Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008230g0010 Nicotiana tabacum HOM05D002585 ORTHO05D002917 1.4e-69 266.2 136 100.0
Nitab4.5_0003945g0140 Nicotiana tabacum HOM05D002585 ORTHO05D002917 1.2e-52 209.9 136 82.4
PGSC0003DMG400019014 Solanum tuberosum HOM05D002585 ORTHO05D002917 7.8e-52 207.2 140 75.7
Nitab4.5_0005208g0050 Nicotiana tabacum HOM05D002585 ORTHO05D002917 3.0e-51 205.3 139 74.8
Nitab4.5_0000132g0480 Nicotiana tabacum HOM05D002585 ORTHO05D002917 1.5e-50 203.0 139 74.1
Peaxi162Scf00780g01013 Petunia axillaris HOM05D002585 ORTHO05D002917 1.6e-49 199.5 139 76.3
Peaxi162Scf00958g00520 Petunia axillaris HOM05D002585 ORTHO05D002917 2.1e-49 199.1 140 75.7
Peaxi162Scf00247g00111 Petunia axillaris HOM05D002585 ORTHO05D002917 1.8e-48 196.1 137 74.5
Solyc10g083840.1 Solanum lycopersicum HOM05D002585 ORTHO05D002917 5.3e-48 194.5 139 69.8
Nitab4.5_0008265g0020 Nicotiana tabacum HOM05D002585 ORTHO05D002917 6.9e-48 194.1 166 65.1
Sopen10g033280 Solanum pennellii HOM05D002585 ORTHO05D002917 1.2e-47 193.4 139 69.8
Solyc01g056430.2 Solanum lycopersicum HOM05D002585 ORTHO05D002917 2.0e-47 192.6 140 70.7
Peaxi162Scf00110g00619 Petunia axillaris HOM05D002585 ORTHO05D002917 3.4e-47 191.8 139 68.3
PGSC0003DMG400028277 Solanum tuberosum HOM05D002585 ORTHO05D002917 3.2e-45 185.3 136 69.9
PGSC0003DMG401009595 Solanum tuberosum HOM05D002585 ORTHO05D002917 7.9e-44 180.6 124 74.2
Sopen01g025510 Solanum pennellii HOM05D002585 ORTHO05D002917 4.3e-42 174.9 125 70.4
CSS0049154 Camellia sinensis var. sinensis HOM05D002585 ORTHO05D002917 7.4e-42 174.1 138 62.3
Peaxi162Scf00529g00035 Petunia axillaris HOM05D002585 ORTHO05D002917 1.1e-40 170.2 138 65.2
SGA_v2.0_scaffold224G42925 Striga asiatica HOM05D002585 ORTHO05D002917 1.1e-40 170.2 138 62.3
Migut.L01723 Erythranthe guttata HOM05D002585 ORTHO05D002917 2.4e-40 169.1 138 61.6
vmacro07324 Vaccinium macrocarpon HOM05D002585 ORTHO05D002917 5.3e-40 167.9 138 59.4
Rhsim03G0088700 Rhododendron simsii HOM05D002585 ORTHO05D002917 9.0e-40 167.2 133 62.4
QL07p042117 Quercus lobata HOM05D002585 ORTHO05D002917 1.5e-39 166.4 136 61.0
Hma1.2p1_0547F.1_g176480 Hydrangea macrophylla HOM05D002585 ORTHO05D002917 2.6e-39 165.6 138 60.9
Solyc10g083850.3 Solanum lycopersicum HOM05D002585 ORTHO05D002917 2.6e-39 165.6 164 56.7
GSVIVG01033692001 Vitis vinifera HOM05D002585 ORTHO05D002917 3.4e-39 165.2 138 60.9
SalBow5G3646 Salvia bowleyana HOM05D002585 ORTHO05D002917 4.5e-39 164.9 138 60.9
SalBow5G4367 Salvia bowleyana HOM05D002585 ORTHO05D002917 5.8e-39 164.5 138 60.9
MSTRG.26675 Avicennia marina HOM05D002585 ORTHO05D002917 9.9e-39 163.7 138 60.1
