Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008182g0060 Nicotiana tabacum HOM05D005752 ORTHO05D006959 1.3e-103 379.8 194 100.0
Nitab4.5_0009307g0030 Nicotiana tabacum HOM05D005752 ORTHO05D006959 3.3e-96 355.1 194 93.8
Nitab4.5_0005315g0030 Nicotiana tabacum HOM05D005752 ORTHO05D006959 3.3e-72 275.4 193 77.2
CAN.G65.61 Capsicum annuum HOM05D005752 ORTHO05D006959 1.8e-65 253.1 213 65.7
PGSC0003DMG400015277 Solanum tuberosum HOM05D005752 ORTHO05D006959 1.8e-65 253.1 214 69.6
Ciclev10024397m.g Citrus clementina HOM05D005752 ORTHO05D006959 8.3e-63 244.2 222 61.3
Eucgr.H00664 Eucalyptus grandis HOM05D005752 ORTHO05D006959 7.0e-62 241.1 205 65.4
CSS0040154 Camellia sinensis var. sinensis HOM05D005752 ORTHO05D006959 1.6e-61 240.0 206 65.5
Migut.O00287 Erythranthe guttata HOM05D005752 ORTHO05D006959 3.5e-61 238.8 202 65.3
TAR636G2449 Trochodendron aralioides HOM05D005752 ORTHO05D006959 7.7e-61 237.7 204 62.3
Nitab4.5_0000477g0100 Nicotiana tabacum HOM05D005752 ORTHO05D006959 1.0e-60 237.3 197 68.5
Oeu038392.3 Olea europaea HOM05D005752 ORTHO05D006959 1.7e-60 236.5 205 63.9
Atru.chr9.27 Acer truncatum HOM05D005752 ORTHO05D006959 2.2e-60 236.1 204 64.7
Actinidia06837 Actinidia chinensis HOM05D005752 ORTHO05D006959 5.0e-60 235.0 204 64.2
TAR472G0004 Trochodendron aralioides HOM05D005752 ORTHO05D006959 6.5e-60 234.6 204 62.7
ATR0124G026 Amborella trichopoda HOM05D005752 ORTHO05D006959 8.5e-60 234.2 209 61.7
Aqoxy3G04339 Aquilegia oxysepala HOM05D005752 ORTHO05D006959 8.5e-60 234.2 204 62.3
Gohir.A07G062900 Gossypium hirsutum HOM05D005752 ORTHO05D006959 8.5e-60 234.2 204 63.7
CiPaw.15G108100 Carya illinoinensis HOM05D005752 ORTHO05D006959 1.1e-59 233.8 216 61.6
Duzib205G1872 Durio zibethinus HOM05D005752 ORTHO05D006959 2.5e-59 232.6 205 62.9
TWI81G0144 Tripterygium wilfordii HOM05D005752 ORTHO05D006959 4.2e-59 231.9 231 58.0
FvH4_5g27080 Fragaria vesca HOM05D005752 ORTHO05D006959 5.5e-59 231.5 207 63.3
Manes.15G187700 Manihot esculenta HOM05D005752 ORTHO05D006959 1.2e-58 230.3 208 63.5
THA.LOC104812187 Tarenaya hassleriana HOM05D005752 ORTHO05D006959 1.2e-58 230.3 219 60.7
CANSAT80G0630 Cannabis sativa HOM05D005752 ORTHO05D006959 3.6e-58 228.8 205 62.4
ECA232G1540 Erigeron canadensis HOM05D005752 ORTHO05D006959 3.6e-58 228.8 204 63.7
Gohir.D07G067500 Gossypium hirsutum HOM05D005752 ORTHO05D006959 2.3e-57 226.1 200 62.5
Sed0024837 Sechium edule HOM05D005752 ORTHO05D006959 4.0e-57 225.3 206 64.1
Lsat_1_v5_gn_6_23301 Lactuca sativa HOM05D005752 ORTHO05D006959 5.2e-57 224.9 194 64.9
Potri.004G066700 Populus trichocarpa HOM05D005752 ORTHO05D006959 5.2e-57 224.9 212 64.6
PGR083G1308 Punica granatum HOM05D005752 ORTHO05D006959 5.2e-57 224.9 205 62.0
Gorai.001G071100 Gossypium raimondii HOM05D005752 ORTHO05D006959 3.4e-56 222.2 200 62.5
