Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 1.5e-50 202.6 109 100.0
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 5.9e-50 200.7 107 100.0
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 1.9e-48 195.7 109 96.3
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 2.8e-44 181.8 108 89.8
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 2.4e-43 178.7 109 87.2
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 2.4e-43 178.7 109 87.2
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 2.6e-42 175.3 109 85.3
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 1.1e-35 153.3 104 77.9
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 5.3e-35 151.0 104 75.0
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 2.0e-34 149.1 104 75.0
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 4.5e-34 147.9 104 75.0
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 1.3e-33 146.4 101 72.3
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 2.2e-33 145.6 102 72.5
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 5.0e-33 144.4 101 75.2
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 1.1e-32 143.3 104 73.1
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 1.5e-32 142.9 98 73.5
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 4.2e-32 141.4 99 73.7
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 7.2e-32 140.6 100 75.0
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 1.6e-31 139.4 102 70.6
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 1.6e-31 139.4 98 73.5
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 2.1e-31 139.0 102 72.5
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 2.1e-31 139.0 102 72.5
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 2.7e-31 138.7 102 72.5
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 2.7e-31 138.7 101 69.3
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 2.7e-31 138.7 102 71.6
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 3.6e-31 138.3 102 71.6
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 3.6e-31 138.3 108 69.4
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 3.6e-31 138.3 103 71.8
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 4.7e-31 137.9 104 71.2
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 4.7e-31 137.9 102 71.6
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 4.7e-31 137.9 102 70.6
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 6.1e-31 137.5 106 67.0
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 6.1e-31 137.5 102 71.6
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 6.1e-31 137.5 102 71.6
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 8.0e-31 137.1 102 70.6
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 1.0e-30 136.7 99 70.7
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 1.0e-30 136.7 105 67.6
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 1.0e-30 136.7 105 67.6
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 1.0e-30 136.7 102 71.6
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 1.4e-30 136.3 100 69.0
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 1.4e-30 136.3 103 68.9
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 1.8e-30 136.0 100 70.0
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 1.8e-30 136.0 100 70.0
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 1.8e-30 136.0 100 73.0
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 2.3e-30 135.6 109 67.9
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 2.3e-30 135.6 100 69.0
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 3.0e-30 135.2 102 70.6
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 4.0e-30 134.8 102 69.6
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 4.0e-30 134.8 102 69.6
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 5.2e-30 134.4 103 70.9
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 6.8e-30 134.0 102 67.6
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 6.8e-30 134.0 99 70.7
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 6.8e-30 134.0 125 64.0
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 1.2e-29 133.3 102 65.7
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 1.2e-29 133.3 98 70.4
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 2.0e-29 132.5 102 67.6
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 3.4e-29 131.7 102 66.7
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 3.4e-29 131.7 100 64.0
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 3.4e-29 131.7 100 67.0
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 4.4e-29 131.3 101 68.3
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 5.7e-29 131.0 102 66.7
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 9.8e-29 130.2 99 68.7
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 9.8e-29 130.2 100 66.0
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 1.3e-28 129.8 103 65.0
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 1.3e-28 129.8 101 67.3
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 1.3e-28 129.8 102 64.7
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 1.3e-28 129.8 100 67.0
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 1.7e-28 129.4 109 67.0
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 1.7e-28 129.4 101 66.3
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 2.2e-28 129.0 99 64.6
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 2.2e-28 129.0 101 67.3
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 2.8e-28 128.6 99 65.7
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 2.8e-28 128.6 99 65.7
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 2.8e-28 128.6 99 65.7
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 2.8e-28 128.6 99 65.7
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 3.7e-28 128.3 101 65.3
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 3.7e-28 128.3 101 65.3
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 3.7e-28 128.3 103 67.0
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 3.7e-28 128.3 99 64.6
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 8.3e-28 127.1 103 66.0
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 8.3e-28 127.1 100 61.0
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 1.8e-27 125.9 99 64.6
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 1.8e-27 125.9 103 64.1
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 2.4e-27 125.6 103 65.0
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 4.1e-27 124.8 99 65.7
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 4.1e-27 124.8 100 64.0
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 7.0e-27 124.0 99 62.6
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 7.0e-27 124.0 110 62.7
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 7.0e-27 124.0 98 65.3
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 9.1e-27 123.6 99 63.6
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 9.1e-27 123.6 157 52.2
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 1.2e-26 123.2 105 57.1
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 1.6e-26 122.9 107 60.7
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 4.5e-26 121.3 99 62.6
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 5.9e-26 120.9 101 64.4
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 2.9e-25 118.6 105 56.2
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 3.8e-25 118.2 105 57.1
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 1.5e-24 116.3 103 63.1
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 1.9e-24 115.9 102 60.8
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 7.2e-24 114.0 103 62.1
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 2.1e-23 112.5 104 63.5
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 8.0e-23 110.5 83 66.3
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 1.5e-21 106.3 83 67.5
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 2.6e-21 105.5 96 56.2
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 4.4e-21 104.8 79 68.4
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 1.3e-20 103.2 77 70.1
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 3.7e-20 101.7 76 68.4
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 3.7e-20 101.7 76 69.7
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 6.3e-20 100.9 176 39.2
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 1.8e-19 99.4 78 66.7
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 1.8e-19 99.4 77 67.5
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 2.4e-19 99.0 76 67.1
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 2.4e-19 99.0 102 47.1
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 3.5e-18 95.1 78 61.5
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 1.7e-17 92.8 75 62.7
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 2.3e-17 92.4 83 59.0
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 1.5e-16 89.7 77 61.0
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 4.3e-16 88.2 74 60.8
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 1.2e-15 86.7 108 45.4
Peaxi162Scf00545g00027 Petunia axillaris HOM05D002674 ORTHO05D008041 3.4e-13 78.6 51 74.5
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 1.4e-11 73.2 106 42.5
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 7.0e-11 70.9 100 40.0
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 1.0e-09 67.0 55 63.6
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 3.0e-09 65.5 83 44.6
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 3.0e-09 65.5 83 44.6
CBR_g24042 Chara braunii HOM05D002674 ORTHO05D008041 8.0e-07 57.4 110 34.5
PSO832G3862 Papaver somniferum HOM05D001297 ORTHO05D001135 3.1e-06 55.5 77 42.9


User provided reference genes

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