Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008160g0050 Nicotiana tabacum HOM05D000154 ORTHO05D283856 2.7e-52 208.4 105 100.0
Ca_09138_v3 Cicer arietinum L. HOM05D000154 ORTHO05D000092 2.8e-17 92.0 93 55.9
ClCG09G006160 Citrullus lanatus HOM05D000154 ORTHO05D000092 1.3e-14 83.2 100 47.0
Nitab4.5_0001697g0080 Nicotiana tabacum HOM05D000154 ORTHO05D000092 1.3e-14 83.2 106 49.1
Haze_04866 Corylus avellana HOM05D000154 ORTHO05D000092 6.5e-14 80.9 108 49.1
Peaxi162Scf00067g01613 Petunia axillaris HOM05D000154 ORTHO05D000092 2.5e-13 79.0 124 41.1
Aqoxy2G03032 Aquilegia oxysepala HOM05D000154 ORTHO05D000092 1.6e-12 76.3 100 43.0
Nitab4.5_0001697g0020 Nicotiana tabacum HOM05D000154 ORTHO05D000092 2.1e-12 75.9 137 42.3
Thecc.01G294600 Theobroma cacao HOM05D000154 ORTHO05D000092 4.9e-09 64.7 158 34.2
Ciclev10033931m.g Citrus clementina HOM05D000154 ORTHO05D000092 6.3e-09 64.3 176 31.2
TWI14G0312 Tripterygium wilfordii HOM05D000154 ORTHO05D000092 1.1e-08 63.5 41 75.6
Cfa005986 Carpinus fangiana HOM05D000154 ORTHO05D000092 1.8e-08 62.8 176 32.4
Haze_04869 Corylus avellana HOM05D000154 ORTHO05D000092 1.8e-08 62.8 146 34.2
Solyc09g074790.3 Solanum lycopersicum HOM05D000154 ORTHO05D000092 1.8e-08 62.8 36 80.6
ClCG10G010690 Citrullus lanatus HOM05D000154 ORTHO05D000092 2.4e-08 62.4 34 88.2
TWI14G0572 Tripterygium wilfordii HOM05D000154 ORTHO05D000092 3.1e-08 62.0 41 73.2
Nitab4.5_0007365g0020 Nicotiana tabacum HOM05D000154 ORTHO05D000092 4.1e-08 61.6 36 75.0
Psat3g023160 Pisum sativum HOM05D000154 ORTHO05D000092 4.1e-08 61.6 39 76.9
PGSC0003DMG401011387 Solanum tuberosum HOM05D000154 ORTHO05D000092 4.1e-08 61.6 178 30.9
CAN.G339.42 Capsicum annuum HOM05D000154 ORTHO05D000092 5.4e-08 61.2 35 80.0
Duzib077G0001 Durio zibethinus HOM05D000154 ORTHO05D000092 5.4e-08 61.2 34 85.3
Duzib138G1621 Durio zibethinus HOM05D000154 ORTHO05D000092 5.4e-08 61.2 34 85.3
Sopen09g029640 Solanum pennellii HOM05D000154 ORTHO05D000092 5.4e-08 61.2 178 29.8
SGA_v2.0_scaffold172G39077 Striga asiatica HOM05D000154 ORTHO05D000092 5.4e-08 61.2 35 82.9
Cc06_g16560 Coffea canephora HOM05D000154 ORTHO05D000092 7.0e-08 60.8 178 29.8
vmacro02483 Vaccinium macrocarpon HOM05D000154 ORTHO05D000092 7.0e-08 60.8 35 77.1
Cpa.g.sc9.194 Carica papaya HOM05D000154 ORTHO05D000092 9.2e-08 60.5 34 82.4
MELO3C017974.2 Cucumis melo HOM05D000154 ORTHO05D000092 9.2e-08 60.5 34 85.3
Lj1A34G31 Lonicera japonica HOM05D000154 ORTHO05D000092 9.2e-08 60.5 145 35.9
Solyc09g074800.2 Solanum lycopersicum HOM05D000154 ORTHO05D000092 9.2e-08 60.5 178 30.3
