Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008255g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 9.7e-138 493.8 313 100.0
Nitab4.5_0000009g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 6.1e-100 368.2 425 66.4
Cfa020128 Carpinus fangiana HOM05D007176 ORTHO05D009050 9.2e-88 327.8 330 55.8
Sopen06g001340 Solanum pennellii HOM05D007176 ORTHO05D009050 1.7e-86 323.6 346 62.7
Haze_20048 Corylus avellana HOM05D007176 ORTHO05D009050 8.6e-86 321.2 328 64.9
Haze_20055 Corylus avellana HOM05D007176 ORTHO05D009050 8.6e-86 321.2 328 64.9
Peaxi162Scf00258g00925 Petunia axillaris HOM05D007176 ORTHO05D009050 2.8e-84 316.2 347 62.0
vmacro22113 Vaccinium macrocarpon HOM05D007176 ORTHO05D009050 2.0e-82 310.1 329 59.3
PGSC0003DMG400029168 Solanum tuberosum HOM05D007176 ORTHO05D009050 7.5e-82 308.1 343 62.7
Actinidia17284 Actinidia chinensis HOM05D007176 ORTHO05D009050 8.3e-81 304.7 346 62.1
Solyc06g005380.3 Solanum lycopersicum HOM05D007176 ORTHO05D009050 1.6e-79 300.4 343 61.2
CAN.G111.5 Capsicum annuum HOM05D007176 ORTHO05D009050 2.0e-79 300.1 347 60.5
RcHm_v2.0_Chr3g0478871 Rosa chinensis HOM05D007176 ORTHO05D009050 9.5e-77 291.2 350 47.7
Dinv16365 Davidia involucrata HOM05D007176 ORTHO05D009050 1.8e-75 287.0 353 47.0
Thecc.05G178200 Theobroma cacao HOM05D007176 ORTHO05D009050 7.5e-74 281.6 342 46.8
Nn2g15783 Nelumbo nucifera HOM05D007176 ORTHO05D009050 1.7e-73 280.4 347 47.0
Duzib106G0399 Durio zibethinus HOM05D007176 ORTHO05D009050 3.7e-73 279.3 342 45.9
Migut.K00028 Erythranthe guttata HOM05D007176 ORTHO05D009050 1.1e-72 277.7 348 47.4
MBI01_g44281_MAGBIO Magnolia biondii HOM05D007176 ORTHO05D009050 1.4e-72 277.3 300 52.7
QL07p025011 Quercus lobata HOM05D007176 ORTHO05D009050 7.0e-72 275.0 345 46.4
Rhsim04G0094400 Rhododendron simsii HOM05D007176 ORTHO05D009050 2.7e-71 273.1 351 55.0
Gohir.A04G053500 Gossypium hirsutum HOM05D007176 ORTHO05D009050 3.5e-71 272.7 342 46.2
CANSAT64G0938 Cannabis sativa HOM05D007176 ORTHO05D009050 6.0e-71 271.9 337 52.2
MD14G1051600 Malus domestica HOM05D007176 ORTHO05D009050 6.0e-71 271.9 354 51.4
Manes.09G039600 Manihot esculenta HOM05D007176 ORTHO05D009050 3.0e-70 269.6 345 45.2
FvH4_6g21620 Fragaria vesca HOM05D007176 ORTHO05D009050 6.6e-70 268.5 347 45.2
FAN02G0922 Fragaria x ananassa HOM05D007176 ORTHO05D009050 6.6e-70 268.5 347 45.2
FAN14G2546 Fragaria x ananassa HOM05D007176 ORTHO05D009050 6.6e-70 268.5 347 45.2
FAN09G2372 Fragaria x ananassa HOM05D007176 ORTHO05D009050 1.9e-69 266.9 347 44.7
BcaC07g40246 Brassica carinata HOM05D007176 ORTHO05D009050 2.5e-69 266.5 355 43.9
Prupe.7G084400 Prunus persica HOM05D007176 ORTHO05D009050 1.8e-67 260.4 340 47.9
FAN05G5781 Fragaria x ananassa HOM05D007176 ORTHO05D009050 3.1e-67 259.6 353 44.8
A09p51090 Brassica napus HOM05D007176 ORTHO05D009050 4.0e-67 259.2 379 41.7
Aa31LG10G13110 Aethionema arabicum HOM05D007176 ORTHO05D009050 8.9e-67 258.1 355 43.4
CSS0044198 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 8.9e-67 258.1 347 54.8
MD12G1053200 Malus domestica HOM05D007176 ORTHO05D009050 1.5e-66 257.3 349 49.9
Lju124C23T17 Lonicera japonica HOM05D007176 ORTHO05D009050 4.4e-66 255.8 328 47.0
Lsat_1_v5_gn_9_26900 Lactuca sativa HOM05D007176 ORTHO05D009050 5.8e-66 255.4 348 56.6
