Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008204g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 8.8e-102 373.6 190 100.0
Nitab4.5_0017311g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.2e-83 312.0 198 82.8
Nitab4.5_0003882g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.3e-78 295.8 227 70.9
Nitab4.5_0000300g0220 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.3e-76 290.0 225 69.8
Nitab4.5_0000836g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.5e-74 282.0 239 65.3
Nitab4.5_0005492g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.3e-70 269.2 239 64.0
Nitab4.5_0001586g0180 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.7e-68 263.1 189 76.2
Nitab4.5_0011017g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.2e-68 262.7 226 65.9
Nitab4.5_0006184g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.4e-62 243.4 239 60.3
Nitab4.5_0022539g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.2e-59 231.9 205 62.9
Nitab4.5_0005533g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.1e-57 224.9 189 66.1
Nitab4.5_0024231g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.4e-53 211.8 281 49.8
Nitab4.5_0000232g0170 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.1e-41 171.8 98 88.8
Nitab4.5_0000078g0230 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.5e-40 170.2 174 59.8
Nitab4.5_0005584g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.3e-40 169.1 98 86.7
Nitab4.5_0007928g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.6e-40 167.5 98 85.7
Nitab4.5_0005857g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.1e-38 162.5 98 83.7
Nitab4.5_0005719g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.3e-38 161.8 97 84.5
Nitab4.5_0003317g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.5e-37 158.7 165 55.8
Nitab4.5_0002555g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-35 154.1 98 81.6
Nitab4.5_0006406g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-35 154.1 98 80.6
Nitab4.5_0002555g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.5e-35 152.9 91 84.6
Nitab4.5_0004315g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.3e-35 151.0 97 80.4
Nitab4.5_0005517g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.5e-34 149.1 87 82.8
Nitab4.5_0000109g0010 Nicotiana tabacum HOM05D000995 ORTHO05D010478 6.0e-34 148.3 91 82.4
Nitab4.5_0000423g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.3e-33 147.1 91 82.4
Nitab4.5_0002671g0070 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.9e-33 145.6 102 75.5
Nitab4.5_0004315g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.9e-33 145.6 91 81.3
Nitab4.5_0002766g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.1e-33 145.2 98 77.6
Nitab4.5_0002340g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-32 144.1 82 86.6
Nitab4.5_0001101g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.3e-32 142.1 91 76.9
Nitab4.5_0001081g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 5.7e-32 141.7 85 82.4
Nitab4.5_0022539g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 5.7e-32 141.7 91 82.4
Nitab4.5_0002671g0080 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.3e-31 140.6 91 82.4
Nitab4.5_0007540g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.6e-31 140.2 98 78.6
Nitab4.5_0003317g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.4e-30 137.1 91 81.3
Nitab4.5_0004914g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 5.3e-30 135.2 91 78.0
Nitab4.5_0000419g0120 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.2e-29 134.0 84 81.0
Nitab4.5_0000040g0540 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.5e-29 133.7 129 65.1
Nitab4.5_0001101g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.0e-29 133.3 79 83.5
Nitab4.5_0000391g0380 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.0e-28 131.0 76 86.8
