Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008137g0070 Nicotiana tabacum HOM05D011204 ORTHO05D011566 5.1e-304 1047.0 542 100.0
Nitab4.5_0003796g0020 Nicotiana tabacum HOM05D011204 ORTHO05D011566 1.0e-275 953.0 551 90.2
CAN.G731.1 Capsicum annuum HOM05D011204 ORTHO05D011566 6.1e-47 193.0 381 32.0
Nitab4.5_0003300g0070 Nicotiana tabacum HOM05D011204 ORTHO05D011566 3.0e-38 164.1 369 31.2
Nitab4.5_0008539g0030 Nicotiana tabacum HOM05D011204 ORTHO05D011566 7.5e-37 159.5 204 38.2
Nitab4.5_0000780g0120 Nicotiana tabacum HOM05D011204 ORTHO05D011566 3.5e-26 124.0 269 31.2
Nitab4.5_0004673g0020 Nicotiana tabacum HOM05D011204 ORTHO05D011566 1.9e-24 118.2 178 37.1
CAN.G69.1 Capsicum annuum HOM05D011204 ORTHO05D011566 2.0e-21 108.2 174 32.2
Nitab4.5_0005134g0030 Nicotiana tabacum HOM05D011204 ORTHO05D011566 2.9e-20 104.4 116 42.2
Nitab4.5_0001918g0010 Nicotiana tabacum HOM05D032685 ORTHO05D011566 3.5e-18 97.4 353 23.8
arahy.Tifrunner.gnm1.ann1.F53IXF Arachis hypogaea HOM05D005718 ORTHO05D004853 7.8e-18 96.3 255 30.6
SHI06343 Sapria himalayana HOM05D000014 ORTHO05D000093 7.8e-18 96.3 174 31.0
Oeu036146.1 Olea europaea HOM05D007234 ORTHO05D008488 3.3e-16 90.9 239 28.5
Nitab4.5_0012486g0010 Nicotiana tabacum HOM05D011204 ORTHO05D011566 6.2e-15 86.7 277 24.9
Oeu045905.1 Olea europaea HOM05D007234 ORTHO05D008488 6.2e-15 86.7 243 28.0
Nitab4.5_0000168g0190 Nicotiana tabacum HOM05D011204 ORTHO05D011566 8.0e-15 86.3 129 35.7
Oeu049634.1 Olea europaea HOM05D007234 ORTHO05D008488 3.1e-14 84.3 233 28.8
Oeu063638.1 Olea europaea HOM05D007234 ORTHO05D008488 4.0e-14 84.0 221 28.1
Nitab4.5_0001697g0050 Nicotiana tabacum HOM05D013720 ORTHO05D011566 5.8e-13 80.1 114 36.0
Nitab4.5_0002366g0030 Nicotiana tabacum HOM05D011204 ORTHO05D011566 1.3e-12 79.0 119 35.3
Oeu048494.1 Olea europaea HOM05D007234 ORTHO05D008488 1.7e-12 78.6 222 27.9
Oeu040314.1 Olea europaea HOM05D007234 ORTHO05D008488 2.2e-12 78.2 161 30.4
ClCG02G021720 Citrullus lanatus HOM05D007234 ORTHO05D008488 4.9e-12 77.0 178 29.8
Oeu049373.1 Olea europaea HOM05D007234 ORTHO05D008488 8.3e-12 76.3 257 24.9
PGSC0003DMG400041544 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.1e-11 75.9 185 29.2
ECA247G3092 Erigeron canadensis HOM05D007234 ORTHO05D008488 3.2e-11 74.3 250 25.2
PGSC0003DMG400047234 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.2e-11 74.3 241 27.0
Nitab4.5_0004686g0060 Nicotiana tabacum HOM05D013720 ORTHO05D011566 5.4e-11 73.6 120 33.3
Ca_12054_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.2e-10 72.4 249 27.7
PGSC0003DMG400042805 Solanum tuberosum HOM05D003150 ORTHO05D003532 1.2e-10 72.4 225 25.8
TPR.G8591 Trifolium pratense HOM05D005718 ORTHO05D004853 2.0e-10 71.6 231 26.8
PGSC0003DMG400041853 Solanum tuberosum HOM05D003150 ORTHO05D003532 2.7e-10 71.2 260 26.9
PGSC0003DMG400034750 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.5e-10 70.9 225 28.4
Nitab4.5_0000039g0070 Nicotiana tabacum HOM05D013720 ORTHO05D011566 4.6e-10 70.5 107 36.4
Nitab4.5_0000671g0180 Nicotiana tabacum HOM05D013720 ORTHO05D011566 7.8e-10 69.7 109 36.7
Ca_19825_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.3e-09 68.2 297 25.6
Oeu017565.1 Olea europaea HOM05D007234 ORTHO05D008488 2.3e-09 68.2 287 22.6
Ca_23989_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 3.0e-09 67.8 204 26.5
Oeu046272.1 Olea europaea HOM05D007234 ORTHO05D008488 3.0e-09 67.8 164 26.2
arahy.Tifrunner.gnm1.ann1.P0BLZN Arachis hypogaea HOM05D005718 ORTHO05D004853 3.9e-09 67.4 283 22.3
PGSC0003DMG400046799 Solanum tuberosum HOM05D003150 ORTHO05D003532 3.9e-09 67.4 225 27.6
Ca_14684_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.0e-09 67.0 205 25.9
PGSC0003DMG400039259 Solanum tuberosum HOM05D003150 ORTHO05D003532 5.0e-09 67.0 151 27.8
Ca_20053_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 6.6e-09 66.6 205 26.8
Ca_27659_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 6.6e-09 66.6 205 25.9
Nitab4.5_0003599g0020 Nicotiana tabacum HOM05D013720 ORTHO05D011566 1.1e-08 65.9 97 34.0
