Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008217g0010 Nicotiana tabacum HOM05D005286 ORTHO05D006348 7.3e-77 290.4 140 100.0
Nitab4.5_0004530g0050 Nicotiana tabacum HOM05D005286 ORTHO05D006348 2.1e-39 166.0 102 80.4
Nitab4.5_0000954g0020 Nicotiana tabacum HOM05D005286 ORTHO05D006348 3.5e-39 165.2 97 82.5
Nitab4.5_0000432g0040 Nicotiana tabacum HOM05D005286 ORTHO05D006348 1.7e-38 162.9 97 81.4
Peaxi162Scf00151g00811 Petunia axillaris HOM05D005286 ORTHO05D006348 1.3e-30 136.7 101 68.3
PGSC0003DMG400045338 Solanum tuberosum HOM05D005286 ORTHO05D006348 2.3e-30 136.0 100 67.0
Oeu037874.1 Olea europaea HOM05D005286 ORTHO05D006348 2.1e-28 129.4 101 63.4
Dinv24565 Davidia involucrata HOM05D005286 ORTHO05D006348 1.4e-27 126.7 98 63.3
Solyc12g088020.1 Solanum lycopersicum HOM05D005286 ORTHO05D006348 3.1e-27 125.6 100 62.0
Sopen12g030050 Solanum pennellii HOM05D005286 ORTHO05D006348 1.2e-26 123.6 100 62.0
Nitab4.5_0008592g0010 Nicotiana tabacum HOM05D005286 ORTHO05D006348 9.9e-26 120.6 70 80.0
CSS0004303 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.3e-25 120.2 99 58.6
CSS0034769 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.3e-25 120.2 99 58.6
CSS0038762 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.3e-25 120.2 99 58.6
Thecc.01G137300 Theobroma cacao HOM05D005286 ORTHO05D006348 8.4e-25 117.5 112 55.4
Duzib147G1331 Durio zibethinus HOM05D005286 ORTHO05D006348 1.9e-24 116.3 102 59.8
Lj4A421T8 Lonicera japonica HOM05D005286 ORTHO05D006348 2.4e-24 115.9 100 59.0
Actinidia16523 Actinidia chinensis HOM05D005286 ORTHO05D006348 4.2e-24 115.2 99 59.6
Rhsim08G0000400 Rhododendron simsii HOM05D005286 ORTHO05D006348 5.5e-24 114.8 99 57.6
HanXRQChr01g0017141 Helianthus annuus HOM05D005286 ORTHO05D006348 7.1e-24 114.4 101 60.4
CSS0028284 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 9.3e-24 114.0 97 55.7
CAN.G1104.7 Capsicum annuum HOM05D005286 ORTHO05D006348 9.3e-24 114.0 100 56.0
CSS0007937 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.2e-23 113.6 99 55.6
Duzib187G0999 Durio zibethinus HOM05D005286 ORTHO05D006348 1.2e-23 113.6 102 57.8
Cc07_g21020 Coffea canephora HOM05D005286 ORTHO05D006348 2.7e-23 112.5 100 59.0
vmacro18685 Vaccinium macrocarpon HOM05D005286 ORTHO05D006348 2.7e-23 112.5 99 55.6
MSTRG.23499 Avicennia marina HOM05D005286 ORTHO05D006348 6.0e-23 111.3 102 57.8
Migut.H00797 Erythranthe guttata HOM05D005286 ORTHO05D006348 6.0e-23 111.3 103 56.3
SGA_v2.0_scaffold189G40378 Striga asiatica HOM05D005286 ORTHO05D006348 6.0e-23 111.3 106 54.7
