Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008210g0010 Nicotiana tabacum HOM05D007320 ORTHO05D009290 5.8e-189 664.1 339 100.0
Nitab4.5_0001895g0020 Nicotiana tabacum HOM05D007320 ORTHO05D009290 1.0e-156 557.0 333 87.7
CAN.G756.7 Capsicum annuum HOM05D007320 ORTHO05D009290 7.2e-147 524.2 328 83.2
PGSC0003DMG400001712 Solanum tuberosum HOM05D007320 ORTHO05D009290 3.4e-144 515.4 328 80.5
Sopen01g035350 Solanum pennellii HOM05D007320 ORTHO05D009290 1.8e-142 509.6 328 79.9
Solyc01g088490.3 Solanum lycopersicum HOM05D007320 ORTHO05D009290 4.5e-141 505.0 328 79.0
Peaxi162Scf00745g00038 Petunia axillaris HOM05D007320 ORTHO05D009290 3.7e-127 458.8 328 75.0
Atru.chr6.2840 Acer truncatum HOM05D007320 ORTHO05D009290 7.1e-110 401.4 310 62.9
MSTRG.20317 Avicennia marina HOM05D007320 ORTHO05D009290 1.0e-108 397.5 314 63.4
Cc05_g07980 Coffea canephora HOM05D007320 ORTHO05D009290 2.1e-106 389.8 310 65.2
Actinidia11122 Actinidia chinensis HOM05D007320 ORTHO05D009290 6.2e-106 388.3 311 61.4
TWI59G0750 Tripterygium wilfordii HOM05D007320 ORTHO05D009290 1.2e-104 384.0 310 61.6
Ciclev10017507m.g Citrus clementina HOM05D007320 ORTHO05D009290 1.5e-104 383.6 310 60.3
CiPaw.04G130300 Carya illinoinensis HOM05D007320 ORTHO05D009290 4.4e-104 382.1 310 63.2
Glyma.12G208100 Glycine max HOM05D007320 ORTHO05D009290 1.3e-103 380.6 313 59.4
Oeu000571.1 Olea europaea HOM05D007320 ORTHO05D009290 4.9e-103 378.6 311 63.3
Ca_01474_v3 Cicer arietinum L. HOM05D007320 ORTHO05D009290 2.4e-102 376.3 317 59.0
VMungo1080G0443 Vigna mungo HOM05D007320 ORTHO05D009290 2.4e-102 376.3 299 62.9
Phvul.005G098950 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 7.8e-101 371.3 313 59.4
SGA_v2.0_scaffold313G48283 Striga asiatica HOM05D007320 ORTHO05D009290 1.5e-99 367.1 326 57.4
Manes.13G139600 Manihot esculenta HOM05D007320 ORTHO05D009290 7.3e-99 364.8 322 58.1
Migut.C00284 Erythranthe guttata HOM05D007320 ORTHO05D009290 6.2e-98 361.7 320 58.4
Migut.L01118 Erythranthe guttata HOM05D007320 ORTHO05D009290 6.2e-98 361.7 324 57.1
SalBow8G4737 Salvia bowleyana HOM05D007320 ORTHO05D009290 8.1e-98 361.3 308 60.7
Dinv15897 Davidia involucrata HOM05D007320 ORTHO05D009290 1.4e-97 360.5 323 59.1
Lalb_Chr25g0279081 Lupinus albus HOM05D007320 ORTHO05D009290 1.8e-97 360.1 329 54.7
Lj1P690T28 Lonicera japonica HOM05D007320 ORTHO05D009290 6.9e-97 358.2 309 60.2
Gohir.A05G253000 Gossypium hirsutum HOM05D007320 ORTHO05D009290 9.0e-97 357.8 310 59.0
GSVIVG01020656001 Vitis vinifera HOM05D007320 ORTHO05D009290 2.0e-96 356.7 323 58.5
Dinv19981 Davidia involucrata HOM05D007320 ORTHO05D009290 2.6e-96 356.3 297 61.3
Gohir.D05G254900 Gossypium hirsutum HOM05D007320 ORTHO05D009290 2.6e-96 356.3 310 59.0
