Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008184g0020 Nicotiana tabacum HOM05D007242 ORTHO05D009089 9.6e-242 839.7 420 100.0
CAN.G1204.3 Capsicum annuum HOM05D007242 ORTHO05D009089 5.2e-147 525.0 337 79.8
Nitab4.5_0010783g0030 Nicotiana tabacum HOM05D007242 ORTHO05D009089 4.6e-135 485.3 287 88.5
Peaxi162Scf00075g00618 Petunia axillaris HOM05D007242 ORTHO05D009089 1.6e-127 460.3 291 81.4
Sopen01g004000 Solanum pennellii HOM05D007242 ORTHO05D009089 5.6e-125 451.8 286 81.1
Solyc01g008480.4 Solanum lycopersicum HOM05D007242 ORTHO05D009089 1.5e-122 443.7 286 79.4
Peaxi162Scf00075g00617 Petunia axillaris HOM05D007242 ORTHO05D009089 2.2e-121 439.9 288 79.5
Lj2A917T62 Lonicera japonica HOM05D007242 ORTHO05D009089 6.3e-84 315.5 313 52.1
Lj2C896T5 Lonicera japonica HOM05D007242 ORTHO05D009089 1.8e-83 313.9 313 52.1
GSVIVG01019029001 Vitis vinifera HOM05D007242 ORTHO05D009089 5.3e-83 312.4 330 51.8
Sabra05G0104300 Salix brachista HOM05D007242 ORTHO05D009089 1.2e-79 301.2 305 52.8
Oeu038867.1 Olea europaea HOM05D007242 ORTHO05D009089 6.8e-78 295.4 309 50.5
Ciclev10027297m.g Citrus clementina HOM05D007242 ORTHO05D009089 4.4e-77 292.7 310 50.0
Atru.chr3.510 Acer truncatum HOM05D007242 ORTHO05D009089 1.6e-71 274.2 295 49.2
CSS0024550 Camellia sinensis var. sinensis HOM05D007242 ORTHO05D009089 1.2e-69 268.1 281 49.8
Dinv26797 Davidia involucrata HOM05D007242 ORTHO05D009089 9.2e-67 258.5 284 50.7
Hma1.2p1_0939F.1_g239400 Hydrangea macrophylla HOM05D007242 ORTHO05D009089 9.2e-67 258.5 291 47.8
Rhsim08G0035000 Rhododendron simsii HOM05D007242 ORTHO05D009089 7.8e-66 255.4 275 50.2
Migut.H00525 Erythranthe guttata HOM05D007242 ORTHO05D009089 1.7e-65 254.2 272 50.4
MSTRG.2935 Avicennia marina HOM05D007242 ORTHO05D009089 3.8e-65 253.1 291 48.1
Potri.005G127500 Populus trichocarpa HOM05D007242 ORTHO05D009089 2.5e-64 250.4 274 49.6
Cc07_g05120 Coffea canephora HOM05D007242 ORTHO05D009089 3.3e-64 250.0 282 47.9
SGA_v2.0_scaffold204G41644 Striga asiatica HOM05D007242 ORTHO05D009089 4.3e-64 249.6 299 45.5
Psat4g001600 Pisum sativum HOM05D007242 ORTHO05D009089 5.6e-64 249.2 316 42.4
Thecc.01G042000 Theobroma cacao HOM05D007242 ORTHO05D009089 5.6e-64 249.2 272 48.5
COL.COLO4_04840 Corchorus olitorius HOM05D007242 ORTHO05D009089 7.3e-64 248.8 317 42.9
MD15G1269300 Malus domestica HOM05D007242 ORTHO05D009089 9.5e-64 248.4 289 47.1
Glyma.05G246000 Glycine max HOM05D007242 ORTHO05D009089 2.8e-63 246.9 294 48.3
TPR.G15492 Trifolium pratense HOM05D007242 ORTHO05D009089 2.8e-63 246.9 300 44.7
Haze_18840 Corylus avellana HOM05D007242 ORTHO05D009089 4.7e-63 246.1 281 49.1
Hma1.2p1_0268F.1_g107710 Hydrangea macrophylla HOM05D007242 ORTHO05D009089 1.8e-62 244.2 284 47.2
SalBow1G2223 Salvia bowleyana HOM05D007242 ORTHO05D009089 1.8e-62 244.2 250 51.2
Duzib264G0124 Durio zibethinus HOM05D007242 ORTHO05D009089 4.0e-62 243.0 276 46.4