Carub.0002s2009 Capsella rubella HOM05D005752 ORTHO05D006959 7.5e-56 221.1 220 59.5
AT1G73350 Arabidopsis thaliana HOM05D005752 ORTHO05D006959 1.7e-55 219.9 214 59.3
PSO063G6484 Papaver somniferum HOM05D005752 ORTHO05D006959 1.7e-55 219.9 204 58.3
PSO782G4127 Papaver somniferum HOM05D005752 ORTHO05D006959 4.9e-55 218.4 205 59.5
BcaB03g15707 Brassica carinata HOM05D005752 ORTHO05D006959 1.1e-54 217.2 219 60.3
Sc10g0008680 Simmondsia chinensis HOM05D005752 ORTHO05D006959 1.1e-54 217.2 207 59.4
DCAR_023237 Daucus carota HOM05D005752 ORTHO05D006959 4.1e-54 215.3 219 56.2
unitig_0.g1238 Utricularia gibba HOM05D000376 ORTHO05D000237 2.0e-53 213.0 190 63.7
Prupe.1G588300 Prunus persica HOM05D005752 ORTHO05D006959 3.5e-53 212.2 206 60.2
Sp5g28280 Schrenkiella parvula HOM05D005752 ORTHO05D006959 1.7e-52 209.9 230 54.8
BraA07t30622Z Brassica rapa HOM05D005752 ORTHO05D006959 2.9e-52 209.1 223 56.5
BcaB03g15052 Brassica carinata HOM05D005752 ORTHO05D006959 3.8e-52 208.8 219 56.2
Glyma.16G210400 Glycine max HOM05D005752 ORTHO05D006959 3.8e-52 208.8 137 78.1
Glyma.09G161000 Glycine max HOM05D005752 ORTHO05D006959 6.6e-52 208.0 210 57.6
Lj2g0008613 Lotus japonicus HOM05D005752 ORTHO05D006959 6.6e-52 208.0 137 77.4
VMungo0464G0712 Vigna mungo HOM05D005752 ORTHO05D006959 8.6e-52 207.6 191 60.7
Zm00001eb185640 Zea mays HOM05D005752 ORTHO05D006959 1.5e-51 206.8 210 58.6
EL10Ac8g19469 Beta vulgaris HOM05D005752 ORTHO05D006959 1.9e-51 206.5 228 54.8
CAN.G861.19 Capsicum annuum HOM05D005752 ORTHO05D006959 1.9e-51 206.5 197 61.4
Thhalv10019162m.g Eutrema salsugineum HOM05D005752 ORTHO05D006959 2.5e-51 206.1 208 58.2
Lj5C168T8 Lonicera japonica HOM05D005752 ORTHO05D006959 3.3e-51 205.7 193 60.6
Os02g0637900 Oryza sativa ssp. japonica HOM05D005752 ORTHO05D006959 3.6e-50 202.2 184 62.5
BraA07t31481Z Brassica rapa HOM05D005752 ORTHO05D006959 4.7e-50 201.8 220 56.4
arahy.Tifrunner.gnm1.ann1.CL4QH0 Arachis hypogaea HOM05D005752 ORTHO05D006959 2.3e-49 199.5 175 62.9
SEGI_37918 Sequoiadendron giganteum HOM05D005752 ORTHO05D006959 1.2e-48 197.2 217 54.4
CDE08G1652 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 3.4e-48 195.7 179 61.5
Hund06741 Selenicereus undatus HOM05D005752 ORTHO05D006959 9.8e-48 194.1 209 56.0
arahy.Tifrunner.gnm1.ann1.LY2Y4A Arachis hypogaea HOM05D005752 ORTHO05D006959 1.3e-47 193.7 265 48.7
A07p39320 Brassica napus HOM05D005752 ORTHO05D006959 2.2e-47 193.0 223 52.5
A07p29840 Brassica napus HOM05D005752 ORTHO05D006959 3.7e-47 192.2 259 48.6
Cfa017810 Carpinus fangiana HOM05D005752 ORTHO05D006959 5.4e-46 188.3 197 55.8
Dinv04371 Davidia involucrata HOM05D005752 ORTHO05D006959 2.3e-44 183.0 164 64.0
Pp3c25_5680 Physcomitrium patens HOM05D005752 ORTHO05D006959 6.6e-44 181.4 143 67.1
