Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 1.1e-267 926.0 462 100.0
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 9.1e-201 703.7 441 81.0
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 3.8e-199 698.4 460 78.9
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 2.6e-192 675.6 434 78.3
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 3.5e-184 648.7 465 71.8
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 5.6e-158 561.6 436 67.0
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 2.3e-156 556.2 439 63.3
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 5.8e-155 551.6 439 64.5
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.4e-153 547.0 440 64.5
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 9.2e-153 544.3 439 65.1
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 1.6e-152 543.5 416 64.7
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 2.0e-152 543.1 439 61.0
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 1.1e-150 537.3 433 62.8
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 2.5e-150 536.2 438 63.0
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 1.6e-149 533.5 435 62.8
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.6e-149 533.5 438 62.6
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 3.6e-149 532.3 432 63.0
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 2.3e-148 529.6 430 61.4
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.6e-147 526.2 428 63.1
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 2.6e-147 526.2 417 63.5
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 3.7e-146 522.3 430 62.1
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 1.1e-145 520.8 431 61.9
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 2.4e-145 519.6 447 58.6
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 2.1e-144 516.5 428 61.4
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 6.0e-144 515.0 433 61.0
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 7.8e-144 514.6 434 60.1
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 1.0e-143 514.2 433 61.0
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 3.0e-143 512.7 419 62.8
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 3.9e-143 512.3 434 60.4
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 5.6e-142 508.4 438 58.4
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 1.2e-141 507.3 445 59.1
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 1.2e-141 507.3 412 61.4
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 1.6e-141 506.9 438 59.4
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 2.1e-141 506.5 433 59.4
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 2.1e-141 506.5 439 58.1
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 3.6e-141 505.8 431 59.6
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 1.4e-140 503.8 434 58.8
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 1.8e-140 503.4 434 59.4
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 5.2e-140 501.9 439 57.6
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 2.9e-138 496.1 432 57.9
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 8.4e-138 494.6 439 56.9
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 5.4e-137 491.9 413 58.4
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 4.6e-136 488.8 435 57.2
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 6.0e-136 488.4 404 60.4
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 1.0e-135 487.6 433 55.4
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 1.0e-135 487.6 445 56.4
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 1.3e-135 487.3 437 59.0
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 3.0e-135 486.1 433 57.0
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 3.0e-135 486.1 433 57.7
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 6.6e-135 485.0 433 57.7
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 1.1e-134 484.2 441 55.8
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 5.6e-134 481.9 433 57.3
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 5.6e-134 481.9 410 59.5
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 7.3e-134 481.5 409 58.4
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 3.6e-133 479.2 444 56.3
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 6.2e-133 478.4 429 57.1
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 3.1e-132 476.1 429 57.3
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 5.2e-132 475.3 434 56.7
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 3.4e-131 472.6 437 57.0
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 5.8e-131 471.9 422 57.8
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 3.2e-129 466.1 440 56.4
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 9.3e-129 464.5 453 54.5
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 1.6e-128 463.8 440 56.1
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 1.6e-128 463.8 440 56.1
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 3.5e-128 462.6 423 57.9
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 1.0e-127 461.1 449 56.1
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 1.7e-127 460.3 401 59.1
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 8.7e-127 458.0 439 54.9
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.3e-126 456.1 428 55.6
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 9.6e-126 454.5 407 58.7
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 1.3e-125 454.1 423 54.6
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 1.3e-125 454.1 413 58.6
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 8.1e-125 451.4 477 52.0
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 1.7e-122 443.7 433 52.7
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 8.4e-122 441.4 370 59.7
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 1.4e-121 440.7 423 53.9
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 5.4e-121 438.7 286 71.7
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 1.2e-120 437.6 405 54.6
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 1.8e-119 433.7 296 68.9
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 6.7e-119 431.8 423 51.5
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.1e-118 431.0 298 68.8
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 1.3e-117 427.6 415 51.6
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 1.6e-112 410.6 289 67.8
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 3.5e-112 409.5 303 63.7
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 6.7e-111 405.2 300 64.3
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 3.2e-105 386.3 427 47.5
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 7.2e-97 358.6 297 57.2
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 6.5e-90 335.5 250 66.8
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 6.7e-87 325.5 311 57.2
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 1.6e-80 304.3 403 44.2
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 9.4e-73 278.5 280 52.5
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 1.5e-70 271.2 309 48.2
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 2.0e-70 270.8 316 47.5
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 7.5e-70 268.9 285 51.6
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 9.7e-70 268.5 215 62.8
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 6.8e-63 245.7 158 72.8
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 5.7e-62 242.7 409 36.4
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 7.5e-62 242.3 201 57.2
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 1.6e-43 181.4 203 49.8
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 9.5e-41 172.2 144 63.2
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.1e-39 167.2 152 57.2
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 1.4e-36 158.3 429 29.1
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 3.3e-33 147.1 136 52.9
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.0e-26 124.0 94 67.0
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 1.2e-24 118.6 100 63.0
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 1.5e-22 111.7 74 68.9
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 7.1e-20 102.8 87 55.2
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 5.6e-17 93.2 73 64.4
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 6.2e-16 89.7 70 67.1
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 9.9e-14 82.4 385 27.3
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 3.8e-13 80.5 388 23.7
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 6.4e-13 79.7 80 48.8
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 1.9e-12 78.2 71 47.9
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 9.3e-12 75.9 58 63.8
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 3.5e-11 73.9 241 27.8
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 3.3e-09 67.4 226 29.6
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 5.3e-07 60.1 110 30.0
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 6.9e-07 59.7 66 48.5


User provided reference genes

Program Settings