Medtr8g107230 Medicago truncatula HOM05D007242 ORTHO05D009089 5.2e-62 242.7 301 45.2
A06p37220 Brassica napus HOM05D007242 ORTHO05D009089 6.8e-62 242.3 307 45.0
Prupe.7G148400 Prunus persica HOM05D007242 ORTHO05D009089 6.8e-62 242.3 279 48.0
QL12p024714 Quercus lobata HOM05D007242 ORTHO05D009089 8.9e-62 241.9 283 47.3
CARHR143900 Cardamine hirsuta HOM05D007242 ORTHO05D009089 2.6e-61 240.4 296 44.9
Gorai.007G051500 Gossypium raimondii HOM05D007242 ORTHO05D009089 2.9e-60 236.9 270 48.5
Manes.13G136000 Manihot esculenta HOM05D007242 ORTHO05D009089 4.9e-60 236.1 295 45.4
VMungo0251G2211 Vigna mungo HOM05D007242 ORTHO05D009089 6.4e-60 235.7 296 45.6
HanXRQChr07g0193491 Helianthus annuus HOM05D007242 ORTHO05D009089 4.1e-59 233.0 323 43.7
BcaC06g34194 Brassica carinata HOM05D007242 ORTHO05D009089 9.2e-59 231.9 291 46.7
arahy.Tifrunner.gnm1.ann1.YZC3AP Arachis hypogaea HOM05D007242 ORTHO05D009089 2.7e-58 230.3 288 45.8
CiPaw.15G142800 Carya illinoinensis HOM05D007242 ORTHO05D009089 2.7e-58 230.3 288 46.2
Gohir.A11G044400 Gossypium hirsutum HOM05D007242 ORTHO05D009089 2.7e-58 230.3 270 48.1
THA.LOC104819810 Tarenaya hassleriana HOM05D007242 ORTHO05D009089 2.7e-58 230.3 277 46.2
Carub.0005s0035 Capsella rubella HOM05D007242 ORTHO05D009089 3.5e-58 229.9 300 43.7
Eucgr.B03084 Eucalyptus grandis HOM05D007242 ORTHO05D009089 5.0e-57 226.1 286 45.8
vmacro23494 Vaccinium macrocarpon HOM05D007242 ORTHO05D009089 5.0e-57 226.1 264 48.9
BcaC06g31314 Brassica carinata HOM05D007242 ORTHO05D009089 8.6e-57 225.3 290 46.2
A06p44470 Brassica napus HOM05D007242 ORTHO05D009089 8.6e-57 225.3 288 46.2
C07p31760 Brassica napus HOM05D007242 ORTHO05D009089 8.6e-57 225.3 289 46.4
BolC7t43717H Brassica oleracea HOM05D007242 ORTHO05D009089 8.6e-57 225.3 289 46.4
BraA06t27320Z Brassica rapa HOM05D007242 ORTHO05D009089 8.6e-57 225.3 288 46.2
ClCG02G013250 Citrullus lanatus HOM05D007242 ORTHO05D009089 8.6e-57 225.3 282 42.2
TAR381G0682 Trochodendron aralioides HOM05D007242 ORTHO05D009089 1.5e-56 224.6 275 45.1
Thhalv10000833m.g Eutrema salsugineum HOM05D007242 ORTHO05D009089 2.5e-56 223.8 287 44.6
TWI53G0783 Tripterygium wilfordii HOM05D007242 ORTHO05D009089 2.5e-56 223.8 264 47.0
CANSAT35G0651 Cannabis sativa HOM05D007242 ORTHO05D009089 3.3e-56 223.4 283 46.3
Sp2g12820 Schrenkiella parvula HOM05D007242 ORTHO05D009089 4.3e-56 223.0 287 44.9
DCAR_026265 Daucus carota HOM05D007242 ORTHO05D009089 5.6e-56 222.6 261 47.9
Aa31LG2G8550 Aethionema arabicum HOM05D007242 ORTHO05D009089 7.3e-56 222.2 290 44.8
AL5G10350 Arabidopsis lyrata HOM05D007242 ORTHO05D009089 2.1e-55 220.7 288 44.8
BraA06t26646Z Brassica rapa HOM05D007242 ORTHO05D009089 4.7e-55 219.5 307 43.0
Lalb_Chr05g0221691 Lupinus albus HOM05D007242 ORTHO05D009089 4.7e-55 219.5 281 42.0
Phvul.002G329700 Phaseolus vulgaris HOM05D007242 ORTHO05D009089 6.2e-55 219.2 290 45.5
