Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008213g0040 Nicotiana tabacum HOM05D005710 ORTHO05D004657 2.5e-224 781.9 441 100.0
Nitab4.5_0000565g0150 Nicotiana tabacum HOM05D005710 ORTHO05D004657 1.3e-167 593.6 438 82.9
Peaxi162Scf00166g00643 Petunia axillaris HOM05D005710 ORTHO05D004657 6.6e-108 395.2 406 66.5
CAN.G206.210 Capsicum annuum HOM05D005710 ORTHO05D004657 7.8e-101 371.7 357 67.8
Solyc02g088660.4 Solanum lycopersicum HOM05D005710 ORTHO05D004657 8.4e-79 298.5 219 74.9
Hma1.2p1_0481F.1_g161930 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 4.5e-56 223.0 373 44.0
PGSC0003DMG400001447 Solanum tuberosum HOM05D005710 ORTHO05D004657 3.8e-55 219.9 239 64.0
Sopen02g033380 Solanum pennellii HOM05D005710 ORTHO05D004657 4.6e-53 213.0 238 63.9
Dinv34961 Davidia involucrata HOM05D005710 ORTHO05D004657 3.0e-52 210.3 347 45.8
CSS0045690 Camellia sinensis var. sinensis HOM05D005710 ORTHO05D004657 2.8e-50 203.8 422 41.2
Rhsim08G0074100 Rhododendron simsii HOM05D005710 ORTHO05D004657 2.8e-50 203.8 447 41.6
Oeu025712.1 Olea europaea HOM05D005710 ORTHO05D004657 6.3e-50 202.6 434 42.6
vmacro18155 Vaccinium macrocarpon HOM05D005710 ORTHO05D004657 1.1e-49 201.8 409 42.8
Prupe.3G257800 Prunus persica HOM05D005710 ORTHO05D004657 2.1e-45 187.6 407 42.8
Actinidia07818 Actinidia chinensis HOM05D005710 ORTHO05D004657 3.6e-45 186.8 298 47.7
Actinidia01981 Actinidia chinensis HOM05D005710 ORTHO05D004657 4.6e-45 186.4 408 39.7
MD09G1062500 Malus domestica HOM05D005710 ORTHO05D004657 4.6e-45 186.4 424 39.4
Cc07_g04040 Coffea canephora HOM05D005710 ORTHO05D004657 8.8e-44 182.2 480 35.6
Atru.chr8.406 Acer truncatum HOM05D005710 ORTHO05D004657 2.5e-43 180.6 387 38.8
Cpa.g.sc14.156 Carica papaya HOM05D005710 ORTHO05D004657 2.5e-43 180.6 465 37.6
DCAR_011051 Daucus carota HOM05D005710 ORTHO05D004657 2.5e-43 180.6 425 40.7
SalBow7G3425 Salvia bowleyana HOM05D005710 ORTHO05D004657 2.8e-42 177.2 354 42.7
Thecc.04G091900 Theobroma cacao HOM05D005710 ORTHO05D004657 6.3e-42 176.0 452 37.8
CAN.G206.216 Capsicum annuum HOM05D005710 ORTHO05D004657 1.1e-41 175.3 201 57.2
Cfa007637 Carpinus fangiana HOM05D005710 ORTHO05D004657 3.1e-41 173.7 439 37.8
Migut.K01286 Erythranthe guttata HOM05D005710 ORTHO05D004657 6.9e-41 172.6 479 40.7
Lsat_1_v5_gn_3_98801 Lactuca sativa HOM05D005710 ORTHO05D004657 6.9e-41 172.6 392 39.8
MD00G1156300 Malus domestica HOM05D005710 ORTHO05D004657 9.1e-41 172.2 348 43.1
ECA246G0940 Erigeron canadensis HOM05D005710 ORTHO05D004657 2.6e-40 170.6 332 41.0
COL.COLO4_03731 Corchorus olitorius HOM05D005710 ORTHO05D004657 3.4e-40 170.2 416 36.1