TAR633G1141 Trochodendron aralioides HOM05D007176 ORTHO05D009050 5.8e-66 255.4 340 43.8
COL.COLO4_29390 Corchorus olitorius HOM05D007176 ORTHO05D009050 9.9e-66 254.6 334 55.1
TAR633G0683 Trochodendron aralioides HOM05D007176 ORTHO05D009050 2.2e-65 253.4 340 43.5
CiPaw.09G027300 Carya illinoinensis HOM05D007176 ORTHO05D009050 2.9e-65 253.1 345 44.3
Potri.006G195800 Populus trichocarpa HOM05D007176 ORTHO05D009050 2.9e-65 253.1 350 46.9
Hma1.2p1_0645F.1_g194890 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 6.4e-65 251.9 358 43.0
Sabra06G0150500 Salix brachista HOM05D007176 ORTHO05D009050 6.4e-65 251.9 337 49.3
Eucgr.K01865 Eucalyptus grandis HOM05D007176 ORTHO05D009050 3.2e-64 249.6 348 42.8
Cpa.g.sc85.35 Carica papaya HOM05D007176 ORTHO05D009050 4.6e-63 245.7 340 46.8
Cc06_g15630 Coffea canephora HOM05D007176 ORTHO05D009050 4.6e-63 245.7 364 51.4
EL10Ac3g06857 Beta vulgaris HOM05D007176 ORTHO05D009050 7.8e-63 245.0 353 42.2
THA.LOC104802720 Tarenaya hassleriana HOM05D007176 ORTHO05D009050 7.8e-63 245.0 344 43.0
C08p33910 Brassica napus HOM05D007176 ORTHO05D009050 6.6e-62 241.9 355 41.1
GSVIVG01033441001 Vitis vinifera HOM05D007176 ORTHO05D009050 8.6e-62 241.5 331 44.4
arahy.Tifrunner.gnm1.ann1.5B5G66 Arachis hypogaea HOM05D007176 ORTHO05D009050 9.5e-61 238.0 347 42.9
PGR142G3952 Punica granatum HOM05D007176 ORTHO05D009050 1.2e-60 237.7 359 46.5
HanXRQChr10g0300591 Helianthus annuus HOM05D007176 ORTHO05D009050 2.0e-58 230.3 343 41.1
Sc13g0002490 Simmondsia chinensis HOM05D007176 ORTHO05D009050 3.4e-58 229.6 312 42.6
SalBow1G6257 Salvia bowleyana HOM05D007176 ORTHO05D009050 1.3e-57 227.6 353 41.1
arahy.Tifrunner.gnm1.ann1.I5CDLA Arachis hypogaea HOM05D007176 ORTHO05D009050 6.4e-57 225.3 360 40.8
CSS0035640 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 3.2e-56 223.0 347 49.9
CARHR168930 Cardamine hirsuta HOM05D007176 ORTHO05D009050 3.2e-56 223.0 343 38.8
Lj5g0009846 Lotus japonicus HOM05D007176 ORTHO05D009050 2.1e-55 220.3 340 40.6
Os02g0281150 Oryza sativa ssp. japonica HOM05D007176 ORTHO05D009050 2.1e-55 220.3 351 43.0
ECA247G1245 Erigeron canadensis HOM05D007176 ORTHO05D009050 2.7e-55 219.9 340 39.7
Atru.BG.213.p Acer truncatum HOM05D007176 ORTHO05D009050 6.6e-54 215.3 342 46.2
Lalb_Chr02g0153821 Lupinus albus HOM05D007176 ORTHO05D009050 1.1e-53 214.5 352 48.6
Sp5g04340 Schrenkiella parvula HOM05D007176 ORTHO05D009050 1.5e-53 214.2 350 39.7
AL5G40300 Arabidopsis lyrata HOM05D007176 ORTHO05D009050 1.1e-51 208.0 347 38.3
Thhalv10006065m.g Eutrema salsugineum HOM05D007176 ORTHO05D009050 4.0e-51 206.1 347 38.6
Carub.0005s2528 Capsella rubella HOM05D007176 ORTHO05D009050 9.9e-50 201.4 347 37.8
SGA_v2.0_scaffold274G46490 Striga asiatica HOM05D007176 ORTHO05D009050 1.4e-48 197.6 160 64.4
TPR.G19346 Trifolium pratense HOM05D007176 ORTHO05D009050 1.4e-48 197.6 390 36.2
Gorai.009G392400 Gossypium raimondii HOM05D007176 ORTHO05D009050 4.2e-48 196.1 299 46.8
AT3G58530 Arabidopsis thaliana HOM05D007176 ORTHO05D009050 5.4e-48 195.7 350 36.9
Zm00001eb237210 Zea mays HOM05D007176 ORTHO05D009050 5.4e-48 195.7 341 46.6
CDE04G3485 Ceratophyllum demersum HOM05D007176 ORTHO05D009050 2.7e-47 193.4 351 36.5
Ciclev10012430m.g Citrus clementina HOM05D007176 ORTHO05D009050 4.6e-47 192.6 187 59.9
Aqoxy279s002 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 6.0e-47 192.2 339 44.2