Pp3c16_8600 Physcomitrium patens HOM05D005752 ORTHO05D006959 9.5e-43 177.6 143 67.1
GSVIVG01024240001 Vitis vinifera HOM05D005752 ORTHO05D006959 1.2e-42 177.2 170 61.8
PGSC0003DMG400026968 Solanum tuberosum HOM05D005752 ORTHO05D006959 2.1e-42 176.4 223 49.8
SMO232G0035 Selaginella moellendorffii HOM05D005752 ORTHO05D006959 5.8e-40 168.3 196 52.6
Thecc.03G073300 Theobroma cacao HOM05D005752 ORTHO05D006959 7.5e-40 167.9 165 60.0
ClCG04G012440 Citrullus lanatus HOM05D005752 ORTHO05D006959 9.8e-40 167.5 214 50.0
MSTRG.23218 Avicennia marina HOM05D005752 ORTHO05D006959 3.7e-39 165.6 163 59.5
Ah.14g085830 Amaranthus hybridus HOM05D005752 ORTHO05D006959 2.4e-38 162.9 179 56.4
Eucgr.G00948 Eucalyptus grandis HOM05D005752 ORTHO05D006959 2.4e-38 162.9 169 58.0
CARHR066400 Cardamine hirsuta HOM05D005752 ORTHO05D006959 7.0e-38 161.4 164 57.9
CDE04G3451 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 2.0e-37 159.8 85 91.8
AUR62040639 Chenopodium quinoa HOM05D005752 ORTHO05D006959 2.0e-37 159.8 85 90.6
FAN18G3658 Fragaria x ananassa HOM05D005752 ORTHO05D006959 2.7e-37 159.5 85 90.6
RcHm_v2.0_Chr7g0218081 Rosa chinensis HOM05D005752 ORTHO05D006959 3.5e-37 159.1 85 89.4
FAN08G2690 Fragaria x ananassa HOM05D005752 ORTHO05D006959 6.0e-37 158.3 85 89.4
Nn4g25057 Nelumbo nucifera HOM05D005752 ORTHO05D006959 6.0e-37 158.3 85 90.6
SalBow5G5648 Salvia bowleyana HOM05D005752 ORTHO05D006959 6.0e-37 158.3 196 50.0
AL2G33120 Arabidopsis lyrata HOM05D005752 ORTHO05D006959 1.0e-36 157.5 180 55.6
CsaV3_1G005270 Cucumis sativus L. HOM05D005752 ORTHO05D006959 1.3e-36 157.1 85 89.4
Lalb_Chr14g0370131 Lupinus albus HOM05D005752 ORTHO05D006959 1.3e-36 157.1 85 89.4
HPP92_021122 Vanilla planifolia HOM05D005752 ORTHO05D006959 1.7e-36 156.8 85 88.2
C06p34060 Brassica napus HOM05D005752 ORTHO05D006959 5.0e-36 155.2 172 55.8
Eucgr.J01173 Eucalyptus grandis HOM05D005752 ORTHO05D006959 8.6e-36 154.5 160 57.5
HanXRQChr04g0126291 Helianthus annuus HOM05D005752 ORTHO05D006959 8.6e-36 154.5 85 87.1
Aa31LG4G3620 Aethionema arabicum HOM05D005752 ORTHO05D006959 1.5e-35 153.7 208 47.6
Cc00_g01570 Coffea canephora HOM05D005752 ORTHO05D006959 1.5e-35 153.7 86 89.5
BcaC08g45648 Brassica carinata HOM05D005752 ORTHO05D006959 8.1e-34 147.9 85 85.9
BolC6t38521H Brassica oleracea HOM05D005752 ORTHO05D006959 8.1e-34 147.9 85 85.9
Solyc06g150131.1 Solanum lycopersicum HOM05D005752 ORTHO05D006959 1.4e-33 147.1 168 53.0
Sabra04G0044500 Salix brachista HOM05D005752 ORTHO05D006959 1.8e-33 146.7 88 88.6
Phvul.004G136400 Phaseolus vulgaris HOM05D005752 ORTHO05D006959 2.3e-33 146.4 135 63.0
MBI03_g11902_MAGBIO Magnolia biondii HOM05D005752 ORTHO05D006959 3.4e-32 142.5 198 46.5
Rhsim08G0128600 Rhododendron simsii HOM05D005752 ORTHO05D006959 1.5e-27 127.1 276 38.0