Gorai.009G266400 Gossypium raimondii HOM05D007320 ORTHO05D009290 3.4e-96 355.9 310 58.7
SalBow8G5340 Salvia bowleyana HOM05D007320 ORTHO05D009290 5.8e-96 355.1 308 60.4
ClCG02G009070 Citrullus lanatus HOM05D007320 ORTHO05D009290 1.7e-95 353.6 317 54.3
Cpa.g.sc209.6 Carica papaya HOM05D007320 ORTHO05D009290 4.9e-95 352.1 321 57.3
Hund07849 Selenicereus undatus HOM05D007320 ORTHO05D009290 4.9e-95 352.1 311 56.3
Medtr2g090885 Medicago truncatula HOM05D007320 ORTHO05D009290 1.1e-94 350.9 317 55.2
Migut.D01592 Erythranthe guttata HOM05D007320 ORTHO05D009290 5.4e-94 348.6 320 58.4
ECA234G2345 Erigeron canadensis HOM05D007320 ORTHO05D009290 7.1e-94 348.2 298 58.7
Nn3g20750 Nelumbo nucifera HOM05D007320 ORTHO05D009290 1.6e-93 347.1 316 57.3
Cfa014690 Carpinus fangiana HOM05D007320 ORTHO05D009290 2.1e-93 346.7 310 58.4
HanXRQChr17g0565321 Helianthus annuus HOM05D007320 ORTHO05D009290 7.8e-93 344.7 298 57.0
Haze_13306 Corylus avellana HOM05D007320 ORTHO05D009290 1.7e-92 343.6 314 57.6
vmacro12358 Vaccinium macrocarpon HOM05D007320 ORTHO05D009290 3.0e-92 342.8 313 55.9
CSS0012636 Camellia sinensis var. sinensis HOM05D007320 ORTHO05D009290 8.7e-92 341.3 311 56.9
Lj3g0010689 Lotus japonicus HOM05D007320 ORTHO05D009290 1.1e-91 340.9 313 56.2
Rhsim06G0135200 Rhododendron simsii HOM05D007320 ORTHO05D009290 1.5e-91 340.5 311 55.9
Prupe.3G125800 Prunus persica HOM05D007320 ORTHO05D009290 1.9e-91 340.1 324 55.9
COL.COLO4_26851 Corchorus olitorius HOM05D007320 ORTHO05D009290 3.3e-91 339.3 313 55.9
CsaV3_2G004500 Cucumis sativus L. HOM05D007320 ORTHO05D009290 4.8e-90 335.5 311 52.7
RcHm_v2.0_Chr0c20g0500221 Rosa chinensis HOM05D007320 ORTHO05D009290 1.1e-89 334.3 305 55.4
FvH4_7g08410 Fragaria vesca HOM05D007320 ORTHO05D009290 1.4e-89 334.0 305 56.4
Hma1.2p1_0002F.1_g002500 Hydrangea macrophylla HOM05D007320 ORTHO05D009290 3.1e-89 332.8 294 59.5
FAN10G1335 Fragaria x ananassa HOM05D007320 ORTHO05D009290 4.0e-89 332.4 305 56.1
Lsat_1_v5_gn_4_28301 Lactuca sativa HOM05D007320 ORTHO05D009290 6.9e-89 331.6 290 54.5
FAN03G0990 Fragaria x ananassa HOM05D007320 ORTHO05D009290 1.5e-88 330.5 305 55.7
FAN10G4046 Fragaria x ananassa HOM05D007320 ORTHO05D009290 1.5e-88 330.5 305 55.7
Thecc.08G174300 Theobroma cacao HOM05D007320 ORTHO05D009290 3.4e-88 329.3 310 56.1
TPR.G6440 Trifolium pratense HOM05D007320 ORTHO05D009290 3.4e-88 329.3 311 55.0
MD09G1241100 Malus domestica HOM05D007320 ORTHO05D009290 9.9e-88 327.8 336 53.9
Sabra13G0103100 Salix brachista HOM05D007320 ORTHO05D009290 4.9e-87 325.5 336 53.0
Psat5g275040 Pisum sativum HOM05D007320 ORTHO05D009290 7.1e-86 321.6 319 53.0
Aa31LG1G7290 Aethionema arabicum HOM05D007320 ORTHO05D009290 1.2e-85 320.9 306 55.2
