Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008157g0050 Nicotiana tabacum HOM05D008706 ORTHO05D010440 1.2e-219 766.1 372 100.0
Nitab4.5_0001201g0040 Nicotiana tabacum HOM05D008706 ORTHO05D010440 7.1e-196 687.2 407 84.8
Nitab4.5_0001201g0090 Nicotiana tabacum HOM05D008706 ORTHO05D010440 2.2e-157 559.3 407 72.2
Peaxi162Scf00347g00087 Petunia axillaris HOM05D008706 ORTHO05D010440 1.4e-135 486.9 416 63.5
Sopen01g043690 Solanum pennellii HOM05D008706 ORTHO05D010440 1.7e-104 383.6 413 54.7
Sopen01g043720 Solanum pennellii HOM05D008706 ORTHO05D010440 1.7e-104 383.6 413 54.7
PGSC0003DMG400024780 Solanum tuberosum HOM05D008706 ORTHO05D010440 2.7e-102 376.3 410 53.9
Nitab4.5_0002715g0090 Nicotiana tabacum HOM05D008706 ORTHO05D010440 1.7e-101 373.6 410 55.4
Nitab4.5_0002715g0100 Nicotiana tabacum HOM05D008706 ORTHO05D010440 4.1e-95 352.4 377 56.5
Peaxi162Scf00136g00622 Petunia axillaris HOM05D008706 ORTHO05D010440 1.4e-90 337.4 309 59.5
PGSC0003DMG400037185 Solanum tuberosum HOM05D008706 ORTHO05D010440 3.4e-81 306.2 410 47.8
PGSC0003DMG400008068 Solanum tuberosum HOM05D008706 ORTHO05D010440 4.4e-81 305.8 390 49.0
PGSC0003DMG400037851 Solanum tuberosum HOM05D008706 ORTHO05D010440 5.8e-81 305.4 416 46.6
PGSC0003DMG400009874 Solanum tuberosum HOM05D008706 ORTHO05D010440 5.4e-79 298.9 398 46.5
PGSC0003DMG400009944 Solanum tuberosum HOM05D008706 ORTHO05D010440 1.2e-78 297.7 414 46.1
PGSC0003DMG400008116 Solanum tuberosum HOM05D008706 ORTHO05D010440 7.3e-76 288.5 386 45.9
Nitab4.5_0000368g0410 Nicotiana tabacum HOM05D008706 ORTHO05D010440 9.6e-76 288.1 317 53.0
Sopen12g023140 Solanum pennellii HOM05D008706 ORTHO05D010440 1.2e-75 287.7 397 46.1
Sopen12g023130 Solanum pennellii HOM05D008706 ORTHO05D010440 8.1e-75 285.0 397 46.3
CAN.G546.3 Capsicum annuum HOM05D008706 ORTHO05D010440 5.2e-74 282.3 307 52.4
Sopen12g023120 Solanum pennellii HOM05D008706 ORTHO05D010440 5.2e-74 282.3 339 49.9
Solyc12g044775.1 Solanum lycopersicum HOM05D008706 ORTHO05D010440 9.0e-74 281.6 393 45.5
Solyc12g044790.1 Solanum lycopersicum HOM05D008706 ORTHO05D010440 2.4e-71 273.5 397 44.6
Solyc12g044780.2 Solanum lycopersicum HOM05D008706 ORTHO05D010440 3.5e-70 269.6 339 47.8
Peaxi162Scf00073g00111 Petunia axillaris HOM05D008706 ORTHO05D010440 7.8e-70 268.5 377 48.0
Peaxi162Scf01026g00232 Petunia axillaris HOM05D008706 ORTHO05D010440 3.0e-69 266.5 285 54.4
PGSC0003DMG400009945 Solanum tuberosum HOM05D008706 ORTHO05D010440 5.1e-69 265.8 318 48.7
Peaxi162Scf01164g00027 Petunia axillaris HOM05D008706 ORTHO05D010440 1.9e-68 263.8 395 42.8
Peaxi162Scf00105g00614 Petunia axillaris HOM05D008706 ORTHO05D010440 1.3e-67 261.2 222 61.7
Peaxi162Scf01164g10021 Petunia axillaris HOM05D008706 ORTHO05D010440 1.5e-57 227.6 390 39.7
CAN.G546.5 Capsicum annuum HOM05D008706 ORTHO05D010440 4.5e-57 226.1 321 46.4
Solyc11g069120.1 Solanum lycopersicum HOM05D008706 ORTHO05D010440 1.4e-55 221.1 293 48.1
PGSC0003DMG400022280 Solanum tuberosum HOM05D008706 ORTHO05D010440 9.6e-52 208.4 412 36.7
CAN.G1476.3 Capsicum annuum HOM05D008706 ORTHO05D010440 7.6e-41 172.2 407 33.2
CAN.G396.6 Capsicum annuum HOM05D008706 ORTHO05D010440 1.1e-36 158.3 266 40.2
Sopen11g027850 Solanum pennellii HOM05D008706 ORTHO05D010440 2.6e-28 130.6 134 51.5
Nitab4.5_0006875g0050 Nicotiana tabacum HOM05D008706 ORTHO05D010440 2.2e-27 127.5 161 46.6
Nitab4.5_0003349g0020 Nicotiana tabacum HOM05D008706 ORTHO05D010440 7.7e-25 119.0 194 46.4
Sopen12g023150 Solanum pennellii HOM05D008706 ORTHO05D010440 3.2e-23 113.6 189 39.7
