Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008160g0030 Nicotiana tabacum HOM05D000024 ORTHO05D282591 5.4e-126 454.5 258 100.0
Nitab4.5_0004658g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-57 226.1 203 70.9
Nitab4.5_0003397g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 6.7e-44 181.8 192 63.5
Nitab4.5_0000023g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.3e-34 148.7 203 46.8
Nitab4.5_0000096g0340 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.5e-31 138.7 215 41.4
Nitab4.5_0000500g0250 Nicotiana tabacum HOM05D000024 ORTHO05D285919 3.6e-29 132.9 104 62.5
Nitab4.5_0001130g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-28 131.3 170 60.0
Nitab4.5_0000404g0050 Nicotiana tabacum HOM05D000024 ORTHO05D283760 2.3e-28 130.2 106 62.3
Nitab4.5_0005500g0060 Nicotiana tabacum HOM05D000024 ORTHO05D284227 5.3e-25 119.0 229 38.0
Nitab4.5_0007254g0020 Nicotiana tabacum HOM05D000024 ORTHO05D283683 7.0e-25 118.6 132 60.6
Nitab4.5_0000106g0450 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-24 117.1 78 73.1
Nitab4.5_0006324g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.1e-21 107.1 230 35.2
Nitab4.5_0001375g0030 Nicotiana tabacum HOM05D000024 ORTHO05D285087 3.0e-20 103.2 72 68.1
Nitab4.5_0000952g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.7e-20 102.1 175 39.4
Nitab4.5_0000164g0060 Nicotiana tabacum HOM05D000024 ORTHO05D283039 4.4e-19 99.4 90 61.1
Nitab4.5_0003374g0100 Nicotiana tabacum HOM05D000024 ORTHO05D283255 4.4e-19 99.4 157 43.9
Nitab4.5_0000573g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.5e-19 98.6 198 36.9
Nitab4.5_0001307g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-13 80.5 132 39.4
Nitab4.5_0013732g0010 Nicotiana tabacum HOM05D000024 ORTHO05D283900 7.5e-11 72.0 127 36.2
Nitab4.5_0000082g0230 Nicotiana tabacum HOM05D011002 ORTHO05D000006 9.8e-11 71.6 98 44.9
Nitab4.5_0002289g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.3e-10 68.9 84 47.6
Nitab4.5_0002966g0080 Nicotiana tabacum HOM05D012219 ORTHO05D286250 1.0e-07 61.6 234 27.4
Nitab4.5_0025326g0010 Nicotiana tabacum HOM05D012219 ORTHO05D000007 2.9e-07 60.1 100 41.0
Nitab4.5_0002847g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.5e-07 58.5 54 53.7
Nitab4.5_0005284g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.5e-07 58.5 152 30.9
Nitab4.5_0000370g0070 Nicotiana tabacum HOM05D012219 ORTHO05D000006 3.2e-06 56.6 85 43.5
Nitab4.5_0000379g0060 Nicotiana tabacum HOM05D011002 ORTHO05D283817 4.2e-06 56.2 119 31.9
Nitab4.5_0005284g0040 Nicotiana tabacum HOM05D011002 ORTHO05D285812 4.2e-06 56.2 151 29.8
Nitab4.5_0000457g0440 Nicotiana tabacum HOM05D011002 ORTHO05D000007 9.4e-06 55.1 134 33.6


User provided reference genes

Program Settings