Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008182g0010 Nicotiana tabacum HOM05D006666 ORTHO05D008276 1.3e-76 289.7 146 100.0
Nitab4.5_0009307g0050 Nicotiana tabacum HOM05D006666 ORTHO05D008276 1.1e-67 260.0 146 90.4
Peaxi162Scf00171g00030 Petunia axillaris HOM05D006666 ORTHO05D008276 7.4e-48 194.1 127 78.7
Solyc03g019880.3 Solanum lycopersicum HOM05D006666 ORTHO05D008276 1.5e-45 186.4 125 76.8
PGSC0003DMG400015210 Solanum tuberosum HOM05D006666 ORTHO05D008276 1.0e-44 183.7 128 75.8
Sopen03g029740 Solanum pennellii HOM05D006666 ORTHO05D008276 1.4e-43 179.9 126 75.4
CAN.G861.22 Capsicum annuum HOM05D006666 ORTHO05D008276 2.7e-42 175.6 126 71.4
TAR629G2781 Trochodendron aralioides HOM05D006666 ORTHO05D008276 5.3e-30 134.8 98 68.4
Dinv09758 Davidia involucrata HOM05D006666 ORTHO05D008276 6.9e-30 134.4 137 59.1
CiPaw.16G075700 Carya illinoinensis HOM05D006666 ORTHO05D008276 1.0e-28 130.6 133 56.4
SalBow5G0154 Salvia bowleyana HOM05D006666 ORTHO05D008276 1.3e-28 130.2 136 52.9
MSTRG.11567 Avicennia marina HOM05D006666 ORTHO05D008276 1.4e-27 126.7 124 55.6
Nn4g25066 Nelumbo nucifera HOM05D006666 ORTHO05D008276 2.5e-27 125.9 134 53.7
CSS0032824 Camellia sinensis var. sinensis HOM05D006666 ORTHO05D008276 7.2e-27 124.4 126 58.7
Cc00_g07700 Coffea canephora HOM05D006666 ORTHO05D008276 1.2e-26 123.6 125 52.8
SGA_v2.0_scaffold25G10726 Striga asiatica HOM05D006666 ORTHO05D008276 1.2e-26 123.6 111 64.9
Prupe.5G245400 Prunus persica HOM05D006666 ORTHO05D008276 3.6e-26 122.1 121 57.9
FvH4_5g18600 Fragaria vesca HOM05D006666 ORTHO05D008276 4.7e-26 121.7 128 55.5
FAN18G1406 Fragaria x ananassa HOM05D006666 ORTHO05D008276 4.7e-26 121.7 128 55.5
vmacro17828 Vaccinium macrocarpon HOM05D006666 ORTHO05D008276 3.9e-25 118.6 113 62.8
FAN08G1977 Fragaria x ananassa HOM05D006666 ORTHO05D008276 6.7e-25 117.9 120 55.0
Cfa017808 Carpinus fangiana HOM05D006666 ORTHO05D008276 8.8e-25 117.5 125 56.8
MELO3C001965.2 Cucumis melo HOM05D006666 ORTHO05D008276 8.8e-25 117.5 95 62.1
FAN13G2387 Fragaria x ananassa HOM05D006666 ORTHO05D008276 1.1e-24 117.1 119 54.6
Haze_18405 Corylus avellana HOM05D006666 ORTHO05D008276 2.0e-24 116.3 127 55.1
FAN04G1657 Fragaria x ananassa HOM05D006666 ORTHO05D008276 2.0e-24 116.3 120 53.3
PGR083G1370 Punica granatum HOM05D006666 ORTHO05D008276 2.6e-24 115.9 79 74.7
Sed0024015 Sechium edule HOM05D006666 ORTHO05D008276 2.6e-24 115.9 95 61.1
AUR62037011 Chenopodium quinoa HOM05D006666 ORTHO05D008276 5.7e-24 114.8 86 67.4