Oeu041475.1 Olea europaea HOM05D002585 ORTHO05D002917 1.3e-38 163.3 162 54.9
Lj5g0002795 Lotus japonicus HOM05D002585 ORTHO05D002917 8.4e-38 160.6 135 60.7
MBI17_g25733_MAGBIO Magnolia biondii HOM05D002585 ORTHO05D002917 2.4e-37 159.1 139 57.6
Aa31LG10G8350 Aethionema arabicum HOM05D002585 ORTHO05D002917 3.2e-37 158.7 135 57.8
AL5G34060 Arabidopsis lyrata HOM05D002585 ORTHO05D002917 4.2e-37 158.3 135 56.3
AT3G53180 Arabidopsis thaliana HOM05D002585 ORTHO05D002917 4.2e-37 158.3 135 57.0
Eucgr.A01617 Eucalyptus grandis HOM05D002585 ORTHO05D002917 5.5e-37 157.9 134 57.5
Glyma.10G060200 Glycine max HOM05D002585 ORTHO05D002917 5.5e-37 157.9 133 60.2
Medtr1g062650 Medicago truncatula HOM05D002585 ORTHO05D002917 5.5e-37 157.9 134 58.2
arahy.Tifrunner.gnm1.ann1.7710RN Arachis hypogaea HOM05D002585 ORTHO05D002917 1.6e-36 156.4 135 57.8
arahy.Tifrunner.gnm1.ann1.7YQ2TW Arachis hypogaea HOM05D002585 ORTHO05D002917 1.6e-36 156.4 135 57.8
arahy.Tifrunner.gnm1.ann1.SIB7C5 Arachis hypogaea HOM05D002585 ORTHO05D002917 1.6e-36 156.4 135 57.8
arahy.Tifrunner.gnm1.ann1.YR6AFM Arachis hypogaea HOM05D002585 ORTHO05D002917 1.6e-36 156.4 135 57.8
Cc06_g04600 Coffea canephora HOM05D002585 ORTHO05D002917 1.6e-36 156.4 139 58.3
MD13G1277900 Malus domestica HOM05D002585 ORTHO05D002917 1.6e-36 156.4 133 56.4
A07p21410 Brassica napus HOM05D002585 ORTHO05D002917 2.1e-36 156.0 135 55.6
CARHR163130 Cardamine hirsuta HOM05D002585 ORTHO05D002917 2.1e-36 156.0 135 56.3
BolC6t37286H Brassica oleracea HOM05D002585 ORTHO05D002917 2.7e-36 155.6 135 54.8
Sp5g09150 Schrenkiella parvula HOM05D002585 ORTHO05D002917 2.7e-36 155.6 136 55.1
Medtr1g062620 Medicago truncatula HOM05D002585 ORTHO05D002917 3.5e-36 155.2 134 58.2
TAR369G0251 Trochodendron aralioides HOM05D002585 ORTHO05D002917 4.6e-36 154.8 138 55.1
BcaC07g39674 Brassica carinata HOM05D002585 ORTHO05D002917 6.0e-36 154.5 135 56.3
C08p28400 Brassica napus HOM05D002585 ORTHO05D002917 6.0e-36 154.5 135 56.3
BolC8t50450H Brassica oleracea HOM05D002585 ORTHO05D002917 6.0e-36 154.5 135 56.3
Lalb_Chr21g0315161 Lupinus albus HOM05D002585 ORTHO05D002917 6.0e-36 154.5 135 58.5
BcaC08g44624 Brassica carinata HOM05D002585 ORTHO05D002917 1.0e-35 153.7 135 54.1
PGR004G2132 Punica granatum HOM05D002585 ORTHO05D002917 1.0e-35 153.7 135 57.0
EL10Ac7g16696 Beta vulgaris HOM05D002585 ORTHO05D002917 1.3e-35 153.3 138 53.6
BcaB01g00304 Brassica carinata HOM05D002585 ORTHO05D002917 1.8e-35 152.9 135 55.6
A09p46170 Brassica napus HOM05D002585 ORTHO05D002917 1.8e-35 152.9 135 55.6
