Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008194g0080 Nicotiana tabacum HOM05D001372 ORTHO05D007311 8.4e-87 323.6 153 100.0
Peaxi162Scf00016g00132 Petunia axillaris HOM05D001372 ORTHO05D007311 3.6e-37 158.7 75 93.3
CAN.G322.87 Capsicum annuum HOM05D001372 ORTHO05D007311 1.0e-36 157.1 75 90.7
Solyc01g109070.2 Solanum lycopersicum HOM05D001372 ORTHO05D007311 5.2e-36 154.8 75 89.3
Sopen01g051270 Solanum pennellii HOM05D001372 ORTHO05D007311 5.2e-36 154.8 75 89.3
CAN.G134.164 Capsicum annuum HOM05D001372 ORTHO05D007311 1.5e-35 153.3 76 89.5
Nitab4.5_0004946g0010 Nicotiana tabacum HOM05D001372 ORTHO05D007311 4.4e-35 151.8 69 98.6
TPR.G10235 Trifolium pratense HOM05D001372 ORTHO05D007311 5.7e-35 151.4 77 87.0
vmacro02159 Vaccinium macrocarpon HOM05D001193 ORTHO05D007311 7.5e-35 151.0 79 86.1
ClCG02G005510 Citrullus lanatus HOM05D001372 ORTHO05D007311 1.3e-34 150.2 79 87.3
Medtr4g068370 Medicago truncatula HOM05D001372 ORTHO05D007311 1.3e-34 150.2 75 88.0
Medtr0311s0010 Medicago truncatula HOM05D001372 ORTHO05D007311 1.7e-34 149.8 75 86.7
Manes.15G145700 Manihot esculenta HOM05D001372 ORTHO05D007311 2.2e-34 149.4 80 83.8
Rhsim11G0170800 Rhododendron simsii HOM05D001193 ORTHO05D007311 2.2e-34 149.4 77 87.0
Lj3g0024398 Lotus japonicus HOM05D001372 ORTHO05D007311 3.7e-34 148.7 80 85.0
Lalb_Chr01g0002991 Lupinus albus HOM05D001372 ORTHO05D007311 3.7e-34 148.7 75 86.7
Sed0000118 Sechium edule HOM05D001372 ORTHO05D007311 4.9e-34 148.3 79 87.3
Hma1.2p1_0584F.1_g183260 Hydrangea macrophylla HOM05D001372 ORTHO05D007311 6.4e-34 147.9 75 84.0
Ca_20817_v3 Cicer arietinum L. HOM05D001372 ORTHO05D007311 8.3e-34 147.5 80 83.8
MELO3C018416.2 Cucumis melo HOM05D001372 ORTHO05D007311 8.3e-34 147.5 79 86.1
Hma1.2p1_1353F.1_g277710 Hydrangea macrophylla HOM05D001372 ORTHO05D007311 8.3e-34 147.5 79 83.5
Potri.009G109100 Populus trichocarpa HOM05D001372 ORTHO05D007311 8.3e-34 147.5 79 82.3
Nn2g15585 Nelumbo nucifera HOM05D001372 ORTHO05D007311 1.1e-33 147.1 79 83.5
Prupe.8G112600 Prunus persica HOM05D001372 ORTHO05D007311 1.1e-33 147.1 76 86.8
Cpa.g.sc62.81 Carica papaya HOM05D001372 ORTHO05D007311 1.4e-33 146.7 73 86.3
CsaV3_7G010120 Cucumis sativus L. HOM05D001372 ORTHO05D007311 1.8e-33 146.4 79 86.1
Dinv28822 Davidia involucrata HOM05D001372 ORTHO05D007311 1.8e-33 146.4 79 83.5
SalBow5G1173 Salvia bowleyana HOM05D001372 ORTHO05D007311 1.8e-33 146.4 74 89.2
CSS0001418 Camellia sinensis var. sinensis HOM05D001372 ORTHO05D007311 3.2e-33 145.6 75 85.3
CSS0020019 Camellia sinensis var. sinensis HOM05D001372 ORTHO05D007311 3.2e-33 145.6 75 85.3
SalBow3G1216 Salvia bowleyana HOM05D001372 ORTHO05D007311 3.2e-33 145.6 74 89.2
TWI38G1937 Tripterygium wilfordii HOM05D001372 ORTHO05D007311 3.2e-33 145.6 76 84.2
DCAR_022076 Daucus carota HOM05D001372 ORTHO05D007311 4.1e-33 145.2 77 84.4
Glyma.11G123600 Glycine max HOM05D001372 ORTHO05D007311 4.1e-33 145.2 80 82.5
Lsat_1_v5_gn_9_109081 Lactuca sativa HOM05D001372 ORTHO05D007311 5.4e-33 144.8 76 85.5
