Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 2.1e-205 718.8 361 100.0
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 4.2e-193 677.9 370 92.7
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 2.4e-180 635.6 382 85.1
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 6.9e-180 634.0 380 85.3
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 1.2e-179 633.3 376 84.8
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 6.7e-175 617.5 371 84.6
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 5.5e-169 597.8 442 72.9
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 2.3e-151 539.3 348 77.3
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 3.3e-150 535.4 325 80.3
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 5.7e-150 534.6 377 71.9
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 1.7e-149 533.1 346 75.4
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 1.4e-148 530.0 323 78.9
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 1.4e-148 530.0 346 76.0
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 3.1e-148 528.9 337 75.7
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 3.1e-148 528.9 332 78.3
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 1.2e-147 526.9 345 74.2
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 2.0e-147 526.2 353 72.5
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 1.3e-146 523.5 345 75.1
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 2.9e-146 522.3 335 77.6
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 1.1e-145 520.4 331 76.7
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 2.5e-145 519.2 331 76.4
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 1.2e-144 516.9 355 72.1
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 1.2e-144 516.9 349 72.8
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 6.1e-144 514.6 343 73.5
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 8.0e-144 514.2 343 73.2
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 2.0e-142 509.6 345 73.6
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 3.7e-141 505.4 322 75.5
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 6.3e-141 504.6 323 74.6
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 6.3e-141 504.6 323 75.5
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 6.3e-141 504.6 335 73.4
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 5.3e-140 501.5 322 74.8
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 5.3e-140 501.5 348 71.6
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 1.2e-139 500.4 351 69.8
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 1.2e-139 500.4 333 73.6
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 4.5e-139 498.4 356 70.5
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 7.7e-139 497.7 351 68.7
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 1.3e-138 496.9 361 67.9
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 1.7e-138 496.5 352 69.6
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 1.5e-137 493.4 326 72.7
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 2.5e-137 492.7 326 73.0
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 3.2e-137 492.3 371 65.5
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 4.2e-137 491.9 335 69.6
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 2.7e-136 489.2 348 68.1
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 6.1e-136 488.0 368 67.1
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 1.8e-135 486.5 325 72.9
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 2.3e-135 486.1 342 68.1
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 3.0e-135 485.7 320 72.8
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 5.2e-135 485.0 325 72.6
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 5.2e-135 485.0 325 72.6
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 1.5e-134 483.4 445 58.9
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 2.0e-134 483.0 322 72.0
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 2.6e-134 482.6 333 68.8
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 2.4e-132 476.1 321 70.7
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 1.2e-131 473.8 321 71.7
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 7.7e-131 471.1 345 66.1
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 2.5e-129 466.1 346 66.8
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 2.1e-128 463.0 332 68.1
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 6.8e-127 458.0 290 76.2
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 1.5e-126 456.8 296 74.7
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 7.5e-126 454.5 361 64.5
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 1.1e-124 450.7 279 79.2
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 5.0e-122 441.8 299 72.6
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 1.6e-120 436.8 300 70.7
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 8.9e-119 431.0 330 67.0
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 8.3e-117 424.5 306 69.0