C06p21020 Brassica napus HOM05D002585 ORTHO05D002917 1.8e-35 152.9 135 54.1
Lalb_Chr02g0155491 Lupinus albus HOM05D002585 ORTHO05D002917 2.3e-35 152.5 136 55.9
Nn6g35210 Nelumbo nucifera HOM05D002585 ORTHO05D002917 2.3e-35 152.5 139 54.0
Sc20g0005720 Simmondsia chinensis HOM05D002585 ORTHO05D002917 3.0e-35 152.1 138 55.1
THA.LOC104825825 Tarenaya hassleriana HOM05D002585 ORTHO05D002917 5.1e-35 151.4 135 55.6
FvH4_6g16930 Fragaria vesca HOM05D002585 ORTHO05D002917 6.7e-35 151.0 135 55.6
FAN14G4746 Fragaria x ananassa HOM05D002585 ORTHO05D002917 6.7e-35 151.0 135 55.6
RcHm_v2.0_Chr3g0470971 Rosa chinensis HOM05D002585 ORTHO05D002917 6.7e-35 151.0 135 55.6
Nitab4.5_0000181g0090 Nicotiana tabacum HOM05D002585 ORTHO05D002917 1.1e-34 150.2 126 60.3
BraA07t29828Z Brassica rapa HOM05D002585 ORTHO05D002917 1.5e-34 149.8 135 52.6
Ciclev10011061m.g Citrus clementina HOM05D002585 ORTHO05D002917 1.5e-34 149.8 136 55.1
Lsat_1_v5_gn_8_145640 Lactuca sativa HOM05D002585 ORTHO05D002917 1.9e-34 149.4 137 55.5
Phvul.007G152500 Phaseolus vulgaris HOM05D002585 ORTHO05D002917 1.9e-34 149.4 133 56.4
Cpa.g.sc5.155 Carica papaya HOM05D002585 ORTHO05D002917 2.5e-34 149.1 135 53.3
Psat0s3029g0040 Pisum sativum HOM05D002585 ORTHO05D002917 2.5e-34 149.1 133 55.6
RcHm_v2.0_Chr5g0018301 Rosa chinensis HOM05D002585 ORTHO05D002917 2.5e-34 149.1 134 56.7
Thhalv10010120m.g Eutrema salsugineum HOM05D002585 ORTHO05D002917 3.3e-34 148.7 135 54.1
FAN05G4117 Fragaria x ananassa HOM05D002585 ORTHO05D002917 3.3e-34 148.7 135 56.3
FAN05G4263 Fragaria x ananassa HOM05D002585 ORTHO05D002917 3.3e-34 148.7 135 56.3
Duzib093G2252 Durio zibethinus HOM05D002585 ORTHO05D002917 4.3e-34 148.3 135 54.8
BraA09t40081Z Brassica rapa HOM05D002585 ORTHO05D002917 5.6e-34 147.9 134 54.5
PSO063G7003 Papaver somniferum HOM05D002585 ORTHO05D002917 5.6e-34 147.9 137 48.9
FAN02G4184 Fragaria x ananassa HOM05D002585 ORTHO05D002917 7.4e-34 147.5 135 55.6
Hund20555 Selenicereus undatus HOM05D002585 ORTHO05D002917 7.4e-34 147.5 138 50.0
Atru.chr8.1743 Acer truncatum HOM05D002585 ORTHO05D002917 9.6e-34 147.1 136 55.1
Manes.08G013600 Manihot esculenta HOM05D002585 ORTHO05D002917 9.6e-34 147.1 136 55.1
TWI53G0795 Tripterygium wilfordii HOM05D002585 ORTHO05D002917 9.6e-34 147.1 136 51.5
Aqoxy1G01087 Aquilegia oxysepala HOM05D002585 ORTHO05D002917 2.1e-33 146.0 140 50.0
Prupe.7G124800 Prunus persica HOM05D002585 ORTHO05D002917 2.8e-33 145.6 133 52.6
Lalb_Chr21g0315151 Lupinus albus HOM05D002585 ORTHO05D002917 4.8e-33 144.8 134 54.5
Potri.006G121000 Populus trichocarpa HOM05D002585 ORTHO05D002917 4.8e-33 144.8 136 55.1