Psat1g039160 Pisum sativum HOM05D001372 ORTHO05D007311 5.4e-33 144.8 80 82.5
AL3G47750 Arabidopsis lyrata HOM05D001372 ORTHO05D002010 7.0e-33 144.4 75 84.0
Ciclev10030268m.g Citrus clementina HOM05D001372 ORTHO05D007311 7.0e-33 144.4 85 75.3
TWI38G0580 Tripterygium wilfordii HOM05D001372 ORTHO05D007311 7.0e-33 144.4 76 84.2
Manes.17G096600 Manihot esculenta HOM05D001372 ORTHO05D007311 1.2e-32 143.7 80 80.0
BcaB03g16342 Brassica carinata HOM05D001372 ORTHO05D007311 1.6e-32 143.3 75 82.7
Carub.0003s2981 Capsella rubella HOM05D001372 ORTHO05D007311 1.6e-32 143.3 75 82.7
MD10G1086600 Malus domestica HOM05D001372 ORTHO05D007311 1.6e-32 143.3 76 85.5
Glyma.12G048200 Glycine max HOM05D001372 ORTHO05D007311 2.0e-32 142.9 80 81.2
AT2G15910 Arabidopsis thaliana HOM05D001372 ORTHO05D002010 2.7e-32 142.5 72 86.1
CARHR106260 Cardamine hirsuta HOM05D001372 ORTHO05D007311 2.7e-32 142.5 72 86.1
Oeu010568.1 Olea europaea HOM05D001372 ORTHO05D007311 2.7e-32 142.5 77 81.8
THA.LOC104807341 Tarenaya hassleriana HOM05D001372 ORTHO05D007311 2.7e-32 142.5 72 86.1
Cfa004947 Carpinus fangiana HOM05D001372 ORTHO05D007311 3.5e-32 142.1 79 78.5
Haze_02462 Corylus avellana HOM05D001372 ORTHO05D007311 3.5e-32 142.1 79 78.5
FAN26G1996 Fragaria x ananassa HOM05D001372 ORTHO05D007311 3.5e-32 142.1 77 85.7
HanXRQChr03g0074331 Helianthus annuus HOM05D001372 ORTHO05D007311 3.5e-32 142.1 76 84.2
Nn7g36402 Nelumbo nucifera HOM05D001372 ORTHO05D007311 3.5e-32 142.1 79 82.3
Aqoxy230s002 Aquilegia oxysepala HOM05D001372 ORTHO05D007311 4.6e-32 141.7 71 85.9
Aqoxy4G03213 Aquilegia oxysepala HOM05D001372 ORTHO05D007311 4.6e-32 141.7 71 85.9
CANSAT80G1477 Cannabis sativa HOM05D001372 ORTHO05D007311 4.6e-32 141.7 78 82.1
Sp3g29230 Schrenkiella parvula HOM05D001372 ORTHO05D007311 4.6e-32 141.7 75 82.7
THA.LOC104819597 Tarenaya hassleriana HOM05D001372 ORTHO05D007311 4.6e-32 141.7 72 87.5
Aqoxy6G00480 Aquilegia oxysepala HOM05D001372 ORTHO05D007311 5.9e-32 141.4 71 87.3
A07p04870 Brassica napus HOM05D001372 ORTHO05D007311 5.9e-32 141.4 75 81.3
BraA07t28279Z Brassica rapa HOM05D001372 ORTHO05D007311 5.9e-32 141.4 75 81.3
CiPaw.05G058700 Carya illinoinensis HOM05D001372 ORTHO05D007311 5.9e-32 141.4 78 76.9
Haze_02464 Corylus avellana HOM05D001372 ORTHO05D007311 7.8e-32 141.0 79 78.5
Migut.N01213 Erythranthe guttata HOM05D001372 ORTHO05D007311 7.8e-32 141.0 74 83.8
Phvul.011G050400 Phaseolus vulgaris HOM05D001372 ORTHO05D007311 7.8e-32 141.0 80 77.5
Psat5g239440 Pisum sativum HOM05D001372 ORTHO05D007311 1.0e-31 140.6 69 88.4
Psat5g295360 Pisum sativum HOM05D001372 ORTHO05D007311 1.0e-31 140.6 69 88.4
RcHm_v2.0_Chr6g0260171 Rosa chinensis HOM05D001372 ORTHO05D007311 1.3e-31 140.2 77 84.4
RcHm_v2.0_Chr6g0260511 Rosa chinensis HOM05D001372 ORTHO05D007311 1.3e-31 140.2 77 84.4
RcHm_v2.0_Chr6g0260771 Rosa chinensis HOM05D001372 ORTHO05D007311 1.3e-31 140.2 75 84.0
BcaC06g36100 Brassica carinata HOM05D001372 ORTHO05D007311 1.7e-31 139.8 71 85.9
