3 504 73.4
MD05G1205400 Malus domestica HOM05D005019 ORTHO05D006625 1.1e-208 730.3 504 73.8
MSTRG.12540 Avicennia marina HOM05D005019 ORTHO05D006625 1.4e-208 729.9 570 65.8
FvH4_2g22480 Fragaria vesca HOM05D005019 ORTHO05D006625 1.9e-208 729.6 504 72.6
FAN20G1740 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.9e-208 729.6 504 72.6
Sed0015889 Sechium edule HOM05D005019 ORTHO05D006625 1.9e-208 729.6 505 72.7
MD10G1192400 Malus domestica HOM05D005019 ORTHO05D006625 3.2e-208 728.8 505 73.9
FAN24G1214 Fragaria x ananassa HOM05D005019 ORTHO05D006625 4.1e-208 728.4 504 72.4
Ca_00175_v3 Cicer arietinum L. HOM05D005019 ORTHO05D006625 7.0e-208 727.6 505 72.5
Glyma.15G059400 Glycine max HOM05D005019 ORTHO05D006625 1.6e-207 726.5 558 67.2
Glyma.13G255400 Glycine max HOM05D005019 ORTHO05D006625 2.7e-207 725.7 556 68.0
FAN04G2884 Fragaria x ananassa HOM05D005019 ORTHO05D006625 3.5e-207 725.3 504 72.8
Eucgr.K03309 Eucalyptus grandis HOM05D005019 ORTHO05D006625 6.0e-207 724.5 504 71.8
Duzib147G1145 Durio zibethinus HOM05D005019 ORTHO05D006625 7.8e-207 724.2 503 73.6
Thecc.01G159500 Theobroma cacao HOM05D005019 ORTHO05D006625 1.0e-206 723.8 504 72.6
Gohir.D11G348100 Gossypium hirsutum HOM05D005019 ORTHO05D006625 1.7e-206 723.0 504 72.8
TWI31G0602 Tripterygium wilfordii HOM05D005019 ORTHO05D006625 1.7e-206 723.0 504 72.4
TAR633G0331 Trochodendron aralioides HOM05D005019 ORTHO05D006625 3.9e-206 721.8 496 73.4
Gorai.007G378500 Gossypium raimondii HOM05D005019 ORTHO05D006625 1.1e-205 720.3 504 72.8
FAN15G0975 Fragaria x ananassa HOM05D005019 ORTHO05D006625 5.6e-205 718.0 504 72.2
Psat1g046760 Pisum sativum HOM05D005019 ORTHO05D006625 5.6e-205 718.0 505 72.1
Atru.chr5.1578 Acer truncatum HOM05D005019 ORTHO05D006625 9.5e-205 717.2 502 72.5
Gohir.A11G329100 Gossypium hirsutum HOM05D005019 ORTHO05D006625 1.2e-204 716.8 504 72.8
VMungo0540G2473 Vigna mungo HOM05D005019 ORTHO05D006625 1.6e-204 716.5 507 71.2
Lalb_Chr19g0134621 Lupinus albus HOM05D005019 ORTHO05D006625 3.6e-204 715.3 555 66.3
SalBow6G4122 Salvia bowleyana HOM05D005019 ORTHO05D006625 3.6e-204 715.3 505 72.1
ECA247G2036 Erigeron canadensis HOM05D005019 ORTHO05D006625 5.2e-203 711.4 567 67.9
Gohir.D04G014300 Gossypium hirsutum HOM05D005019 ORTHO05D006625 5.2e-203 711.4 505 71.5
Gorai.012G016900 Gossypium raimondii HOM05D005019 ORTHO05D006625 6.8e-203 711.1 505 71.7
SalBow3G3235 Salvia bowleyana HOM05D005019 ORTHO05D006625 6.8e-203 711.1 506 71.1
Cpa.g.sc200.5 Carica papaya HOM05D005019 ORTHO05D006625 8.9e-203 710.7 501 71.7
Lalb_Chr03g0030271 Lupinus albus HOM05D005019 ORTHO05D006625 8.9e-203 710.7 555 66.5
Phvul.006G200700 Phaseolus vulgaris HOM05D005019 ORTHO05D006625 2.0e-202 709.5 556 66.5
DCAR_002684 Daucus carota HOM05D005019 ORTHO05D006625 3.4e-202 708.8 563 66.3
Medtr2g009800 Medicago truncatula HOM05D005019 ORTHO05D006625 4.4e-202 708.4 505 71.1
Nn7g37931 Nelumbo nucifera HOM05D005019 ORTHO05D006625 4.4e-202 708.4 490 71.4
Oeu018172.1 Olea europaea HOM05D005019 ORTHO05D006625 5.8e-202 708.0 502 71.1
Sabra05G0167700 Salix brachista HOM05D005019 ORTHO05D006625 7.5e-202 707.6 492 73.8