Aqoxy2G00051 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 6.0e-47 192.2 339 44.2
DCAR_019856 Daucus carota HOM05D007176 ORTHO05D009050 1.7e-46 190.7 284 40.5
AUR62032747 Chenopodium quinoa HOM05D007176 ORTHO05D009050 1.1e-45 188.0 333 37.2
BolC8t50987H Brassica oleracea HOM05D000032 ORTHO05D001620 1.4e-43 181.0 276 40.2
Ah.13g075580 Amaranthus hybridus HOM05D007176 ORTHO05D009050 6.9e-43 178.7 283 38.9
Gohir.D04G094700 Gossypium hirsutum HOM05D007176 ORTHO05D009050 2.9e-41 173.3 276 39.5
PSO675G7508 Papaver somniferum HOM05D007176 ORTHO05D009050 8.4e-41 171.8 291 41.2
unitig_736.g22301 Utricularia gibba HOM05D007176 ORTHO05D009050 1.4e-40 171.0 411 41.8
Hma1.2p1_0645F.1_g194900 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 2.4e-40 170.2 286 38.1
Medtr1g054625 Medicago truncatula HOM05D007176 ORTHO05D009050 1.2e-39 167.9 349 33.8
Hund24819 Selenicereus undatus HOM05D007176 ORTHO05D001610 2.5e-37 160.2 153 77.1
PSO541G4948 Papaver somniferum HOM05D007176 ORTHO05D009050 4.8e-36 156.0 291 36.1
Ca_03573_v3 Cicer arietinum L. HOM05D007176 ORTHO05D009050 4.0e-35 152.9 355 32.1
Glyma.09G105500 Glycine max HOM05D007176 ORTHO05D009050 4.0e-35 152.9 365 31.8
VMungo0720G0788 Vigna mungo HOM05D007176 ORTHO05D009050 2.2e-33 147.1 180 45.6
Atru.chr8.1185 Acer truncatum HOM05D007176 ORTHO05D009050 8.4e-33 145.2 138 67.4
BraA09t40553Z Brassica rapa HOM05D000032 ORTHO05D001620 2.5e-32 143.7 277 35.0
Hund24823 Selenicereus undatus HOM05D007176 ORTHO05D009050 1.6e-31 141.0 147 53.1
BcaC02g10014 Brassica carinata HOM05D007176 ORTHO05D009050 5.6e-29 132.5 292 32.5
HPP92_010126 Vanilla planifolia HOM05D007176 ORTHO05D009050 5.6e-29 132.5 237 36.3
AagrBONN_evm.TU.Sc2ySwM_228.1251 Anthoceros agrestis HOM05D007176 ORTHO05D009050 9.6e-29 131.7 336 38.4
Phvul.007G261900 Phaseolus vulgaris HOM05D007176 ORTHO05D009050 2.1e-28 130.6 146 49.3
Psat6g088000 Pisum sativum HOM05D007176 ORTHO05D009050 4.8e-28 129.4 293 41.6
SMO118G0524 Selaginella moellendorffii HOM05D007176 ORTHO05D009050 4.8e-28 129.4 336 31.0
arahy.Tifrunner.gnm1.ann1.0S64XP Arachis hypogaea HOM05D007176 ORTHO05D009050 7.6e-26 122.1 226 50.0
Pp3c23_2930 Physcomitrium patens HOM05D007176 ORTHO05D009050 7.1e-24 115.5 362 27.6
SEGI_09769 Sequoiadendron giganteum HOM05D007176 ORTHO05D009050 9.3e-24 115.2 289 31.8
BolC4t24963H Brassica oleracea HOM05D000032 ORTHO05D001620 2.7e-23 113.6 273 31.5
C04p33960 Brassica napus HOM05D007176 ORTHO05D009050 2.3e-22 110.5 273 31.5
A04p02540 Brassica napus HOM05D000032 ORTHO05D001620 8.5e-17 92.0 250 30.4
AUR62015309 Chenopodium quinoa HOM05D007176 ORTHO05D009050 2.5e-16 90.5 135 42.2
MBI01_g24087_MAGBIO Magnolia biondii HOM05D007176 ORTHO05D009050 9.4e-16 88.6 56 75.0
HanXRQChr05g0140621 Helianthus annuus HOM05D007176 ORTHO05D009050 1.6e-15 87.8 149 40.9
HanXRQChr10g0316231 Helianthus annuus HOM05D007176 ORTHO05D009050 1.6e-15 87.8 149 40.9
ATR0001G043 Amborella trichopoda HOM05D007176 ORTHO05D009050 7.9e-15 85.5 125 37.6
PRCOL_00005880 Prasinoderma coloniale HOM05D007176 ORTHO05D009050 8.5e-09 65.5 265 24.9
Mapoly0209s0007 Marchantia polymorpha HOM05D007176 ORTHO05D009050 3.2e-08 63.5 126 33.3


User provided reference genes

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