C07p07850 Brassica napus HOM05D001372 ORTHO05D007311 1.7e-31 139.8 71 85.9
BolC7t41203H Brassica oleracea HOM05D001372 ORTHO05D007311 1.7e-31 139.8 71 85.9
Eucgr.F03329 Eucalyptus grandis HOM05D001372 ORTHO05D007311 1.7e-31 139.8 76 82.9
Sabra09G0083300 Salix brachista HOM05D001372 ORTHO05D007311 2.3e-31 139.4 79 78.5
Thecc.02G028600 Theobroma cacao HOM05D001372 ORTHO05D007311 3.0e-31 139.0 76 81.6
Duzib052G0457 Durio zibethinus HOM05D001372 ORTHO05D007311 3.9e-31 138.7 76 81.6
QL11p039238 Quercus lobata HOM05D001372 ORTHO05D007311 3.9e-31 138.7 67 88.1
Aa31LG8G13440 Aethionema arabicum HOM05D001372 ORTHO05D007311 5.0e-31 138.3 71 84.5
BcaC01g03046 Brassica carinata HOM05D001372 ORTHO05D007311 5.0e-31 138.3 68 88.2
A03p45650 Brassica napus HOM05D001372 ORTHO05D002010 5.0e-31 138.3 68 88.2
C03p56710 Brassica napus HOM05D001372 ORTHO05D002010 5.0e-31 138.3 68 88.2
BolC3t17955H Brassica oleracea HOM05D001372 ORTHO05D002010 5.0e-31 138.3 68 88.2
BraA03t13697Z Brassica rapa HOM05D001372 ORTHO05D002010 5.0e-31 138.3 68 88.2
FAN19G1239 Fragaria x ananassa HOM05D001372 ORTHO05D007311 5.0e-31 138.3 77 81.8
Oeu003708.1 Olea europaea HOM05D001372 ORTHO05D007311 5.0e-31 138.3 97 68.0
EL10Ac5g10871 Beta vulgaris HOM05D001372 ORTHO05D007311 6.6e-31 137.9 76 77.6
Cc02_g18240 Coffea canephora HOM05D001372 ORTHO05D007311 6.6e-31 137.9 77 79.2
Thhalv10023083m.g Eutrema salsugineum HOM05D001372 ORTHO05D002010 8.6e-31 137.5 68 88.2
RcHm_v2.0_Chr6g0260501 Rosa chinensis HOM05D001372 ORTHO05D007311 8.6e-31 137.5 77 83.1
CSS0021822 Camellia sinensis var. sinensis HOM05D001372 ORTHO05D007311 1.5e-30 136.7 77 80.5
Duzib132G0052 Durio zibethinus HOM05D001372 ORTHO05D007311 1.5e-30 136.7 76 80.3
Eucgr.G00508 Eucalyptus grandis HOM05D001372 ORTHO05D007311 1.5e-30 136.7 76 78.9
FAN28G0653 Fragaria x ananassa HOM05D001372 ORTHO05D007311 1.5e-30 136.7 77 81.8
FAN28G0897 Fragaria x ananassa HOM05D001372 ORTHO05D007311 1.5e-30 136.7 77 81.8
Eucgr.G01534 Eucalyptus grandis HOM05D001372 ORTHO05D007311 1.9e-30 136.3 76 78.9
Atru.chr13.1402 Acer truncatum HOM05D001372 ORTHO05D007311 2.5e-30 136.0 76 80.3
arahy.Tifrunner.gnm1.ann1.FTA1AJ Arachis hypogaea HOM05D001372 ORTHO05D007311 2.5e-30 136.0 75 81.3
BcaB08g34618 Brassica carinata HOM05D001372 ORTHO05D007311 2.5e-30 136.0 74 79.7
COL.COLO4_17203 Corchorus olitorius HOM05D001372 ORTHO05D007311 2.5e-30 136.0 76 78.9
PGR042G3549 Punica granatum HOM05D001372 ORTHO05D007311 4.3e-30 135.2 75 80.0
arahy.Tifrunner.gnm1.ann1.34YEZP Arachis hypogaea HOM05D001372 ORTHO05D007311 5.6e-30 134.8 72 83.3
Gohir.D12G042200 Gossypium hirsutum HOM05D001372 ORTHO05D007311 5.6e-30 134.8 76 78.9
Gorai.008G044200 Gossypium raimondii HOM05D001372 ORTHO05D007311 5.6e-30 134.8 76 78.9
Ah.02g112890 Amaranthus hybridus HOM05D001372 ORTHO05D007311 7.3e-30 134.4 77 79.2
Ah.02g112920 Amaranthus hybridus HOM05D001372 ORTHO05D007311 7.3e-30 134.4 77 79.2
COL.COLO4_17775 Corchorus olitorius HOM05D001372 ORTHO05D007311 7.3e-30 134.4 76 78.9