ClCG07G000610 Citrullus lanatus HOM05D005019 ORTHO05D006625 3.2e-200 702.2 491 71.7
TPR.G9511 Trifolium pratense HOM05D005019 ORTHO05D006625 3.5e-199 698.7 504 70.4
Psat1g214520 Pisum sativum HOM05D005019 ORTHO05D006625 4.6e-199 698.4 506 70.4
HanXRQChr14g0454081 Helianthus annuus HOM05D005019 ORTHO05D006625 3.0e-198 695.7 502 70.7
SGA_v2.0_scaffold80G25914 Striga asiatica HOM05D005019 ORTHO05D006625 3.9e-198 695.3 514 69.5
Ah.02g113910 Amaranthus hybridus HOM05D005019 ORTHO05D006625 1.1e-197 693.7 505 68.7
Medtr2g101620 Medicago truncatula HOM05D005019 ORTHO05D006625 4.3e-197 691.8 504 68.8
EL10Ac5g11096 Beta vulgaris HOM05D005019 ORTHO05D006625 2.1e-196 689.5 503 69.4
Lj1g0019097 Lotus japonicus HOM05D005019 ORTHO05D006625 2.8e-196 689.1 506 69.8
GSVIVG01003806001 Vitis vinifera HOM05D005019 ORTHO05D006625 1.1e-195 687.2 503 69.8
vmacro14869 Vaccinium macrocarpon HOM05D005019 ORTHO05D006625 1.2e-194 683.7 491 69.9
AUR62008493 Chenopodium quinoa HOM05D005019 ORTHO05D006625 5.8e-194 681.4 505 69.1
AUR62037688 Chenopodium quinoa HOM05D005019 ORTHO05D006625 9.9e-194 680.6 508 69.5
Lsat_1_v5_gn_9_9921 Lactuca sativa HOM05D005019 ORTHO05D006625 1.3e-193 680.2 505 69.3
THA.LOC104806394 Tarenaya hassleriana HOM05D005019 ORTHO05D006625 7.1e-192 674.5 506 67.4
Aa31LG11G14850 Aethionema arabicum HOM05D005019 ORTHO05D006625 9.2e-192 674.1 506 68.8
Thhalv10013183m.g Eutrema salsugineum HOM05D005019 ORTHO05D006625 2.7e-191 672.5 506 68.8
CSS0021329 Camellia sinensis var. sinensis HOM05D005019 ORTHO05D006625 4.6e-191 671.8 504 68.8
Gohir.A05G401500 Gossypium hirsutum HOM05D005019 ORTHO05D006625 7.8e-191 671.0 505 68.9
AT5G14050 Arabidopsis thaliana HOM05D005019 ORTHO05D006625 1.1e-189 667.2 508 67.9
Lsat_1_v5_gn_8_3120 Lactuca sativa HOM05D005019 ORTHO05D006625 1.1e-189 667.2 504 68.7
Carub.0006s1224 Capsella rubella HOM05D005019 ORTHO05D006625 1.9e-189 666.4 510 66.9
RcHm_v2.0_Chr7g0205871 Rosa chinensis HOM05D005019 ORTHO05D006625 3.3e-189 665.6 429 77.9
AL6G24710 Arabidopsis lyrata HOM05D005019 ORTHO05D006625 2.8e-188 662.5 503 68.0
HPP92_026109 Vanilla planifolia HOM05D005019 ORTHO05D006625 3.6e-188 662.1 504 66.1
Sp6g29950 Schrenkiella parvula HOM05D005019 ORTHO05D006625 3.1e-187 659.1 505 67.5
Hund02608 Selenicereus undatus HOM05D005019 ORTHO05D006625 3.1e-187 659.1 508 66.7
CARHR199310 Cardamine hirsuta HOM05D005019 ORTHO05D006625 8.9e-187 657.5 506 67.0
AUR62021601 Chenopodium quinoa HOM05D005019 ORTHO05D006625 4.9e-185 651.7 485 69.1
PSO210G0391 Papaver somniferum HOM05D005019 ORTHO05D006625 1.2e-183 647.1 503 65.8
ATR0564G197 Amborella trichopoda HOM05D005019 ORTHO05D006625 1.5e-181 640.2 503 63.0
PSO210G5187 Papaver somniferum HOM05D005019 ORTHO05D006625 5.6e-181 638.3 503 65.2
Aqoxy6G01670 Aquilegia oxysepala HOM05D005019 ORTHO05D006625 7.3e-181 637.9 503 66.0
AUR62025557 Chenopodium quinoa HOM05D005019 ORTHO05D006625 2.4e-179 632.9 457 69.8
Aqoxy5G00344 Aquilegia oxysepala HOM05D005019 ORTHO05D006625 5.3e-179 631.7 501 65.3
Lj6g0023367 Lotus japonicus HOM05D005019 ORTHO05D006625 4.4e-178 628.6 509 66.6
MBI12_g17287_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D006625 5.8e-178 628.2 502 65.3