Duzib147G0411 Durio zibethinus HOM05D005710 ORTHO05D004657 7.7e-40 169.1 431 35.5
Ciclev10011685m.g Citrus clementina HOM05D005710 ORTHO05D004657 9.4e-38 162.2 403 38.7
Gohir.A09G010900 Gossypium hirsutum HOM05D005710 ORTHO05D004657 2.7e-37 160.6 419 33.7
Duzib187G0917 Durio zibethinus HOM05D005710 ORTHO05D004657 3.6e-37 160.2 391 36.3
Gohir.D09G010000 Gossypium hirsutum HOM05D005710 ORTHO05D004657 3.6e-37 160.2 420 34.8
VMungo1383G0251 Vigna mungo HOM05D005710 ORTHO05D004657 5.1e-36 156.4 405 38.8
Sabra17G0080200 Salix brachista HOM05D005710 ORTHO05D004657 6.7e-36 156.0 515 33.6
CiPaw.04G057600 Carya illinoinensis HOM05D005710 ORTHO05D004657 3.3e-35 153.7 443 34.5
Lj1g0027832 Lotus japonicus HOM05D005710 ORTHO05D004657 4.4e-35 153.3 416 34.4
HanXRQChr15g0473071 Helianthus annuus HOM05D005710 ORTHO05D004657 5.7e-35 152.9 331 41.1
QL02p039943 Quercus lobata HOM05D005710 ORTHO05D004657 5.7e-35 152.9 336 39.0
Potri.017G091100 Populus trichocarpa HOM05D005710 ORTHO05D004657 1.3e-34 151.8 411 35.0
CANSAT64G1937 Cannabis sativa HOM05D005710 ORTHO05D004657 2.2e-34 151.0 456 34.9
TWI32G0095 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 4.8e-34 149.8 433 35.1
FAN14G2617 Fragaria x ananassa HOM05D005710 ORTHO05D004657 6.3e-34 149.4 432 35.4
Glyma.18G264900 Glycine max HOM05D005710 ORTHO05D004657 6.3e-34 149.4 414 34.8
Manes.01G098200 Manihot esculenta HOM05D005710 ORTHO05D004657 3.1e-33 147.1 462 32.9
TWI60G1009 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 3.1e-33 147.1 406 35.7
SGA_v2.0_scaffold4G02406 Striga asiatica HOM05D005710 ORTHO05D004657 4.1e-33 146.7 414 35.5
Glyma.08G242700 Glycine max HOM05D005710 ORTHO05D004657 5.3e-33 146.4 375 37.1
FvH4_6g47270 Fragaria vesca HOM05D005710 ORTHO05D004657 7.0e-33 146.0 435 34.7
Gorai.006G011600 Gossypium raimondii HOM05D005710 ORTHO05D004657 7.0e-33 146.0 301 38.9
TAR629G0087 Trochodendron aralioides HOM05D005710 ORTHO05D004657 1.5e-32 144.8 359 37.6
arahy.Tifrunner.gnm1.ann1.EE1ZRN Arachis hypogaea HOM05D005710 ORTHO05D004657 2.6e-32 144.1 372 36.6
RcHm_v2.0_Chr2g0166341 Rosa chinensis HOM05D005710 ORTHO05D004657 3.5e-32 143.7 429 35.7
Lalb_Chr17g0337061 Lupinus albus HOM05D005710 ORTHO05D004657 4.5e-32 143.3 380 36.8
Haze_14462 Corylus avellana HOM05D005710 ORTHO05D004657 5.9e-32 142.9 418 35.4
SGA_v2.0_scaffold52G19180 Striga asiatica HOM05D005710 ORTHO05D004657 5.9e-32 142.9 276 41.7
Ah.10g032010 Amaranthus hybridus HOM05D005710 ORTHO05D004657 2.9e-31 140.6 404 36.4
arahy.Tifrunner.gnm1.ann1.B1JWTK Arachis hypogaea HOM05D005710 ORTHO05D004657 5.0e-31 139.8 382 33.8
Hma1.2p1_1813F.1_g303710 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 1.1e-30 138.7 315 38.7