Actinidia28922 Actinidia chinensis HOM05D002585 ORTHO05D002917 1.1e-32 143.7 124 58.1
ECA233G1422 Erigeron canadensis HOM05D002585 ORTHO05D002917 1.1e-32 143.7 138 54.3
Lj5g0007956 Lotus japonicus HOM05D002585 ORTHO05D002917 1.1e-32 143.7 135 53.3
Sed0022969 Sechium edule HOM05D002585 ORTHO05D002917 1.1e-32 143.7 131 55.0
PSO339G5475 Papaver somniferum HOM05D002585 ORTHO05D002917 1.8e-32 142.9 137 47.4
Cfa021472 Carpinus fangiana HOM05D002585 ORTHO05D002917 2.4e-32 142.5 125 58.4
Sed0026659 Sechium edule HOM05D002585 ORTHO05D002917 2.4e-32 142.5 135 55.6
Thecc.05G072300 Theobroma cacao HOM05D002585 ORTHO05D002917 2.4e-32 142.5 135 51.9
Ca_11569_v3 Cicer arietinum L. HOM05D002585 ORTHO05D002917 5.3e-32 141.4 135 53.3
CANSAT80G1527 Cannabis sativa HOM05D002585 ORTHO05D002917 6.9e-32 141.0 133 54.1
CANSAT80G2890 Cannabis sativa HOM05D002585 ORTHO05D002917 9.0e-32 140.6 133 54.1
Sabra06G0095200 Salix brachista HOM05D002585 ORTHO05D002917 1.2e-31 140.2 136 53.7
Gorai.009G412500 Gossypium raimondii HOM05D002585 ORTHO05D002917 1.5e-31 139.8 135 51.1
Gohir.D04G108400 Gossypium hirsutum HOM05D002585 ORTHO05D002917 2.0e-31 139.4 135 51.1
Sed0005462 Sechium edule HOM05D002585 ORTHO05D002917 2.0e-31 139.4 131 52.7
Nitab4.5_0000217g0060 Nicotiana tabacum HOM05D002585 ORTHO05D002917 2.6e-31 139.0 136 58.1
ClCG04G009500 Citrullus lanatus HOM05D002585 ORTHO05D002917 3.4e-31 138.7 135 52.6
Sed0005893 Sechium edule HOM05D002585 ORTHO05D002917 7.6e-31 137.5 130 50.8
unitig_0.g678 Utricularia gibba HOM05D002585 ORTHO05D002917 7.6e-31 137.5 142 50.7
VMungo0720G0437 Vigna mungo HOM05D002585 ORTHO05D002917 7.6e-31 137.5 146 51.4
Ca_05180_v3 Cicer arietinum L. HOM05D002585 ORTHO05D002917 1.0e-30 137.1 133 48.9
CsaV3_6G040120 Cucumis sativus L. HOM05D002585 ORTHO05D002917 1.0e-30 137.1 135 51.9
Sed0020289 Sechium edule HOM05D002585 ORTHO05D002917 1.3e-30 136.7 129 49.6
ATR0043G008 Amborella trichopoda HOM05D002585 ORTHO05D002917 2.2e-30 136.0 136 49.3
Psat6g074480 Pisum sativum HOM05D002585 ORTHO05D002917 2.9e-30 135.6 136 48.5
HanXRQChr05g0144531 Helianthus annuus HOM05D002585 ORTHO05D002917 6.5e-30 134.4 135 54.8
unitig_8.g4719 Utricularia gibba HOM05D002585 ORTHO05D002917 4.2e-29 131.7 132 50.8
Os10g0456500 Oryza sativa ssp. japonica HOM05D002585 ORTHO05D002917 5.5e-29 131.3 136 50.0
HPP92_008392 Vanilla planifolia HOM05D002585 ORTHO05D002917 9.3e-29 130.6 138 47.8
SHI27836 Sapria himalayana HOM05D002585 ORTHO05D002917 1.6e-28 129.8 135 48.9
Glyma.10G060100 Glycine max HOM05D002585 ORTHO05D002917 2.7e-28 129.0 141 46.8
Medtr1g062710 Medicago truncatula HOM05D002585 ORTHO05D002917 3.5e-28 128.6 135 46.7