Manes.05G065200 Manihot esculenta HOM05D000154 ORTHO05D000092 1.2e-07 60.1 34 82.4
Rhsim13G0014800 Rhododendron simsii HOM05D000154 ORTHO05D000092 1.2e-07 60.1 35 74.3
CsaV3_4G000620 Cucumis sativus L. HOM05D000154 ORTHO05D000092 1.6e-07 59.7 34 82.4
Duzib138G0541 Durio zibethinus HOM05D000154 ORTHO05D000092 1.6e-07 59.7 34 79.4
Thecc.01G294700 Theobroma cacao HOM05D000154 ORTHO05D000092 1.6e-07 59.7 34 82.4
Cfa005977 Carpinus fangiana HOM05D000154 ORTHO05D000092 2.0e-07 59.3 33 81.8
COL.COLO4_00368 Corchorus olitorius HOM05D000154 ORTHO05D000092 2.0e-07 59.3 34 79.4
Nitab4.5_0001697g0040 Nicotiana tabacum HOM05D000154 ORTHO05D000092 2.0e-07 59.3 35 77.1
Nitab4.5_0008160g0010 Nicotiana tabacum HOM05D000154 ORTHO05D000092 2.0e-07 59.3 35 77.1
Actinidia09166 Actinidia chinensis HOM05D000154 ORTHO05D000092 2.7e-07 58.9 33 78.8
Gohir.A12G009900 Gossypium hirsutum HOM05D000154 ORTHO05D000092 2.7e-07 58.9 34 73.5
MBI19_g13574_MAGBIO Magnolia biondii HOM05D000154 ORTHO05D000092 2.7e-07 58.9 34 79.4
Psat3g023880 Pisum sativum HOM05D000154 ORTHO05D000092 2.7e-07 58.9 33 84.8
QL04p070795 Quercus lobata HOM05D000154 ORTHO05D000092 2.7e-07 58.9 33 84.8
QL12p030402 Quercus lobata HOM05D000154 ORTHO05D000092 2.7e-07 58.9 33 84.8
TAR633G2762 Trochodendron aralioides HOM05D000154 ORTHO05D000092 2.7e-07 58.9 33 81.8
VMungo0720G0160 Vigna mungo HOM05D000154 ORTHO05D000092 2.7e-07 58.9 178 30.3
Eucgr.H01187 Eucalyptus grandis HOM05D000154 ORTHO05D000092 3.5e-07 58.5 34 76.5
Eucgr.H01188 Eucalyptus grandis HOM05D000154 ORTHO05D000092 3.5e-07 58.5 34 76.5
Lj1C34T0 Lonicera japonica HOM05D000154 ORTHO05D000092 3.5e-07 58.5 180 30.0
QL12p030282 Quercus lobata HOM05D000154 ORTHO05D000092 3.5e-07 58.5 96 39.6
Sed0003142 Sechium edule HOM05D000154 ORTHO05D000092 3.5e-07 58.5 34 79.4
arahy.Tifrunner.gnm1.ann1.4S1WXZ Arachis hypogaea HOM05D000154 ORTHO05D000092 4.5e-07 58.2 176 30.1
CiPaw.08G098100 Carya illinoinensis HOM05D000154 ORTHO05D000092 4.5e-07 58.2 34 73.5
CiPaw.08G098200 Carya illinoinensis HOM05D000154 ORTHO05D000092 4.5e-07 58.2 34 73.5
Dinv19725 Davidia involucrata HOM05D000154 ORTHO05D000092 4.5e-07 58.2 35 74.3
Lalb_Chr21g0306791 Lupinus albus HOM05D000154 ORTHO05D000092 4.5e-07 58.2 176 30.1
Peaxi162Scf00067g01414 Petunia axillaris HOM05D000154 ORTHO05D000092 4.5e-07 58.2 35 77.1
RcHm_v2.0_Chr6g0293251 Rosa chinensis HOM05D000154 ORTHO05D000092 4.5e-07 58.2 33 81.8
TAR633G1618 Trochodendron aralioides HOM05D000154 ORTHO05D000092 4.5e-07 58.2 33 81.8