RcHm_v2.0_Chr7g0176901 Rosa chinensis HOM05D006666 ORTHO05D008276 5.7e-24 114.8 139 49.6
Ca_09926_v3 Cicer arietinum L. HOM05D006666 ORTHO05D008276 7.4e-24 114.4 130 50.0
ClCG04G012450 Citrullus lanatus HOM05D006666 ORTHO05D008276 7.4e-24 114.4 95 58.9
PSO063G5885 Papaver somniferum HOM05D006666 ORTHO05D008276 9.7e-24 114.0 82 67.1
PSO782G1773 Papaver somniferum HOM05D006666 ORTHO05D008276 9.7e-24 114.0 82 67.1
AUR62006207 Chenopodium quinoa HOM05D006666 ORTHO05D008276 1.3e-23 113.6 85 68.2
Eucgr.H00663 Eucalyptus grandis HOM05D006666 ORTHO05D008276 1.7e-23 113.2 83 69.9
Rhsim08G0006200 Rhododendron simsii HOM05D006666 ORTHO05D008276 1.7e-23 113.2 133 53.4
VMungo0720G1342 Vigna mungo HOM05D006666 ORTHO05D008276 2.2e-23 112.8 81 67.9
Glyma.10G174200 Glycine max HOM05D006666 ORTHO05D008276 2.8e-23 112.5 78 67.9
Sc10g0008660 Simmondsia chinensis HOM05D006666 ORTHO05D008276 2.8e-23 112.5 78 67.9
TPR.G8870 Trifolium pratense HOM05D006666 ORTHO05D008276 2.8e-23 112.5 94 60.6
Hma1.2p1_0816F.1_g222970 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 4.8e-23 111.7 118 54.2
Migut.O00284 Erythranthe guttata HOM05D006666 ORTHO05D008276 8.2e-23 110.9 129 55.0
TWI81G0077 Tripterygium wilfordii HOM05D006666 ORTHO05D008276 8.2e-23 110.9 79 70.9
DCAR_011403 Daucus carota HOM05D006666 ORTHO05D008276 1.1e-22 110.5 78 66.7
Lalb_Chr21g0311701 Lupinus albus HOM05D006666 ORTHO05D008276 1.1e-22 110.5 84 60.7
MD14G1247300 Malus domestica HOM05D006666 ORTHO05D008276 1.1e-22 110.5 124 52.4
Medtr1g077550 Medicago truncatula HOM05D006666 ORTHO05D008276 1.4e-22 110.2 94 58.5
Phvul.L006501 Phaseolus vulgaris HOM05D006666 ORTHO05D008276 1.4e-22 110.2 81 65.4
SalBow1G4610 Salvia bowleyana HOM05D006666 ORTHO05D008276 1.4e-22 110.2 73 72.6
MBI06_g22566_MAGBIO Magnolia biondii HOM05D006666 ORTHO05D008276 1.8e-22 109.8 81 69.1
Ah.15g090740 Amaranthus hybridus HOM05D006666 ORTHO05D008276 2.4e-22 109.4 85 65.9
Atru.chr9.23 Acer truncatum HOM05D006666 ORTHO05D008276 3.1e-22 109.0 79 69.6
Ciclev10023646m.g Citrus clementina HOM05D006666 ORTHO05D008276 4.1e-22 108.6 79 68.4
Potri.004G066900 Populus trichocarpa HOM05D006666 ORTHO05D008276 4.1e-22 108.6 74 74.3
ATR0124G047 Amborella trichopoda HOM05D006666 ORTHO05D008276 5.3e-22 108.2 101 57.4
Gohir.A07G062700 Gossypium hirsutum HOM05D006666 ORTHO05D008276 5.3e-22 108.2 78 65.4
Gorai.001G070900 Gossypium raimondii HOM05D006666 ORTHO05D008276 5.3e-22 108.2 78 65.4
Actinidia02653 Actinidia chinensis HOM05D006666 ORTHO05D008276 7.0e-22 107.8 126 54.8