Oeu050318.1 Olea europaea HOM05D007234 ORTHO05D008488 1.1e-08 65.9 158 27.2
Ca_11946_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.5e-08 65.5 205 26.8
Ca_12186_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.5e-08 65.5 205 26.3
Gohir.D06G060950 Gossypium hirsutum HOM05D013638 ORTHO05D016332 1.5e-08 65.5 215 25.1
Ca_02735_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.9e-08 65.1 193 27.5
Nitab4.5_0006933g0050 Nicotiana tabacum HOM05D013720 ORTHO05D011566 1.9e-08 65.1 97 35.1
Ca_28538_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.5e-08 64.7 167 29.3
Ca_12947_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 3.3e-08 64.3 191 25.7
Phvul.003G065500 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 3.3e-08 64.3 309 22.0
Ca_20096_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 5.6e-08 63.5 167 29.3
Ca_02739_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 7.3e-08 63.2 187 26.7
Ca_27869_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 7.3e-08 63.2 205 26.3
Ca_28401_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 7.3e-08 63.2 177 26.6
Ca_28548_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 7.3e-08 63.2 177 26.6
Oeu052241.1 Olea europaea HOM05D007234 ORTHO05D008488 7.3e-08 63.2 180 28.3
TPR.G8598 Trifolium pratense HOM05D005718 ORTHO05D004853 7.3e-08 63.2 264 25.8
Medtr5g095310 Medicago truncatula HOM05D005718 ORTHO05D004853 9.5e-08 62.8 165 29.7
Ca_08870_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.2e-07 62.4 187 26.7
PGSC0003DMG400047302 Solanum tuberosum HOM05D000303 ORTHO05D000570 1.2e-07 62.4 195 27.2
Nitab4.5_0003835g0010 Nicotiana tabacum HOM05D011204 ORTHO05D011566 1.6e-07 62.0 76 38.2
Oeu017048.1 Olea europaea HOM05D007234 ORTHO05D008488 1.6e-07 62.0 158 27.2
Ca_03088_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.1e-07 61.6 187 26.2
VMungo0647G1817 Vigna mungo HOM05D009155 ORTHO05D004853 2.8e-07 61.2 155 25.8
Oeu055396.1 Olea europaea HOM05D007234 ORTHO05D008488 3.6e-07 60.8 260 24.2
Phvul.002G118700 Phaseolus vulgaris HOM05D009855 ORTHO05D010135 3.6e-07 60.8 196 25.0
Ca_05501_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 4.7e-07 60.5 164 26.8
Medtr4g027155 Medicago truncatula HOM05D045294 ORTHO05D004853 4.7e-07 60.5 193 26.4
VMungo0647G0491 Vigna mungo HOM05D009155 ORTHO05D004853 4.7e-07 60.5 190 26.8
Ca_14596_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 6.2e-07 60.1 152 28.3
Ca_24064_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 6.2e-07 60.1 163 26.4
Ca_26688_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 6.2e-07 60.1 272 23.9
Ca_13647_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 8.1e-07 59.7 288 23.6
Ca_19976_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 8.1e-07 59.7 232 25.4
Ca_20722_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 8.1e-07 59.7 187 25.1
Ca_01955_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.1e-06 59.3 275 24.4
Medtr7g070630 Medicago truncatula HOM05D012339 ORTHO05D004853 1.1e-06 59.3 144 31.9
Ca_26948_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.4e-06 58.9 169 26.0
Gohir.A13G112550 Gossypium hirsutum HOM05D013638 ORTHO05D016332 1.4e-06 58.9 160 25.0
Ca_02193_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 1.8e-06 58.5 190 25.3
Ca_20635_v3 Cicer arietinum L. HOM05D005718 ORTHO05D004853 2.3e-06 58.2 294 25.9
Oeu031407.1 Olea europaea HOM05D007234 ORTHO05D008488 2.3e-06 58.2 157 28.7
PGSC0003DMG400045531 Solanum tuberosum HOM05D000303 ORTHO05D000570 3.1e-06 57.8 158 25.3
MELO3C023733.2 Cucumis melo HOM05D008238 ORTHO05D010131 4.0e-06 57.4 177 23.2
Medtr5g079810 Medicago truncatula HOM05D012339 ORTHO05D004853 5.2e-06 57.0 145 31.0
VMungo0251G1225 Vigna mungo HOM05D000014 ORTHO05D000016 5.2e-06 57.0 175 25.1
TPR.G14209 Trifolium pratense HOM05D012339 ORTHO05D004853 8.9e-06 56.2 143 31.5
VMungo0251G0612 Vigna mungo HOM05D009155 ORTHO05D004853 8.9e-06 56.2 175 21.7


User provided reference genes

Program Settings