Peaxi162Scf00171g00037 Petunia axillaris HOM05D005752 ORTHO05D006959 1.9e-27 126.7 83 77.1
CBR_g54189 Chara braunii HOM05D005752 ORTHO05D006959 2.5e-27 126.3 150 49.3
QL10p035764 Quercus lobata HOM05D005752 ORTHO05D006959 5.6e-27 125.2 266 38.0
Mapoly0033s0045 Marchantia polymorpha HOM05D005752 ORTHO05D006959 7.3e-27 124.8 170 48.8
Ca_25284_v3 Cicer arietinum L. HOM05D005752 ORTHO05D006959 3.6e-26 122.5 240 40.4
QL12p037498 Quercus lobata HOM05D005752 ORTHO05D006959 4.7e-26 122.1 271 36.5
AUR62041602 Chenopodium quinoa HOM05D005752 ORTHO05D006959 6.4e-23 111.7 101 62.4
MELO3C001966.2 Cucumis melo HOM05D005752 ORTHO05D006959 4.1e-22 109.0 303 34.3
COL.COLO4_38544 Corchorus olitorius HOM05D005752 ORTHO05D006959 1.2e-21 107.5 95 65.3
MD06G1000100 Malus domestica HOM05D005752 ORTHO05D006959 1.2e-21 107.5 63 81.0
Medtr6g068990 Medicago truncatula HOM05D005752 ORTHO05D006959 4.6e-21 105.5 186 42.5
Sopen06g028430 Solanum pennellii HOM05D005752 ORTHO05D006959 7.3e-19 98.2 115 50.4
vmacro17761 Vaccinium macrocarpon HOM05D005752 ORTHO05D006959 6.9e-17 91.7 169 38.5
Sopen03g029760 Solanum pennellii HOM05D005752 ORTHO05D006959 2.0e-16 90.1 45 97.8
QL10p031508 Quercus lobata HOM05D005752 ORTHO05D006959 3.4e-16 89.4 146 45.9
C06p47550 Brassica napus HOM05D005752 ORTHO05D006959 7.6e-16 88.2 46 93.5
BolC6t39793H Brassica oleracea HOM05D005752 ORTHO05D006959 7.6e-16 88.2 46 93.5
AagrBONN_evm.TU.Sc2ySwM_368.1654 Anthoceros agrestis HOM05D005752 ORTHO05D006959 9.9e-16 87.8 196 36.7
BcaC08g46759 Brassica carinata HOM05D005752 ORTHO05D006959 2.2e-15 86.7 281 33.5
Psat1g118960 Pisum sativum HOM05D005752 ORTHO05D006959 2.9e-15 86.3 148 44.6
FAN13G1309 Fragaria x ananassa HOM05D005752 ORTHO05D006959 4.9e-15 85.5 111 48.6
BcaC08g45649 Brassica carinata HOM05D005752 ORTHO05D006959 4.6e-13 79.0 114 45.6
Cpa.g.sc628.6 Carica papaya HOM05D005752 ORTHO05D006959 4.6e-13 79.0 156 41.7
GSVIVG01024241001 Vitis vinifera HOM05D005752 ORTHO05D006959 6.6e-12 75.1 40 85.0
SGA_v2.0_scaffold25G10718 Striga asiatica HOM05D005752 ORTHO05D006959 1.1e-09 67.8 112 43.8
CDE04G3305 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 1.4e-09 67.4 165 34.5
Cc00_g01560 Coffea canephora HOM05D005752 ORTHO05D006959 5.3e-09 65.5 85 48.2
Lalb_Chr14g0370141 Lupinus albus HOM05D005752 ORTHO05D006959 9.0e-09 64.7 58 55.2
AL2G33130 Arabidopsis lyrata HOM05D005752 ORTHO05D006959 1.2e-08 64.3 41 73.2
SHI05872 Sapria himalayana HOM05D005752 ORTHO05D006959 2.0e-08 63.5 85 47.1
SGA_v2.0_scaffold21G09651 Striga asiatica HOM05D005752 ORTHO05D006959 5.8e-08 62.0 40 72.5
HanXRQChr04g0126301 Helianthus annuus HOM05D005752 ORTHO05D006959 1.7e-07 60.5 43 72.1
CsaV3_1G005260 Cucumis sativus L. HOM05D005752 ORTHO05D006959 4.2e-06 55.8 85 45.9


User provided reference genes

Program Settings