EL10Ac7g16891 Beta vulgaris HOM05D006666 ORTHO05D008276 7.0e-22 107.8 79 67.1
GSVIVG01024243001 Vitis vinifera HOM05D006666 ORTHO05D008276 9.1e-22 107.5 78 70.5
CARHR027620 Cardamine hirsuta HOM05D006666 ORTHO05D008276 1.2e-21 107.1 129 48.8
Lj5g0025802 Lotus japonicus HOM05D006666 ORTHO05D008276 1.2e-21 107.1 81 64.2
HPP92_021068 Vanilla planifolia HOM05D006666 ORTHO05D008276 1.5e-21 106.7 135 50.4
CsaV3_1G005250 Cucumis sativus L. HOM05D006666 ORTHO05D008276 2.0e-21 106.3 79 64.6
Glyma.20G216200 Glycine max HOM05D006666 ORTHO05D008276 2.0e-21 106.3 84 61.9
CDE06G1954 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 2.6e-21 105.9 82 70.7
Duzib205G1681 Durio zibethinus HOM05D006666 ORTHO05D008276 2.6e-21 105.9 117 54.7
Gohir.D07G067300 Gossypium hirsutum HOM05D006666 ORTHO05D008276 2.6e-21 105.9 107 53.3
MD06G1241100 Malus domestica HOM05D006666 ORTHO05D008276 2.6e-21 105.9 134 51.5
Psat6g054440 Pisum sativum HOM05D006666 ORTHO05D008276 3.4e-21 105.5 87 60.9
THA.LOC104812606 Tarenaya hassleriana HOM05D006666 ORTHO05D008276 4.5e-21 105.1 80 70.0
C05p26900 Brassica napus HOM05D006666 ORTHO05D008276 5.9e-21 104.8 124 49.2
Oeu038394.2 Olea europaea HOM05D006666 ORTHO05D008276 5.9e-21 104.8 200 39.0
Hund06740 Selenicereus undatus HOM05D006666 ORTHO05D008276 5.9e-21 104.8 79 69.6
AT1G28150 Arabidopsis thaliana HOM05D006666 ORTHO05D008276 1.0e-20 104.0 75 70.7
BcaC05g26820 Brassica carinata HOM05D006666 ORTHO05D008276 1.0e-20 104.0 124 49.2
BolC5t31408H Brassica oleracea HOM05D006666 ORTHO05D008276 1.0e-20 104.0 124 49.2
HanXRQChr05g0141151 Helianthus annuus HOM05D006666 ORTHO05D008276 1.7e-20 103.2 118 49.2
Thecc.03G072200 Theobroma cacao HOM05D006666 ORTHO05D008276 1.7e-20 103.2 79 68.4
AL1G41680 Arabidopsis lyrata HOM05D006666 ORTHO05D008276 2.9e-20 102.4 75 69.3
A09p37900 Brassica napus HOM05D006666 ORTHO05D008276 3.8e-20 102.1 124 48.4
Sp1g24340 Schrenkiella parvula HOM05D006666 ORTHO05D008276 3.8e-20 102.1 121 48.8
BraA09t39302Z Brassica rapa HOM05D006666 ORTHO05D008276 5.0e-20 101.7 124 48.4
Thhalv10009115m.g Eutrema salsugineum HOM05D006666 ORTHO05D008276 5.0e-20 101.7 105 55.2
CDE04G3444 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 8.5e-20 100.9 82 67.1
Lsat_1_v5_gn_8_1660 Lactuca sativa HOM05D006666 ORTHO05D008276 8.5e-20 100.9 84 65.5
Aa31sc45G80 Aethionema arabicum HOM05D006666 ORTHO05D008276 1.1e-19 100.5 74 70.3
Manes.02G219900 Manihot esculenta HOM05D006666 ORTHO05D008276 1.1e-19 100.5 73 64.4