PGR102G1679 Punica granatum HOM05D007242 ORTHO05D009089 8.0e-55 218.8 278 45.3
AT2G01390 Arabidopsis thaliana HOM05D007242 ORTHO05D009089 2.3e-54 217.2 292 43.5
arahy.Tifrunner.gnm1.ann1.79NCEV Arachis hypogaea HOM05D007242 ORTHO05D009089 4.0e-54 216.5 280 44.6
CsaV3_2G017430 Cucumis sativus L. HOM05D007242 ORTHO05D009089 3.4e-53 213.4 288 40.3
Aqoxy6G01016 Aquilegia oxysepala HOM05D007242 ORTHO05D009089 5.8e-53 212.6 276 40.9
MELO3C020940.2 Cucumis melo HOM05D007242 ORTHO05D009089 9.8e-53 211.8 288 39.2
Sed0022143 Sechium edule HOM05D007242 ORTHO05D009089 9.8e-53 211.8 280 40.7
HanXRQChr14g0431951 Helianthus annuus HOM05D007242 ORTHO05D009089 3.2e-51 206.8 264 43.2
Hund14133 Selenicereus undatus HOM05D007242 ORTHO05D009089 2.7e-50 203.8 266 42.1
ECA246G4655 Erigeron canadensis HOM05D007242 ORTHO05D009089 1.9e-48 197.6 271 42.1
MBI16_g13145_MAGBIO Magnolia biondii HOM05D007242 ORTHO05D009089 1.4e-46 191.4 250 41.6
Lsat_1_v5_gn_2_38041 Lactuca sativa HOM05D007242 ORTHO05D009089 2.3e-46 190.7 251 41.8
vmacro22084 Vaccinium macrocarpon HOM05D007242 ORTHO05D009089 3.4e-45 186.8 289 40.5
Nn1g05103 Nelumbo nucifera HOM05D007242 ORTHO05D009089 5.8e-45 186.0 269 38.7
AUR62003202 Chenopodium quinoa HOM05D007242 ORTHO05D009089 1.7e-44 184.5 308 37.0
HPP92_006079 Vanilla planifolia HOM05D007242 ORTHO05D009089 3.5e-42 176.8 220 41.8
Glyma.08G053933 Glycine max HOM05D007242 ORTHO05D009089 7.8e-42 175.6 225 43.1
AUR62008019 Chenopodium quinoa HOM05D007242 ORTHO05D009089 1.3e-41 174.9 287 35.9
EL10Ac6g14891 Beta vulgaris HOM05D007242 ORTHO05D009089 1.7e-41 174.5 257 38.5
MD02G1154900 Malus domestica HOM05D007242 ORTHO05D009089 7.3e-40 169.1 243 41.6
Os10g0358700 Oryza sativa ssp. japonica HOM05D007242 ORTHO05D009089 2.4e-35 154.1 285 34.7
Zm00001eb288630 Zea mays HOM05D007242 ORTHO05D009089 3.2e-35 153.7 260 35.0
ATR0767G228 Amborella trichopoda HOM05D007242 ORTHO05D009089 2.5e-32 144.1 275 34.5
AT2G01360 Arabidopsis thaliana HOM05D007242 ORTHO05D009089 1.8e-22 111.3 159 39.6
Atru.chr3.508 Acer truncatum HOM05D007242 ORTHO05D009089 1.5e-21 108.2 88 62.5
Gohir.D11G047900 Gossypium hirsutum HOM05D007242 ORTHO05D009089 2.4e-19 100.9 125 48.0
Lj4C132T2 Lonicera japonica HOM05D007242 ORTHO05D009089 3.2e-19 100.5 93 53.8
Atru.chr3.509 Acer truncatum HOM05D007242 ORTHO05D009089 1.0e-17 95.5 69 65.2
BcaB08g34298 Brassica carinata HOM05D007242 ORTHO05D009089 4.5e-13 80.1 102 43.1
EL10Ac4g08697 Beta vulgaris HOM05D007242 ORTHO05D009089 5.5e-11 73.2 134 32.8
CSS0006147 Camellia sinensis var. sinensis HOM05D007242 ORTHO05D009089 1.2e-10 72.0 167 31.7
BcaC06g34182 Brassica carinata HOM05D007242 ORTHO05D009089 6.0e-10 69.7 83 43.4
BcaC06g34191 Brassica carinata HOM05D007242 ORTHO05D009089 1.9e-08 64.7 61 49.2
PGR044G1733 Punica granatum HOM05D003056 ORTHO05D003422 3.1e-06 57.4 169 30.8


User provided reference genes

Program Settings