TAR625G0087 Trochodendron aralioides HOM05D005286 ORTHO05D006348 7.9e-23 110.9 98 54.1
CSS0025452 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.0e-22 110.5 100 54.0
FAN23G2334 Fragaria x ananassa HOM05D005286 ORTHO05D006348 1.3e-22 110.2 101 55.4
CiPaw.03G118000 Carya illinoinensis HOM05D005286 ORTHO05D006348 1.8e-22 109.8 99 57.6
FvH4_1g24860 Fragaria vesca HOM05D005286 ORTHO05D006348 2.3e-22 109.4 101 55.4
FAN19G2916 Fragaria x ananassa HOM05D005286 ORTHO05D006348 2.3e-22 109.4 101 55.4
Manes.12G159000 Manihot esculenta HOM05D005286 ORTHO05D006348 2.3e-22 109.4 101 56.4
Lsat_1_v5_gn_1_78000 Lactuca sativa HOM05D005286 ORTHO05D006348 3.0e-22 109.0 101 57.4
Nn5g28436 Nelumbo nucifera HOM05D005286 ORTHO05D006348 3.9e-22 108.6 100 53.0
Atru.chr4.988 Acer truncatum HOM05D005286 ORTHO05D006348 5.1e-22 108.2 98 55.1
Nn1g08960 Nelumbo nucifera HOM05D005286 ORTHO05D006348 5.1e-22 108.2 98 54.1
Gorai.008G094500 Gossypium raimondii HOM05D005286 ORTHO05D006348 6.7e-22 107.8 106 53.8
Prupe.4G274700 Prunus persica HOM05D005286 ORTHO05D006348 6.7e-22 107.8 100 53.0
GSVIVG01022340001 Vitis vinifera HOM05D005286 ORTHO05D006348 6.7e-22 107.8 100 54.0
COL.COLO4_35813 Corchorus olitorius HOM05D005286 ORTHO05D006348 8.7e-22 107.5 102 54.9
Gohir.A12G085400 Gossypium hirsutum HOM05D005286 ORTHO05D006348 8.7e-22 107.5 102 54.9
MD15G1135000 Malus domestica HOM05D005286 ORTHO05D006348 8.7e-22 107.5 102 53.9
FAN26G1990 Fragaria x ananassa HOM05D005286 ORTHO05D006348 1.1e-21 107.1 101 54.5
DCAR_019994 Daucus carota HOM05D005286 ORTHO05D006348 1.9e-21 106.3 100 53.0
FAN28G1250 Fragaria x ananassa HOM05D005286 ORTHO05D006348 1.9e-21 106.3 101 54.5
Hma1.2p1_3117F.1_g332810 Hydrangea macrophylla HOM05D005286 ORTHO05D006348 1.9e-21 106.3 99 56.6
RcHm_v2.0_Chr6g0261231 Rosa chinensis HOM05D005286 ORTHO05D006348 1.9e-21 106.3 98 51.0
unitig_748.g8003 Utricularia gibba HOM05D005286 ORTHO05D006348 1.9e-21 106.3 102 57.8
RcHm_v2.0_Chr2g0122521 Rosa chinensis HOM05D005286 ORTHO05D006348 2.5e-21 105.9 98 51.0
CANSAT35G0194 Cannabis sativa HOM05D005286 ORTHO05D006348 3.3e-21 105.5 102 53.9
Gohir.D12G083400 Gossypium hirsutum HOM05D005286 ORTHO05D006348 4.3e-21 105.1 102 53.9
Gohir.D12G083401 Gossypium hirsutum HOM05D005286 ORTHO05D006348 4.3e-21 105.1 102 53.9
Ciclev10000962m.g Citrus clementina HOM05D005286 ORTHO05D006348 5.6e-21 104.8 100 55.0
QL10p041275 Quercus lobata HOM05D005286 ORTHO05D006348 5.6e-21 104.8 98 53.1
TWI75G1712 Tripterygium wilfordii HOM05D005286 ORTHO05D006348 7.4e-21 104.4 100 53.0
arahy.Tifrunner.gnm1.ann1.7K8RK5 Arachis hypogaea HOM05D005286 ORTHO05D006348 1.3e-20 103.6 111 50.5