BraA07t28933Z Brassica rapa HOM05D006666 ORTHO05D008276 1.9e-19 99.8 75 66.7
BcaC06g35338 Brassica carinata HOM05D006666 ORTHO05D008276 2.5e-19 99.4 75 66.7
C07p17240 Brassica napus HOM05D006666 ORTHO05D008276 2.5e-19 99.4 75 66.7
BolC7t42228H Brassica oleracea HOM05D006666 ORTHO05D008276 2.5e-19 99.4 75 66.7
A07p11450 Brassica napus HOM05D006666 ORTHO05D008276 5.5e-19 98.2 75 66.7
ECA233G5286 Erigeron canadensis HOM05D006666 ORTHO05D008276 7.2e-19 97.8 71 66.2
SEGI_19522 Sequoiadendron giganteum HOM05D006666 ORTHO05D008276 7.2e-19 97.8 77 62.3
BcaB03g13950 Brassica carinata HOM05D006666 ORTHO05D008276 1.2e-18 97.1 75 66.7
Carub.0001s2658 Capsella rubella HOM05D006666 ORTHO05D008276 1.2e-18 97.1 79 64.6
unitig_749.g13724 Utricularia gibba HOM05D006666 ORTHO05D008276 1.6e-18 96.7 82 62.2
Os04g0528100 Oryza sativa ssp. japonica HOM05D006666 ORTHO05D008276 2.7e-18 95.9 80 63.8
Pp3c19_21970 Physcomitrium patens HOM05D006666 ORTHO05D008276 4.7e-18 95.1 84 56.0
AagrBONN_evm.TU.Sc2ySwM_344.686 Anthoceros agrestis HOM05D006666 ORTHO05D008276 1.4e-17 93.6 113 51.3
Mapoly0096s0047 Marchantia polymorpha HOM05D006666 ORTHO05D008276 8.8e-17 90.9 74 59.5
SMO143G0007 Selaginella moellendorffii HOM05D006666 ORTHO05D008276 8.8e-17 90.9 77 55.8
Aqoxy3G04334 Aquilegia oxysepala HOM05D006666 ORTHO05D008276 2.6e-16 89.4 81 56.8
arahy.Tifrunner.gnm1.ann1.UGS5Z8 Arachis hypogaea HOM05D006666 ORTHO05D008276 1.3e-15 87.0 99 46.5
QL10p036089 Quercus lobata HOM05D006666 ORTHO05D008276 6.3e-15 84.7 69 60.9
QL10p036477 Quercus lobata HOM05D006666 ORTHO05D008276 1.4e-14 83.6 61 63.9
Sabra04G0044800 Salix brachista HOM05D006666 ORTHO05D008276 1.4e-14 83.6 63 68.3
Sabra11G0106200 Salix brachista HOM05D006666 ORTHO05D008276 1.4e-14 83.6 63 68.3
Sabra17G0092500 Salix brachista HOM05D006666 ORTHO05D008276 1.4e-14 83.6 63 68.3
COL.COLO4_25502 Corchorus olitorius HOM05D006666 ORTHO05D008276 5.3e-14 81.6 60 70.0
Hma1.2p1_0816F.1_g222980 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 8.0e-10 67.8 57 63.2
MCO08G267 Micromonas commoda HOM05D006666 ORTHO05D008276 1.4e-09 67.0 66 48.5
COL.COLO4_37022 Corchorus olitorius HOM05D006666 ORTHO05D008276 6.7e-09 64.7 52 67.3
PRCOL_00004364 Prasinoderma coloniale HOM05D006666 ORTHO05D008276 2.0e-08 63.2 47 55.3
Cre03.g203800 Chlamydomonas reinhardtii HOM05D006666 ORTHO05D008276 4.4e-08 62.0 66 50.0


User provided reference genes

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