Duzib177G0763 Durio zibethinus HOM05D007779 ORTHO05D009863 3.7e-19 100.1 212 32.1
COL.COLO4_15414 Corchorus olitorius HOM05D007779 ORTHO05D009863 3.1e-18 97.1 224 30.8
Actinidia26989 Actinidia chinensis HOM05D007779 ORTHO05D010440 1.2e-17 95.1 206 31.6
PGSC0003DMG400039069 Solanum tuberosum HOM05D008706 ORTHO05D010440 7.7e-17 92.4 139 41.0
Ciclev10019572m.g Citrus clementina HOM05D007779 ORTHO05D009863 5.5e-15 86.3 211 30.3
Atru.chr2.884 Acer truncatum HOM05D007779 ORTHO05D009863 9.4e-15 85.5 211 29.4
Gorai.004G248800 Gossypium raimondii HOM05D007779 ORTHO05D009863 2.1e-14 84.3 209 30.1
Gohir.D08G234100 Gossypium hirsutum HOM05D007779 ORTHO05D009863 3.6e-14 83.6 209 30.1
Gohir.A08G217100 Gossypium hirsutum HOM05D007779 ORTHO05D009863 1.4e-13 81.6 209 29.7
Sed0013342 Sechium edule HOM05D021455 ORTHO05D010440 1.4e-13 81.6 279 28.3
Potri.019G013900 Populus trichocarpa HOM05D007779 ORTHO05D009863 2.3e-13 80.9 197 29.4
Sabra19G0016500 Salix brachista HOM05D007779 ORTHO05D009863 2.6e-12 77.4 216 29.6
TWI56G0837 Tripterygium wilfordii HOM05D007779 ORTHO05D009863 2.6e-12 77.4 190 28.4
Sabra19G0026600 Salix brachista HOM05D007779 ORTHO05D009863 5.7e-12 76.3 214 29.9
Nitab4.5_0002715g0110 Nicotiana tabacum HOM05D000488 ORTHO05D010440 7.5e-12 75.9 166 39.2
BcaB05g21790 Brassica carinata HOM05D007779 ORTHO05D009863 1.3e-11 75.1 186 28.5
TAR371G0827 Trochodendron aralioides HOM05D002420 ORTHO05D002422 3.7e-11 73.6 286 26.2
QL03p029097 Quercus lobata HOM05D007779 ORTHO05D009863 4.8e-11 73.2 233 28.8
Prupe.6G347200 Prunus persica HOM05D007779 ORTHO05D009863 8.2e-11 72.4 195 28.7
Dinv23189 Davidia involucrata HOM05D000571 ORTHO05D000435 1.4e-10 71.6 294 26.2
Aqoxy7G00772 Aquilegia oxysepala HOM05D008706 ORTHO05D010440 4.1e-10 70.1 213 28.2
Rhsim08G0237800 Rhododendron simsii HOM05D001729 ORTHO05D001155 5.9e-09 66.2 304 24.7
Os05g0139200 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D000491 7.7e-09 65.9 402 23.9
RcHm_v2.0_Chr4g0398061 Rosa chinensis HOM05D000664 ORTHO05D000491 7.7e-09 65.9 371 24.0
Aqoxy7G01704 Aquilegia oxysepala HOM05D015194 ORTHO05D010440 1.7e-08 64.7 309 25.6
Aqoxy7G01734 Aquilegia oxysepala HOM05D015194 ORTHO05D010440 2.9e-08 63.9 306 24.2
Rhsim08G0238800 Rhododendron simsii HOM05D001729 ORTHO05D001155 5.0e-08 63.2 408 21.3
FvH4_2g24261 Fragaria vesca HOM05D001729 ORTHO05D001155 6.5e-08 62.8 241 27.0
Lsat_1_v5_gn_4_180620 Lactuca sativa HOM05D008898 ORTHO05D001155 6.5e-08 62.8 211 26.1
Lsat_1_v5_gn_0_16480 Lactuca sativa HOM05D008898 ORTHO05D001155 1.1e-07 62.0 214 29.9
Os05g0177100 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 1.1e-07 62.0 291 27.5
Lj4g0009025 Lotus japonicus HOM05D002420 ORTHO05D002422 3.2e-07 60.5 204 26.5
FAN17G0956 Fragaria x ananassa HOM05D000664 ORTHO05D000491 4.2e-07 60.1 369 25.2
Aqoxy5G01770 Aquilegia oxysepala HOM05D000664 ORTHO05D009863 5.5e-07 59.7 306 24.5
HanXRQChr17g0547181 Helianthus annuus HOM05D008898 ORTHO05D001155 7.2e-07 59.3 198 27.3
Lsat_1_v5_gn_5_38300 Lactuca sativa HOM05D008898 ORTHO05D001155 1.6e-06 58.2 171 28.7
Peaxi162Scf00105g00613 Petunia axillaris HOM05D008706 ORTHO05D010440 2.7e-06 57.4 104 41.3
Dinv26464 Davidia involucrata HOM05D000664 ORTHO05D000491 3.6e-06 57.0 301 26.2
Os05g0177400 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 3.6e-06 57.0 294 27.2
PSO541G4053 Papaver somniferum HOM05D008326 ORTHO05D001155 3.6e-06 57.0 193 25.9


User provided reference genes

Program Settings