Ciclev10033923m.g Citrus clementina HOM05D000154 ORTHO05D000092 5.9e-07 57.8 34 73.5
Duzib133G1158 Durio zibethinus HOM05D000154 ORTHO05D000092 5.9e-07 57.8 34 76.5
Manes.01G215800 Manihot esculenta HOM05D000154 ORTHO05D000092 5.9e-07 57.8 33 81.8
Medtr7g108480 Medicago truncatula HOM05D000154 ORTHO05D000092 5.9e-07 57.8 33 78.8
Oeu046703.1 Olea europaea HOM05D000154 ORTHO05D000092 5.9e-07 57.8 35 77.1
Prupe.8G256200 Prunus persica HOM05D000154 ORTHO05D000092 5.9e-07 57.8 35 71.4
TAR633G2423 Trochodendron aralioides HOM05D000154 ORTHO05D000092 5.9e-07 57.8 33 81.8
vmacro09040 Vaccinium macrocarpon HOM05D000154 ORTHO05D000092 5.9e-07 57.8 90 35.6
vmacro16263 Vaccinium macrocarpon HOM05D000154 ORTHO05D000092 5.9e-07 57.8 90 35.6
Cfa005980 Carpinus fangiana HOM05D000154 ORTHO05D000092 7.7e-07 57.4 33 75.8
FvH4_c6g00050 Fragaria vesca HOM05D000154 ORTHO05D000092 7.7e-07 57.4 35 74.3
FAN15G1621 Fragaria x ananassa HOM05D000154 ORTHO05D000092 7.7e-07 57.4 35 74.3
FAN20G1505 Fragaria x ananassa HOM05D000154 ORTHO05D000092 7.7e-07 57.4 35 74.3
FAN24G1215 Fragaria x ananassa HOM05D000154 ORTHO05D000092 7.7e-07 57.4 35 74.3
MD11G1302600 Malus domestica HOM05D000154 ORTHO05D000092 7.7e-07 57.4 33 75.8
MD11G1303100 Malus domestica HOM05D000154 ORTHO05D000092 7.7e-07 57.4 33 75.8
unitig_27.g25197 Utricularia gibba HOM05D000154 ORTHO05D000092 7.7e-07 57.4 94 36.2
vmacro02479 Vaccinium macrocarpon HOM05D000154 ORTHO05D000092 7.7e-07 57.4 33 78.8
arahy.Tifrunner.gnm1.ann1.0M60B9 Arachis hypogaea HOM05D000154 ORTHO05D000092 1.0e-06 57.0 178 31.5
arahy.Tifrunner.gnm1.ann1.56TK9W Arachis hypogaea HOM05D000154 ORTHO05D000092 1.0e-06 57.0 178 31.5
CiPaw.07G104000 Carya illinoinensis HOM05D000154 ORTHO05D000092 1.0e-06 57.0 35 71.4
CiPaw.08G098300 Carya illinoinensis HOM05D000154 ORTHO05D000092 1.0e-06 57.0 176 29.0
GSVIVG01010949001 Vitis vinifera HOM05D000154 ORTHO05D000092 1.0e-06 57.0 35 68.6
GSVIVG01010950001 Vitis vinifera HOM05D000154 ORTHO05D000092 1.0e-06 57.0 35 68.6
GSVIVG01010951001 Vitis vinifera HOM05D000154 ORTHO05D000092 1.0e-06 57.0 35 68.6
GSVIVG01010956001 Vitis vinifera HOM05D000154 ORTHO05D000092 1.0e-06 57.0 35 68.6
Atru.chr5.1225 Acer truncatum HOM05D000154 ORTHO05D000092 1.3e-06 56.6 33 78.8
FAN27G1960 Fragaria x ananassa HOM05D000154 ORTHO05D000092 1.3e-06 56.6 33 78.8
Gohir.D12G009900 Gossypium hirsutum HOM05D000154 ORTHO05D000092 1.3e-06 56.6 33 72.7
Gorai.008G009900 Gossypium raimondii HOM05D000154 ORTHO05D000092 1.3e-06 56.6 33 72.7
MBI19_g23980_MAGBIO Magnolia biondii HOM05D000154 ORTHO05D000092 1.3e-06 56.6 33 78.8