Nitab4.5_0004036g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.9e-28 129.4 98 76.5
Nitab4.5_0000263g0210 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.6e-26 123.6 84 73.8
Nitab4.5_0004591g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.4e-24 114.8 82 74.4
Nitab4.5_0005517g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.3e-23 114.0 70 80.0
Peaxi162Scf00658g00027 Petunia axillaris HOM05D003617 ORTHO05D007165 8.2e-23 111.3 185 40.0
Nitab4.5_0000423g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.8e-22 110.2 98 65.3
Nitab4.5_0001995g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.5e-21 105.5 95 55.8
CAN.G908.5 Capsicum annuum HOM05D003617 ORTHO05D010478 1.0e-20 104.4 105 55.2
CAN.G1323.7 Capsicum annuum HOM05D003617 ORTHO05D010478 3.8e-20 102.4 90 61.1
Nitab4.5_0007804g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.0e-20 102.1 58 87.9
CAN.G626.1 Capsicum annuum HOM05D003617 ORTHO05D010478 1.1e-19 100.9 90 58.9
CAN.G1445.3 Capsicum annuum HOM05D003617 ORTHO05D010478 1.4e-19 100.5 90 56.7
CAN.G626.3 Capsicum annuum HOM05D003617 ORTHO05D010478 2.5e-19 99.8 105 54.3
PGSC0003DMG400012065 Solanum tuberosum HOM05D003617 ORTHO05D010478 4.2e-19 99.0 90 58.9
PGSC0003DMG400044879 Solanum tuberosum HOM05D000995 ORTHO05D001773 7.2e-19 98.2 90 57.8
CAN.G1329.39 Capsicum annuum HOM05D003617 ORTHO05D010478 1.2e-18 97.4 105 52.4
Nitab4.5_0000045g0140 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.2e-18 97.4 84 63.1
CAN.G275.8 Capsicum annuum HOM05D003617 ORTHO05D010478 1.6e-18 97.1 90 56.7
PGSC0003DMG400045242 Solanum tuberosum HOM05D003617 ORTHO05D010478 1.6e-18 97.1 87 57.5
Sopen12g026610 Solanum pennellii HOM05D003617 ORTHO05D010478 2.1e-18 96.7 91 57.1
CAN.G108.23 Capsicum annuum HOM05D003617 ORTHO05D010478 3.6e-18 95.9 105 53.3
CAN.G135.3 Capsicum annuum HOM05D003617 ORTHO05D010478 4.6e-18 95.5 90 54.4
Nitab4.5_0000048g0120 Nicotiana tabacum HOM05D003617 ORTHO05D010478 6.1e-18 95.1 90 55.6
Nitab4.5_0004188g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.1e-18 95.1 277 28.5
PGSC0003DMG400042344 Solanum tuberosum HOM05D000995 ORTHO05D010478 6.1e-18 95.1 87 56.3
PGSC0003DMG400044625 Solanum tuberosum HOM05D003617 ORTHO05D010478 6.1e-18 95.1 90 55.6
Nitab4.5_0000481g0030 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.0e-17 94.4 118 44.9
Peaxi162Scf00148g00142 Petunia axillaris HOM05D003617 ORTHO05D007165 1.8e-17 93.6 180 37.8
CAN.G735.4 Capsicum annuum HOM05D003617 ORTHO05D010478 2.3e-17 93.2 105 52.4
Nitab4.5_0000095g0090 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.3e-17 93.2 120 43.3
Sopen11g010720 Solanum pennellii HOM05D003617 ORTHO05D007165 3.0e-17 92.8 89 55.1
CAN.G1658.3 Capsicum annuum HOM05D003617 ORTHO05D010478 3.9e-17 92.4 105 53.3
PGSC0003DMG400043386 Solanum tuberosum HOM05D003617 ORTHO05D010478 3.9e-17 92.4 91 53.8
Sopen05g021300 Solanum pennellii HOM05D000995 ORTHO05D012246 6.7e-17 91.7 90 54.4
Peaxi162Scf00466g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 8.8e-17 91.3 94 51.1
PGSC0003DMG400044334 Solanum tuberosum HOM05D003617 ORTHO05D010478 8.8e-17 91.3 92 52.2
PGSC0003DMG400046252 Solanum tuberosum HOM05D000995 ORTHO05D010478 2.0e-16 90.1 87 56.3
Sopen05g012010 Solanum pennellii HOM05D000002 ORTHO05D010478 2.5e-16 89.7 90 52.2
PGSC0003DMG400042314 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.5e-16 89.7 90 53.3
Nitab4.5_0000004g0300 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.8e-15 86.3 75 58.7
Nitab4.5_0003674g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.7e-15 85.9 93 49.5
CAN.G67.13 Capsicum annuum HOM05D003617 ORTHO05D010478 1.1e-14 84.3 90 52.2
Nitab4.5_0004591g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.1e-14 84.3 57 78.9
Nitab4.5_0002397g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.1e-14 82.4 73 56.2