Potri.013G124100 Populus trichocarpa HOM05D007320 ORTHO05D009290 3.0e-84 316.2 336 52.1
CANSAT64G2476 Cannabis sativa HOM05D007320 ORTHO05D009290 6.7e-84 315.1 312 51.9
Sed0016711 Sechium edule HOM05D007320 ORTHO05D009290 1.9e-83 313.5 306 52.0
unitig_62.g23164 Utricularia gibba HOM05D007320 ORTHO05D009290 1.9e-83 313.5 330 49.4
TAR627G0001 Trochodendron aralioides HOM05D007320 ORTHO05D009290 1.1e-81 307.8 312 55.4
MBI06_g25716_MAGBIO Magnolia biondii HOM05D007320 ORTHO05D009290 3.1e-81 306.2 312 54.2
AT1G06270 Arabidopsis thaliana HOM05D007320 ORTHO05D009290 6.4e-79 298.5 306 52.6
Thhalv10008110m.g Eutrema salsugineum HOM05D007320 ORTHO05D009290 6.4e-79 298.5 306 52.3
THA.LOC104800856 Tarenaya hassleriana HOM05D007320 ORTHO05D009290 6.4e-79 298.5 306 52.6
DCAR_013053 Daucus carota HOM05D007320 ORTHO05D009290 1.1e-78 297.7 291 53.3
Sp1g05080 Schrenkiella parvula HOM05D007320 ORTHO05D009290 5.5e-78 295.4 333 49.8
BcaB02g06809 Brassica carinata HOM05D007320 ORTHO05D009290 1.2e-77 294.3 306 52.0
CARHR005830 Cardamine hirsuta HOM05D007320 ORTHO05D009290 1.2e-77 294.3 306 51.6
Carub.0001s0564 Capsella rubella HOM05D007320 ORTHO05D009290 2.7e-77 293.1 306 51.6
AL1G16280 Arabidopsis lyrata HOM05D007320 ORTHO05D009290 3.5e-77 292.7 306 52.0
Sc07g0005270 Simmondsia chinensis HOM05D007320 ORTHO05D009290 4.6e-77 292.4 313 50.8
C05p04580 Brassica napus HOM05D007320 ORTHO05D009290 3.0e-76 289.7 307 51.5
Eucgr.F01954 Eucalyptus grandis HOM05D007320 ORTHO05D009290 3.9e-76 289.3 295 51.9
EL10Ac2g02568 Beta vulgaris HOM05D007320 ORTHO05D009290 6.7e-76 288.5 326 49.4
A10p04990 Brassica napus HOM05D007320 ORTHO05D009290 6.7e-76 288.5 307 51.5
BraA10t42760Z Brassica rapa HOM05D007320 ORTHO05D009290 6.7e-76 288.5 307 51.5
AUR62035379 Chenopodium quinoa HOM05D007320 ORTHO05D009290 6.7e-76 288.5 305 51.1
BolC5t29229H Brassica oleracea HOM05D007320 ORTHO05D009290 2.5e-75 286.6 298 52.3
BcaC05g24288 Brassica carinata HOM05D007320 ORTHO05D009290 3.3e-75 286.2 298 52.0
TPR.G5736 Trifolium pratense HOM05D007320 ORTHO05D009290 3.3e-75 286.2 264 55.7
TPR.G34643 Trifolium pratense HOM05D007320 ORTHO05D009290 7.1e-70 268.5 196 67.9
SHI10502 Sapria himalayana HOM05D007320 ORTHO05D009290 3.7e-66 256.1 307 47.2
PGR083G2305 Punica granatum HOM05D007320 ORTHO05D009290 3.6e-61 239.6 296 44.3
MELO3C004341.2 Cucumis melo HOM05D007320 ORTHO05D009290 1.4e-60 237.7 214 54.2
AUR62024073 Chenopodium quinoa HOM05D007320 ORTHO05D009290 1.4e-54 217.6 221 51.6
Phvul.005G098533 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 1.7e-50 204.1 157 66.2
arahy.Tifrunner.gnm1.ann1.CSM94Q Arachis hypogaea HOM05D007320 ORTHO05D009290 2.4e-41 173.7 159 51.6