COL.COLO4_23402 Corchorus olitorius HOM05D000154 ORTHO05D000092 1.7e-06 56.2 33 72.7
Sed0008921 Sechium edule HOM05D000154 ORTHO05D000092 1.7e-06 56.2 36 72.2
TPR.G9650 Trifolium pratense HOM05D000154 ORTHO05D000092 1.7e-06 56.2 33 75.8
Haze_04867 Corylus avellana HOM05D000154 ORTHO05D000092 2.3e-06 55.8 96 36.5
FAN09G1559 Fragaria x ananassa HOM05D000154 ORTHO05D000092 2.3e-06 55.8 33 78.8
FAN09G2869 Fragaria x ananassa HOM05D000154 ORTHO05D000092 2.3e-06 55.8 33 78.8
FAN09G4051 Fragaria x ananassa HOM05D000154 ORTHO05D000092 2.3e-06 55.8 33 78.8
PGR119G0962 Punica granatum HOM05D000154 ORTHO05D000092 2.3e-06 55.8 33 78.8
RcHm_v2.0_Chr2g0136981 Rosa chinensis HOM05D000154 ORTHO05D000092 2.3e-06 55.8 33 75.8
CSS0023822 Camellia sinensis var. sinensis HOM05D000154 ORTHO05D000092 2.9e-06 55.5 33 69.7
CAN.G1471.1 Capsicum annuum HOM05D000154 ORTHO05D000092 2.9e-06 55.5 36 69.4
Haze_04864 Corylus avellana HOM05D000154 ORTHO05D000092 2.9e-06 55.5 33 75.8
Haze_05321 Corylus avellana HOM05D000154 ORTHO05D000092 2.9e-06 55.5 33 75.8
MELO3C016040.2 Cucumis melo HOM05D000154 ORTHO05D000092 2.9e-06 55.5 33 75.8
CsaV3_7G029000 Cucumis sativus L. HOM05D000154 ORTHO05D000092 2.9e-06 55.5 33 75.8
PSO017G4099 Papaver somniferum HOM05D000154 ORTHO05D000092 2.9e-06 55.5 33 72.7
PSO170G3703 Papaver somniferum HOM05D000154 ORTHO05D000092 2.9e-06 55.5 33 72.7
Potri.014G132500 Populus trichocarpa HOM05D000154 ORTHO05D000092 2.9e-06 55.5 33 75.8
Hma1.2p1_0209F.1_g088800 Hydrangea macrophylla HOM05D000154 ORTHO05D000092 3.8e-06 55.1 35 68.6
MD11G1302900 Malus domestica HOM05D000154 ORTHO05D000092 3.8e-06 55.1 33 72.7
Atru.chr5.1226 Acer truncatum HOM05D000154 ORTHO05D000092 5.0e-06 54.7 33 75.8
QL12p030340 Quercus lobata HOM05D000154 ORTHO05D000092 5.0e-06 54.7 34 67.6
Sabra14G0098700 Salix brachista HOM05D000154 ORTHO05D000092 5.0e-06 54.7 34 67.6
Sabra14G0098800 Salix brachista HOM05D000154 ORTHO05D000092 5.0e-06 54.7 34 67.6
MELO3C016041.2 Cucumis melo HOM05D000154 ORTHO05D000092 6.6e-06 54.3 33 75.8
CsaV3_7G028990 Cucumis sativus L. HOM05D000154 ORTHO05D000092 6.6e-06 54.3 33 75.8
Rhsim13G0014600 Rhododendron simsii HOM05D000154 ORTHO05D000092 6.6e-06 54.3 33 72.7
Ciclev10023362m.g Citrus clementina HOM05D000154 ORTHO05D000092 8.6e-06 53.9 39 66.7
COL.COLO4_03670 Corchorus olitorius HOM05D000154 ORTHO05D000092 8.6e-06 53.9 33 75.8
MD03G1283600 Malus domestica HOM05D000154 ORTHO05D000092 8.6e-06 53.9 33 69.7


User provided reference genes

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