arahy.Tifrunner.gnm1.ann1.ZN9YLD Arachis hypogaea HOM05D005286 ORTHO05D006348 1.3e-20 103.6 111 50.5
Hund21799 Selenicereus undatus HOM05D005286 ORTHO05D006348 2.1e-20 102.8 99 49.5
QL10p041267 Quercus lobata HOM05D005286 ORTHO05D006348 2.8e-20 102.4 98 51.0
ECA248G0233 Erigeron canadensis HOM05D005286 ORTHO05D006348 3.7e-20 102.1 101 52.5
Cpa.g.sc37.6 Carica papaya HOM05D005286 ORTHO05D006348 4.8e-20 101.7 98 52.0
Glyma.06G155750 Glycine max HOM05D005286 ORTHO05D006348 8.1e-20 100.9 111 49.5
THA.LOC104818420 Tarenaya hassleriana HOM05D005286 ORTHO05D006348 1.8e-19 99.8 102 49.0
AL8G41150 Arabidopsis lyrata HOM05D005286 ORTHO05D006348 2.4e-19 99.4 100 50.0
Cfa021278 Carpinus fangiana HOM05D005286 ORTHO05D006348 3.1e-19 99.0 101 51.5
PGR119G0364 Punica granatum HOM05D005286 ORTHO05D006348 3.1e-19 99.0 108 50.9
Lj1g0003788 Lotus japonicus HOM05D003519 ORTHO05D004443 4.0e-19 98.6 107 51.4
THA.LOC104819345 Tarenaya hassleriana HOM05D005286 ORTHO05D006348 4.0e-19 98.6 100 52.0
Psat5g059680 Pisum sativum HOM05D005286 ORTHO05D006348 5.3e-19 98.2 108 49.1
Carub.0008s2471 Capsella rubella HOM05D005286 ORTHO05D006348 6.9e-19 97.8 100 48.0
Lalb_Chr23g0272691 Lupinus albus HOM05D005286 ORTHO05D006348 9.0e-19 97.4 112 49.1
TPR.G33580 Trifolium pratense HOM05D005286 ORTHO05D006348 9.0e-19 97.4 107 50.5
AT5G63910 Arabidopsis thaliana HOM05D005286 ORTHO05D006348 1.2e-18 97.1 100 49.0
Thhalv10004131m.g Eutrema salsugineum HOM05D005286 ORTHO05D006348 1.2e-18 97.1 100 48.0
Medtr3g096675 Medicago truncatula HOM05D005286 ORTHO05D006348 1.5e-18 96.7 106 47.2
Sp2g26980 Schrenkiella parvula HOM05D005286 ORTHO05D006348 1.5e-18 96.7 100 48.0
MELO3C008897.2 Cucumis melo HOM05D005286 ORTHO05D006348 2.0e-18 96.3 101 49.5
Aqoxy5G02419 Aquilegia oxysepala HOM05D005286 ORTHO05D006348 2.6e-18 95.9 105 49.5
ClCG04G002290 Citrullus lanatus HOM05D005286 ORTHO05D006348 2.6e-18 95.9 101 49.5
Phvul.009G154600 Phaseolus vulgaris HOM05D005286 ORTHO05D006348 2.6e-18 95.9 107 48.6
Ah.06g191030 Amaranthus hybridus HOM05D005286 ORTHO05D006348 3.4e-18 95.5 104 49.0
VMungo1309G1016 Vigna mungo HOM05D005286 ORTHO05D006348 3.4e-18 95.5 107 47.7
Ca_16981_v3 Cicer arietinum L. HOM05D005286 ORTHO05D006348 4.5e-18 95.1 107 48.6
A06p30530 Brassica napus HOM05D005286 ORTHO05D006348 5.8e-18 94.7 100 49.0
BraA06t26002Z Brassica rapa HOM05D005286 ORTHO05D006348 5.8e-18 94.7 100 49.0
CsaV3_4G030380 Cucumis sativus L. HOM05D005286 ORTHO05D006348 5.8e-18 94.7 101 49.5
Eucgr.I00123 Eucalyptus grandis HOM05D005286 ORTHO05D006348 5.8e-18 94.7 106 46.2