TWI34G1348 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 7.2e-30 136.0 353 37.7
FAN05G5426 Fragaria x ananassa HOM05D005710 ORTHO05D004657 4.7e-29 133.3 307 39.1
FAN09G1437 Fragaria x ananassa HOM05D005710 ORTHO05D004657 4.7e-29 133.3 307 39.1
Sc11g0004700 Simmondsia chinensis HOM05D005710 ORTHO05D004657 4.7e-29 133.3 380 35.0
Phvul.008G035100 Phaseolus vulgaris HOM05D005710 ORTHO05D004657 1.0e-28 132.1 409 33.0
PSO017G2516 Papaver somniferum HOM05D005710 ORTHO05D004657 4.0e-28 130.2 382 33.0
Psat3g200880 Pisum sativum HOM05D005710 ORTHO05D004657 4.0e-28 130.2 376 35.1
Sed0007565 Sechium edule HOM05D005710 ORTHO05D004657 1.5e-27 128.3 420 36.2
Aqoxy3G03578 Aquilegia oxysepala HOM05D005710 ORTHO05D004657 2.6e-27 127.5 311 35.4
PGR004G2722 Punica granatum HOM05D005710 ORTHO05D004657 3.3e-27 127.1 350 37.1
Haze_14452 Corylus avellana HOM05D005710 ORTHO05D004657 5.7e-27 126.3 311 35.4
Eucgr.I01977 Eucalyptus grandis HOM05D005710 ORTHO05D004657 7.5e-27 125.9 430 33.7
CsaV3_5G038440 Cucumis sativus L. HOM05D005710 ORTHO05D004657 1.3e-26 125.2 420 31.9
Medtr7g012940 Medicago truncatula HOM05D005710 ORTHO05D004657 1.3e-26 125.2 433 32.6
PSO478G1813 Papaver somniferum HOM05D005710 ORTHO05D004657 1.3e-26 125.2 378 33.3
TPR.G33463 Trifolium pratense HOM05D005710 ORTHO05D004657 2.8e-26 124.0 360 36.4
MELO3C022025.2 Cucumis melo HOM05D005710 ORTHO05D004657 3.7e-26 123.6 413 32.2
Manes.02G052100 Manihot esculenta HOM05D005710 ORTHO05D004657 3.7e-26 123.6 402 34.1
Hund13162 Selenicereus undatus HOM05D005710 ORTHO05D004657 3.7e-26 123.6 276 37.7
EL10Ac2g03101 Beta vulgaris HOM05D005710 ORTHO05D004657 8.2e-26 122.5 353 34.8
Thhalv10027716m.g Eutrema salsugineum HOM05D005710 ORTHO05D004657 2.4e-25 120.9 170 48.2
AUR62018163 Chenopodium quinoa HOM05D005710 ORTHO05D004657 5.3e-25 119.8 302 36.8
THA.LOC104805502 Tarenaya hassleriana HOM05D005710 ORTHO05D004657 7.0e-25 119.4 213 40.8
AL5G19350 Arabidopsis lyrata HOM05D005710 ORTHO05D004657 9.1e-25 119.0 185 43.2
CARHR154030 Cardamine hirsuta HOM05D005710 ORTHO05D004657 2.7e-24 117.5 319 35.1
AUR62042434 Chenopodium quinoa HOM05D005710 ORTHO05D004657 2.7e-24 117.5 330 32.7
Hund15554 Selenicereus undatus HOM05D005710 ORTHO05D004657 2.7e-24 117.5 396 32.3
Thhalv10003979m.g Eutrema salsugineum HOM05D005710 ORTHO05D004657 5.9e-24 116.3 228 38.6
Carub.0005s0802 Capsella rubella HOM05D005710 ORTHO05D004657 1.0e-23 115.5 164 44.5
THA.LOC104823892 Tarenaya hassleriana HOM05D005710 ORTHO05D004657 1.0e-23 115.5 305 33.4
A06p39970 Brassica napus HOM05D005710 ORTHO05D004657 3.8e-23 113.6 401 31.4