Sed0002653 Sechium edule HOM05D002585 ORTHO05D002917 4.6e-28 128.3 131 51.1
Ah.15g091400 Amaranthus hybridus HOM05D002585 ORTHO05D002917 1.8e-27 126.3 117 50.4
Pp3c1_32960 Physcomitrium patens HOM05D002585 ORTHO05D002917 6.7e-27 124.4 136 44.1
Pp3c14_19260 Physcomitrium patens HOM05D002585 ORTHO05D002917 5.7e-26 121.3 136 43.4
VMungo0720G1363 Vigna mungo HOM05D002585 ORTHO05D002917 7.4e-26 120.9 140 43.6
CAN.G541.44 Capsicum annuum HOM05D002585 ORTHO05D002917 1.3e-25 120.2 84 69.0
CANSAT35G1791 Cannabis sativa HOM05D002585 ORTHO05D002917 1.6e-25 119.8 136 47.1
Sopen10g033290 Solanum pennellii HOM05D002585 ORTHO05D002917 3.7e-25 118.6 86 66.3
Phvul.007G152300 Phaseolus vulgaris HOM05D002585 ORTHO05D002917 8.2e-25 117.5 140 42.9
Gorai.002G160800 Gossypium raimondii HOM05D002585 ORTHO05D002917 2.0e-23 112.8 132 45.5
SMO367G0811 Selaginella moellendorffii HOM05D002585 ORTHO05D002917 5.9e-23 111.3 134 44.0
Pp3c21_9940 Physcomitrium patens HOM05D002585 ORTHO05D002917 1.0e-22 110.5 136 41.2
Solyc01g056390.1 Solanum lycopersicum HOM05D002585 ORTHO05D002917 1.3e-22 110.2 76 73.7
Lj3C991T4 Lonicera japonica HOM05D002585 ORTHO05D002917 1.7e-22 109.8 84 63.1
Solyc06g011290.3 Solanum lycopersicum HOM05D002585 ORTHO05D002917 2.5e-21 105.9 90 57.8
Sopen06g005510 Solanum pennellii HOM05D002585 ORTHO05D002917 4.2e-21 105.1 88 59.1
Pp3c22_1270 Physcomitrium patens HOM05D002585 ORTHO05D002917 5.5e-21 104.8 136 39.0
Gohir.D01G129800 Gossypium hirsutum HOM05D002585 ORTHO05D002917 1.2e-20 103.6 132 43.9
TPR.G21013 Trifolium pratense HOM05D002585 ORTHO05D002917 2.1e-20 102.8 111 45.9
Sopen01g019530 Solanum pennellii HOM05D002585 ORTHO05D002917 3.6e-20 102.1 67 74.6
CBR_g37575 Chara braunii HOM05D002585 ORTHO05D002917 1.0e-19 100.5 128 43.0
Dinv37345 Davidia involucrata HOM05D002585 ORTHO05D002917 6.7e-19 97.8 85 55.3
COL.COLO4_26904 Corchorus olitorius HOM05D002585 ORTHO05D002917 1.5e-18 96.7 83 55.4
DCAR_015012 Daucus carota HOM05D002585 ORTHO05D002917 1.5e-18 96.7 84 56.0
QL07p042139 Quercus lobata HOM05D002585 ORTHO05D002917 7.4e-18 94.4 83 55.4
TPR.G21005 Trifolium pratense HOM05D002585 ORTHO05D002917 2.8e-17 92.4 83 55.4
AUR62041382 Chenopodium quinoa HOM05D002585 ORTHO05D002917 1.7e-14 83.2 84 48.8
Sopen01g019520 Solanum pennellii HOM05D002585 ORTHO05D051164 6.1e-12 74.7 56 66.1
CBR_g51531 Chara braunii HOM05D002585 ORTHO05D002917 3.0e-11 72.4 89 44.9
Solyc01g056380.1 Solanum lycopersicum HOM05D002585 ORTHO05D051164 1.3e-09 67.0 56 62.5


User provided reference genes

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