Nitab4.5_0000416g0200 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.3e-14 82.0 98 54.1
Sopen01g028500 Solanum pennellii HOM05D003617 ORTHO05D000001 6.9e-14 81.6 81 54.3
CAN.G587.67 Capsicum annuum HOM05D003617 ORTHO05D010478 1.5e-13 80.5 76 52.6
PGSC0003DMG400003176 Solanum tuberosum HOM05D003617 ORTHO05D010478 2.0e-13 80.1 94 47.9
PGSC0003DMG400023003 Solanum tuberosum HOM05D000995 ORTHO05D000638 3.4e-13 79.3 62 66.1
PGSC0003DMG400034797 Solanum tuberosum HOM05D000995 ORTHO05D010478 5.9e-13 78.6 94 46.8
Nitab4.5_0001939g0070 Nicotiana tabacum HOM05D003617 ORTHO05D010478 7.7e-13 78.2 70 55.7
PGSC0003DMG400039284 Solanum tuberosum HOM05D003617 ORTHO05D010478 7.7e-13 78.2 90 51.1
Peaxi162Scf00963g00001 Petunia axillaris HOM05D003617 ORTHO05D007165 1.7e-12 77.0 71 52.1
Sopen02g010350 Solanum pennellii HOM05D003617 ORTHO05D010478 2.9e-12 76.3 88 50.0
Peaxi162Scf00104g00615 Petunia axillaris HOM05D003617 ORTHO05D007165 5.0e-12 75.5 76 47.4
PGSC0003DMG400015099 Solanum tuberosum HOM05D000995 ORTHO05D007165 5.0e-12 75.5 94 45.7
PGSC0003DMG400040544 Solanum tuberosum HOM05D003617 ORTHO05D007165 6.5e-12 75.1 68 55.9
Sopen06g006570 Solanum pennellii HOM05D000995 ORTHO05D002620 8.5e-12 74.7 97 44.3
Peaxi162Scf00883g00081 Petunia axillaris HOM05D003617 ORTHO05D007165 1.2e-10 70.9 96 42.7
Peaxi162Scf00991g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 1.2e-10 70.9 75 45.3
CAN.G755.17 Capsicum annuum HOM05D003617 ORTHO05D007165 2.7e-10 69.7 90 43.3
Nitab4.5_0000045g0130 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.7e-10 69.7 116 42.2
CAN.G108.56 Capsicum annuum HOM05D003617 ORTHO05D010478 4.7e-10 68.9 86 46.5
PGSC0003DMG400007485 Solanum tuberosum HOM05D000995 ORTHO05D001773 7.9e-10 68.2 85 45.9
PGSC0003DMG400037259 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.0e-09 67.8 87 46.0
PGSC0003DMG400036903 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.0e-09 66.2 89 44.9
CAN.G68.7 Capsicum annuum HOM05D003617 ORTHO05D010478 1.1e-08 64.3 94 42.6
CAN.G34.10 Capsicum annuum HOM05D003617 ORTHO05D010478 1.5e-08 63.9 143 32.9
Nitab4.5_0001081g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.3e-08 62.8 38 81.6
Nitab4.5_0006852g0060 Nicotiana tabacum HOM05D003617 ORTHO05D010478 5.7e-08 62.0 114 38.6
Peaxi162Scf00108g00186 Petunia axillaris HOM05D003617 ORTHO05D007165 9.7e-08 61.2 102 45.1
Nitab4.5_0000419g0110 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.2e-07 60.1 53 67.9
CAN.G370.37 Capsicum annuum HOM05D003617 ORTHO05D010478 2.8e-07 59.7 89 43.8
PGSC0003DMG400035166 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.8e-07 59.7 81 45.7
CAN.G1362.2 Capsicum annuum HOM05D003617 ORTHO05D010478 4.8e-07 58.9 90 42.2
Nitab4.5_0000095g0100 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.2e-07 58.2 95 43.2
Peaxi162Scf00190g00514 Petunia axillaris HOM05D003617 ORTHO05D007165 8.2e-07 58.2 137 29.9
PGSC0003DMG400046895 Solanum tuberosum HOM05D000995 ORTHO05D007165 8.2e-07 58.2 91 41.8
PGSC0003DMG400007445 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.1e-06 57.8 86 41.9
CAN.G1451.2 Capsicum annuum HOM05D003617 ORTHO05D007165 1.4e-06 57.4 72 47.2
Sopen07g015010 Solanum pennellii HOM05D000004 ORTHO05D000034 1.4e-06 57.4 94 38.3
Nitab4.5_0001976g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.8e-06 57.0 87 37.9
Nitab4.5_0002289g0150 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.8e-06 57.0 31 93.5
PGSC0003DMG400037839 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.8e-06 57.0 86 41.9
Nitab4.5_0018035g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.1e-06 56.2 91 38.5
Nitab4.5_0000481g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.1e-06 55.8 85 37.6
Nitab4.5_0000055g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.1e-06 54.7 34 73.5


User provided reference genes

Program Settings