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 1.2e-110 404.1 340 61.5
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 1.9e-108 396.7 322 59.6
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 1.2e-107 394.0 277 67.5
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 8.6e-106 387.9 325 58.5
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 9.5e-105 384.4 267 69.3
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 2.1e-104 383.3 289 65.1
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 6.0e-99 365.2 330 53.6
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 1.2e-96 357.5 328 60.4
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 1.5e-94 350.5 270 65.9
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 1.7e-90 337.0 328 56.7
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 9.6e-89 331.3 216 74.5
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 1.3e-77 294.3 221 65.6
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 7.1e-76 288.5 204 64.7
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 2.7e-75 286.6 326 43.9
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 3.5e-75 286.2 204 70.1
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 3.6e-72 276.2 321 46.1
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 4.0e-71 272.7 348 42.8
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 1.2e-70 271.2 200 67.0
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 1.6e-67 260.8 233 57.9
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 1.5e-65 254.2 262 53.4
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 4.3e-65 252.7 217 59.0
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 2.1e-64 250.4 395 37.7
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 6.2e-64 248.8 249 52.2
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 1.4e-63 247.7 213 55.9
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 4.9e-61 239.2 254 50.4
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 8.2e-56 221.9 362 37.0
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 3.2e-52 209.9 304 37.2
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 1.2e-51 208.0 305 37.0
Haze_13351 Corylus avellana HOM05D006652 ORTHO05D008645 9.7e-49 198.4 120 79.2
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 3.7e-48 196.4 327 33.9
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 6.3e-48 195.7 314 38.9
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 1.4e-47 194.5 307 37.8
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 5.3e-47 192.6 134 66.4
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 1.0e-45 188.3 306 35.3
Ca_18891_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 3.0e-42 176.8 126 68.3
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 1.7e-40 171.0 205 46.8
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 4.5e-38 162.9 318 31.4
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 4.5e-38 162.9 311 33.8
ECA234G0151 Erigeron canadensis HOM05D006652 ORTHO05D008645 8.5e-37 158.7 104 69.2
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 1.5e-33 147.9 93 76.3
AUR62024835 Chenopodium quinoa HOM05D006652 ORTHO05D008645 1.0e-29 135.2 123 55.3
AagrBONN_evm.TU.Sc2ySwM_117.2543 Anthoceros agrestis HOM05D006652 ORTHO05D008645 1.6e-27 127.9 174 40.8
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 2.1e-27 127.5 138 50.0
TPR.G21704 Trifolium pratense HOM05D006652 ORTHO05D008645 1.2e-25 121.7 117 54.7
Cc05_g08180 Coffea canephora HOM05D006652 ORTHO05D008645 8.5e-21 105.5 57 91.2
Cc05_g08150 Coffea canephora HOM05D006652 ORTHO05D008645 4.2e-20 103.2 57 89.5
PRCOL_00001996 Prasinoderma coloniale HOM05D006652 ORTHO05D028803 4.0e-18 96.7 239 28.5
MCO09G339 Micromonas commoda HOM05D006652 ORTHO05D268879 2.8e-16 90.5 232 27.2
MCO15G420 Micromonas commoda HOM05D006652 ORTHO05D028803 2.4e-15 87.4 263 24.7
Cre06.g286350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 3.5e-14 83.6 231 25.5
Glyma.12G122501 Glycine max HOM05D006652 ORTHO05D008645 2.3e-13 80.9 87 46.0
PRCOL_00002129 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 2.9e-13 80.5 233 28.3
Ah.07g202300 Amaranthus hybridus HOM05D006652 ORTHO05D008645 9.5e-12 75.5 95 43.2
Zm00001eb048070 Zea mays HOM05D001272 ORTHO05D001099 1.6e-11 74.7 153 36.6
Cre06.g286300 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 3.6e-11 73.6 240 27.1
Haze_13352 Corylus avellana HOM05D006652 ORTHO05D008645 1.0e-10 72.0 87 43.7
Ah.08g222620 Amaranthus hybridus HOM05D006652 ORTHO05D008645 2.3e-10 70.9 55 56.4
SMO358G0637 Selaginella moellendorffii HOM05D005748 ORTHO05D007123 4.1e-07 60.1 119 34.5
BcaB03g11936 Brassica carinata HOM05D005748 ORTHO05D007123 2.0e-06 57.8 121 29.8
SMO119G0172 Selaginella moellendorffii HOM05D003793 ORTHO05D004471 2.7e-06 57.4 136 33.1
SMO115G0333 Selaginella moellendorffii HOM05D003793 ORTHO05D004471 3.5e-06 57.0 136 33.1
CDE02G4569 Ceratophyllum demersum HOM05D005748 ORTHO05D007123 4.5e-06 56.6 122 28.7
Nn3g16801 Nelumbo nucifera HOM05D005748 ORTHO05D007123 4.5e-06 56.6 127 32.3


User provided reference genes

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