Os07g0603200 Oryza sativa ssp. japonica HOM05D005019 ORTHO05D006625 1.3e-174 617.1 505 62.4
unitig_8.g4702 Utricularia gibba HOM05D005019 ORTHO05D006625 1.1e-173 614.0 505 60.0
Zm00001eb227850 Zea mays HOM05D005019 ORTHO05D006625 1.3e-172 610.5 504 60.7
Thecc.05G016300 Theobroma cacao HOM05D005019 ORTHO05D006625 1.4e-171 607.1 423 73.0
SHI13722 Sapria himalayana HOM05D005019 ORTHO05D006625 5.1e-166 588.6 509 59.5
Hma1.2p1_1029F.1_g249600 Hydrangea macrophylla HOM05D005019 ORTHO05D006625 1.1e-163 580.9 348 82.2
Ciclev10006829m.g Citrus clementina HOM05D005019 ORTHO05D006625 2.6e-162 576.2 500 62.8
SEGI_19346 Sequoiadendron giganteum HOM05D005019 ORTHO05D006625 1.4e-160 570.5 507 58.6
CDE04G3201 Ceratophyllum demersum HOM05D005019 ORTHO05D006625 2.1e-159 566.6 431 65.4
HPP92_022900 Vanilla planifolia HOM05D005019 ORTHO05D006625 2.4e-155 553.1 383 70.8
AagrBONN_evm.TU.Sc2ySwM_362.2571 Anthoceros agrestis HOM05D005019 ORTHO05D006625 2.0e-141 506.9 505 52.1
Mapoly0051s0055 Marchantia polymorpha HOM05D005019 ORTHO05D006625 2.5e-141 506.5 446 55.8
CDE02G2819 Ceratophyllum demersum HOM05D005019 ORTHO05D006625 2.2e-137 493.4 409 62.3
SMO356G0724 Selaginella moellendorffii HOM05D005019 ORTHO05D006625 7.7e-130 468.4 507 49.1
QL02p075842 Quercus lobata HOM05D005019 ORTHO05D006625 7.4e-125 451.8 503 52.5
CBR_g21842 Chara braunii HOM05D005019 ORTHO05D006625 1.9e-120 437.2 514 44.7
Rhsim01G0269300 Rhododendron simsii HOM05D005019 ORTHO05D006625 8.8e-118 428.3 258 78.7
Pp3c26_4890 Physcomitrium patens HOM05D005019 ORTHO05D006625 2.9e-113 413.3 453 47.9
Actinidia24938 Actinidia chinensis HOM05D005019 ORTHO05D006625 3.8e-113 412.9 451 54.1
CSS0011909 Camellia sinensis var. sinensis HOM05D005019 ORTHO05D006625 2.9e-105 386.7 501 47.3
AUR62008687 Chenopodium quinoa HOM05D005019 ORTHO05D006625 1.2e-103 381.3 470 48.1
AagrBONN_evm.TU.Sc2ySwM_228.5554 Anthoceros agrestis HOM05D005019 ORTHO05D006625 3.1e-94 350.1 306 56.5
MBI17_g40264_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D006625 1.6e-90 337.8 326 58.6
Cre06.g255950 Chlamydomonas reinhardtii HOM05D005019 ORTHO05D006625 5.0e-89 332.8 473 39.3
MBI17_g13392_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D012924 3.3e-80 303.5 380 48.9
MCO01G264 Micromonas commoda HOM05D005019 ORTHO05D006625 9.6e-72 275.4 459 37.0
PRCOL_00000196 Prasinoderma coloniale HOM05D005019 ORTHO05D006625 7.6e-69 265.8 326 41.4
BcaNung06034 Brassica carinata HOM05D005019 ORTHO05D006625 1.3e-68 265.0 265 56.6
TAR383G0651 Trochodendron aralioides HOM05D005019 ORTHO05D006625 1.6e-55 221.5 505 34.5
BcaB01g06348 Brassica carinata HOM05D005019 ORTHO05D006625 4.1e-38 163.7 242 43.8
Cfa024923 Carpinus fangiana HOM05D005019 ORTHO05D126389 2.6e-37 161.0 588 24.0
MD05G1205300 Malus domestica HOM05D005019 ORTHO05D048639 2.8e-31 141.0 187 47.1
QL02p076237 Quercus lobata HOM05D005019 ORTHO05D006625 1.0e-17 95.9 92 63.0
Zm00001eb227870 Zea mays HOM05D005019 ORTHO05D048639 1.3e-12 79.0 72 56.9
CSS0008724 Camellia sinensis var. sinensis HOM05D006140 ORTHO05D007834 2.8e-07 61.2 53 62.3


User provided reference genes

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