Sc14g0001710 Simmondsia chinensis HOM05D001372 ORTHO05D007311 7.3e-30 134.4 77 76.6
Psat2g085760 Pisum sativum HOM05D001372 ORTHO05D007311 9.5e-30 134.0 80 77.5
unitig_60.g25449 Utricularia gibba HOM05D001372 ORTHO05D007311 9.5e-30 134.0 62 93.5
AUR62021787 Chenopodium quinoa HOM05D001372 ORTHO05D007311 1.2e-29 133.7 75 77.3
Gohir.A12G030200 Gossypium hirsutum HOM05D001372 ORTHO05D007311 1.2e-29 133.7 76 77.6
AUR62008308 Chenopodium quinoa HOM05D001372 ORTHO05D007311 1.6e-29 133.3 75 76.0
AUR62008309 Chenopodium quinoa HOM05D001372 ORTHO05D007311 1.6e-29 133.3 75 76.0
AUR62025645 Chenopodium quinoa HOM05D001372 ORTHO05D007311 2.8e-29 132.5 75 76.0
CDE07G0396 Ceratophyllum demersum HOM05D001372 ORTHO05D007311 3.6e-29 132.1 78 74.4
Gohir.A09G221800 Gossypium hirsutum HOM05D001372 ORTHO05D007311 4.7e-29 131.7 76 77.6
CDE09G1189 Ceratophyllum demersum HOM05D001455 ORTHO05D001587 6.2e-29 131.3 97 62.9
Ah.11g045560 Amaranthus hybridus HOM05D001372 ORTHO05D007311 2.3e-28 129.4 77 75.3
HPP92_025391 Vanilla planifolia HOM05D001372 ORTHO05D007311 2.3e-28 129.4 62 90.3
Pp3c17_11290 Physcomitrium patens HOM05D001372 ORTHO05D007311 3.1e-28 129.0 65 84.6
ATR0807G173 Amborella trichopoda HOM05D001372 ORTHO05D007311 5.2e-28 128.3 63 84.1
Atru.chr5.2877 Acer truncatum HOM05D001372 ORTHO05D007311 4.4e-27 125.2 76 73.7
AagrBONN_evm.TU.Sc2ySwM_344.4003 Anthoceros agrestis HOM05D001372 ORTHO05D007311 2.2e-26 122.9 65 81.5
Gorai.006G245400 Gossypium raimondii HOM05D001372 ORTHO05D007311 4.9e-26 121.7 76 73.7
Mapoly0002s0208 Marchantia polymorpha HOM05D001372 ORTHO05D007311 8.3e-26 120.9 68 76.5
Zm00001eb389160 Zea mays HOM05D001372 ORTHO05D007311 8.3e-26 120.9 72 69.4
Cre16.g653850 Chlamydomonas reinhardtii HOM05D001372 ORTHO05D007311 7.0e-25 117.9 62 80.6
Lsat_1_v5_gn_2_32760 Lactuca sativa HOM05D001372 ORTHO05D007311 7.0e-25 117.9 68 76.5
Os06g0661600 Oryza sativa ssp. japonica HOM05D001372 ORTHO05D007311 9.2e-25 117.5 67 76.1
SHI05448 Sapria himalayana HOM05D001372 ORTHO05D007311 2.0e-24 116.3 55 87.3
arahy.Tifrunner.gnm1.ann1.YI8NBA Arachis hypogaea HOM05D018927 ORTHO05D003639 3.5e-24 115.5 63 79.4
Gohir.A04G115800 Gossypium hirsutum HOM05D001372 ORTHO05D007311 4.6e-24 115.2 66 75.8
SMO111G0193 Selaginella moellendorffii HOM05D001372 ORTHO05D007311 4.6e-24 115.2 58 84.5
Nitab4.5_0001401g0190 Nicotiana tabacum HOM05D001372 ORTHO05D007311 7.8e-24 114.4 51 98.0
Zm00001eb274880 Zea mays HOM05D001372 ORTHO05D007311 1.6e-21 106.7 54 81.5
HanXRQChr07g0193971 Helianthus annuus HOM05D001372 ORTHO05D007311 2.8e-21 105.9 54 79.6
MCO08G009 Micromonas commoda HOM05D001372 ORTHO05D007311 6.8e-20 101.3 62 62.9
RcHm_v2.0_Chr6g0259971 Rosa chinensis HOM05D001372 ORTHO05D007311 1.7e-18 96.7 55 81.8
Cc02_g18230 Coffea canephora HOM05D001372 ORTHO05D007311 3.0e-15 85.9 45 80.0
PRCOL_00006747 Prasinoderma coloniale HOM05D001372 ORTHO05D007311 5.1e-15 85.1 59 57.6


User provided reference genes

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