BraA06t26912Z Brassica rapa HOM05D005710 ORTHO05D004657 3.8e-23 113.6 401 31.4
ClCG11G004670 Citrullus lanatus HOM05D005710 ORTHO05D004657 3.8e-23 113.6 188 44.1
A02p36530 Brassica napus HOM05D005710 ORTHO05D004657 1.1e-22 112.1 316 35.1
BraA02t08649Z Brassica rapa HOM05D005710 ORTHO05D004657 1.1e-22 112.1 316 35.1
Sp2g17910 Schrenkiella parvula HOM05D005710 ORTHO05D004657 1.9e-22 111.3 192 42.2
BcaC03g17571 Brassica carinata HOM05D005710 ORTHO05D004657 3.2e-22 110.5 402 33.1
MBI16_g30408_MAGBIO Magnolia biondii HOM05D001913 ORTHO05D001880 4.2e-22 110.2 211 42.7
Aa31LG9G16660 Aethionema arabicum HOM05D005710 ORTHO05D004657 5.5e-22 109.8 189 40.2
C02p55500 Brassica napus HOM05D005710 ORTHO05D004657 9.4e-22 109.0 399 32.3
BolC2t11608H Brassica oleracea HOM05D005710 ORTHO05D004657 9.4e-22 109.0 399 32.3
BcaB07g30084 Brassica carinata HOM05D005710 ORTHO05D004657 1.2e-21 108.6 224 38.8
AT3G29310 Arabidopsis thaliana HOM05D005710 ORTHO05D004657 1.8e-20 104.8 330 33.0
BcaC08g44413 Brassica carinata HOM05D005710 ORTHO05D004657 2.0e-19 101.3 432 29.9
C06p18500 Brassica napus HOM05D005710 ORTHO05D004657 2.0e-19 101.3 432 29.9
CDE07G0246 Ceratophyllum demersum HOM05D001913 ORTHO05D001880 2.6e-19 100.9 211 37.4
BolC6t37063H Brassica oleracea HOM05D005710 ORTHO05D004657 2.8e-18 97.4 302 32.1
Zm00001eb352990 Zea mays HOM05D005710 ORTHO05D004657 6.3e-18 96.3 112 50.9
BcaB02g07987 Brassica carinata HOM05D005710 ORTHO05D004657 1.8e-17 94.7 447 26.8
Aa31LG2G3970 Aethionema arabicum HOM05D005710 ORTHO05D004657 4.1e-17 93.6 222 35.6
Os05g0512400 Oryza sativa ssp. japonica HOM05D005710 ORTHO05D004657 5.4e-17 93.2 182 37.9
HPP92_019480 Vanilla planifolia HOM05D005710 ORTHO05D004657 2.7e-16 90.9 159 39.0
C07p38200 Brassica napus HOM05D005710 ORTHO05D004657 4.2e-14 83.6 206 36.9
SalBow2G0426 Salvia bowleyana HOM05D005710 ORTHO05D004657 5.5e-14 83.2 134 41.8
Migut.K01288 Erythranthe guttata HOM05D005710 ORTHO05D004657 9.4e-14 82.4 279 31.5
Nn4g23370 Nelumbo nucifera HOM05D005710 ORTHO05D004657 3.5e-08 63.9 253 27.7
Oeu000861.1 Olea europaea HOM05D005710 ORTHO05D004657 4.5e-08 63.5 64 60.9
SalBow3G1747 Salvia bowleyana HOM05D005710 ORTHO05D004657 2.3e-07 61.2 184 31.5
Atru.chr1.716 Acer truncatum HOM05D005186 ORTHO05D006278 1.5e-06 58.5 159 30.2
SEGI_24397 Sequoiadendron giganteum HOM05D005186 ORTHO05D006278 1.9e-06 58.2 111 31.5
GSVIVG01011503001 Vitis vinifera HOM05D005710 ORTHO05D004657 1.9e-06 58.2 76 44.7
Lj1g0011465 Lotus japonicus HOM05D005220 ORTHO05D006082 5.6e-06 56.6 84 48.8
THA.LOC104821410 Tarenaya hassleriana HOM05D005186 ORTHO05D006278 5.6e-06 56.6 126 31.7


User provided reference genes

Program Settings