arahy.Tifrunner.gnm1.ann1.66V1NK Arachis hypogaea HOM05D007320 ORTHO05D009290 9.1e-41 171.8 144 55.6
Cpa.g.sc209.4 Carica papaya HOM05D007320 ORTHO05D009290 4.2e-38 162.9 154 57.8
PGSC0003DMG401001710 Solanum tuberosum HOM05D007320 ORTHO05D009290 8.8e-36 155.2 107 75.7
SalBow7G0970 Salvia bowleyana HOM05D000555 ORTHO05D000646 2.5e-30 137.1 136 53.7
Sc21g0003330 Simmondsia chinensis HOM05D007320 ORTHO05D009290 7.2e-30 135.6 172 48.3
Sc21g0003340 Simmondsia chinensis HOM05D007320 ORTHO05D009290 1.8e-20 104.4 76 64.5
Peaxi162Scf00102g01049 Petunia axillaris HOM05D007320 ORTHO05D009290 1.5e-19 101.3 77 72.7
arahy.Tifrunner.gnm1.ann1.5PR57S Arachis hypogaea HOM05D007320 ORTHO05D009290 1.3e-18 98.2 114 51.8
Dinv15900 Davidia involucrata HOM05D007320 ORTHO05D009290 1.4e-17 94.7 164 35.4
MELO3C021360.2 Cucumis melo HOM05D007320 ORTHO05D009290 2.8e-13 80.5 147 32.7
Medtr8g005870 Medicago truncatula HOM05D007700 ORTHO05D009669 2.9e-10 70.5 144 27.1
Atru.chr3.942 Acer truncatum HOM05D007700 ORTHO05D009669 4.9e-10 69.7 195 27.2
Sed0015131 Sechium edule HOM05D000242 ORTHO05D009669 1.2e-08 65.1 222 25.7
GSVIVG01025536001 Vitis vinifera HOM05D000855 ORTHO05D008530 7.8e-08 62.4 185 28.6
MBI13_g05940_MAGBIO Magnolia biondii HOM05D000424 ORTHO05D000355 1.3e-07 61.6 178 27.0
Manes.09G043000 Manihot esculenta HOM05D006596 ORTHO05D008497 3.0e-07 60.5 93 38.7
PSO541G2034 Papaver somniferum HOM05D000424 ORTHO05D000355 3.0e-07 60.5 199 24.1
Sed0017496 Sechium edule HOM05D000855 ORTHO05D008530 3.0e-07 60.5 182 26.4
ClCG01G020760 Citrullus lanatus HOM05D007700 ORTHO05D009669 3.9e-07 60.1 135 28.1
AUR62040505 Chenopodium quinoa HOM05D000855 ORTHO05D008530 6.6e-07 59.3 172 30.2
AUR62042604 Chenopodium quinoa HOM05D000855 ORTHO05D008530 6.6e-07 59.3 172 30.2
Dinv35708 Davidia involucrata HOM05D000855 ORTHO05D008530 8.6e-07 58.9 178 27.5
FAN13G2474 Fragaria x ananassa HOM05D002007 ORTHO05D000355 8.6e-07 58.9 68 38.2
SalBow3G1200 Salvia bowleyana HOM05D000855 ORTHO05D008530 1.5e-06 58.2 170 28.2
SalBow3G1712 Salvia bowleyana HOM05D000855 ORTHO05D008530 1.5e-06 58.2 170 28.2
MELO3C009312.2 Cucumis melo HOM05D000855 ORTHO05D008530 2.5e-06 57.4 182 26.4
ClCG10G020580 Citrullus lanatus HOM05D001673 ORTHO05D002312 3.3e-06 57.0 182 26.4
MELO3C007960.2 Cucumis melo HOM05D007700 ORTHO05D009669 3.3e-06 57.0 135 27.4
Cfa013418 Carpinus fangiana HOM05D000602 ORTHO05D007338 4.3e-06 56.6 196 21.9
CsaV3_6G047710 Cucumis sativus L. HOM05D007700 ORTHO05D009669 4.3e-06 56.6 135 26.7
Gorai.003G004000 Gossypium raimondii HOM05D007700 ORTHO05D009669 5.6e-06 56.2 188 22.9
Prupe.6G241600 Prunus persica HOM05D000855 ORTHO05D008530 7.3e-06 55.8 180 27.2


User provided reference genes

Program Settings