Aa31LG1G17980 Aethionema arabicum HOM05D005286 ORTHO05D006348 7.6e-18 94.4 100 46.0
Sc09g0002230 Simmondsia chinensis HOM05D005286 ORTHO05D006348 7.6e-18 94.4 100 46.0
BcaB02g09762 Brassica carinata HOM05D005286 ORTHO05D006348 1.3e-17 93.6 100 49.0
CSS0025385 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.7e-17 93.2 84 54.8
Potri.007G101600 Populus trichocarpa HOM05D005286 ORTHO05D006348 1.7e-17 93.2 100 53.0
Potri.007G101700 Populus trichocarpa HOM05D005286 ORTHO05D006348 1.7e-17 93.2 100 51.0
EL10Ac4g09623 Beta vulgaris HOM05D005286 ORTHO05D006348 3.8e-17 92.0 101 48.5
ATR0138G018 Amborella trichopoda HOM05D005286 ORTHO05D006348 6.5e-17 91.3 95 50.5
Sabra07G0083800 Salix brachista HOM05D005286 ORTHO05D006348 8.4e-17 90.9 100 50.0
CARHR277830 Cardamine hirsuta HOM05D005286 ORTHO05D006348 1.1e-16 90.5 100 46.0
Sed0025698 Sechium edule HOM05D005286 ORTHO05D006348 1.1e-16 90.5 101 49.5
C03p62500 Brassica napus HOM05D005286 ORTHO05D006348 4.2e-16 88.6 100 48.0
BolC3t18507H Brassica oleracea HOM05D005286 ORTHO05D006348 4.2e-16 88.6 100 48.0
AUR62000514 Chenopodium quinoa HOM05D005286 ORTHO05D006348 4.2e-16 88.6 97 47.4
BcaC01g02644 Brassica carinata HOM05D005286 ORTHO05D006348 5.5e-16 88.2 100 48.0
SEGI_37681 Sequoiadendron giganteum HOM05D005286 ORTHO05D006348 5.5e-16 88.2 98 43.9
AUR62006858 Chenopodium quinoa HOM05D005286 ORTHO05D006348 1.6e-15 86.7 97 47.4
PSO170G0528 Papaver somniferum HOM05D005286 ORTHO05D006348 3.5e-15 85.5 99 44.4
Hund07236 Selenicereus undatus HOM05D005286 ORTHO05D006348 3.5e-15 85.5 104 45.2
CDE08G1426 Ceratophyllum demersum HOM05D005286 ORTHO05D006348 7.9e-15 84.3 98 44.9
MBI06_g35210_MAGBIO Magnolia biondii HOM05D005286 ORTHO05D006348 8.7e-14 80.9 95 46.3
Pp3c3_10560 Physcomitrium patens HOM05D005286 ORTHO05D006348 1.9e-13 79.7 95 41.1
AagrBONN_evm.TU.Sc2ySwM_362.2029 Anthoceros agrestis HOM05D005286 ORTHO05D006348 6.3e-12 74.7 96 41.7
Peaxi162Scf00151g00815 Petunia axillaris HOM05D005286 ORTHO05D006348 8.2e-12 74.3 73 53.4
HPP92_011629 Vanilla planifolia HOM05D005286 ORTHO05D006348 6.9e-11 71.2 110 38.2
SMO119G0327 Selaginella moellendorffii HOM05D005286 ORTHO05D006348 9.0e-11 70.9 99 37.4
Os04g0692800 Oryza sativa ssp. japonica HOM05D005286 ORTHO05D006348 2.2e-09 66.2 103 35.0
Oeu039336.1 Olea europaea HOM05D001574 ORTHO05D006348 1.2e-07 60.5 72 41.7
Zm00001eb434510 Zea mays HOM05D005286 ORTHO05D006348 4.6e-07 58.5 102 34.3
Haze_10873 Corylus avellana HOM05D005286 ORTHO05D006348 6.1e-07 58.2 61 47.5


User provided reference genes

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