Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008137g0040 Nicotiana tabacum HOM05D006024 ORTHO05D007505 9.6e-147 523.5 265 100.0
Nitab4.5_0003796g0050 Nicotiana tabacum HOM05D006024 ORTHO05D007505 9.7e-131 470.3 349 74.5
Peaxi162Scf00559g00415 Petunia axillaris HOM05D006024 ORTHO05D007505 8.2e-122 440.7 349 70.2
Sopen01g002620 Solanum pennellii HOM05D006024 ORTHO05D007505 3.8e-119 431.8 359 67.1
Solyc01g006630.3 Solanum lycopersicum HOM05D006024 ORTHO05D007505 8.5e-119 430.6 359 67.1
CAN.G388.68 Capsicum annuum HOM05D006024 ORTHO05D007505 1.1e-105 387.1 391 58.3
Cc01_g04140 Coffea canephora HOM05D006024 ORTHO05D007505 5.9e-96 354.8 359 56.0
Oeu042179.3 Olea europaea HOM05D006024 ORTHO05D007505 1.9e-94 349.7 356 55.1
GSVIVG01025335001 Vitis vinifera HOM05D006024 ORTHO05D007505 2.5e-94 349.4 356 55.1
CSS0019947 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 2.8e-93 345.9 349 55.3
CSS0045029 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 2.8e-93 345.9 349 55.3
MSTRG.21409 Avicennia marina HOM05D006024 ORTHO05D007505 5.7e-91 338.2 362 54.4
Hma1.2p1_2304F.1_g319350 Hydrangea macrophylla HOM05D006024 ORTHO05D007505 9.8e-91 337.4 359 53.8
CiPaw.13G165500 Carya illinoinensis HOM05D006024 ORTHO05D007505 2.4e-89 332.8 355 53.8
Aqoxy1G00184 Aquilegia oxysepala HOM05D006024 ORTHO05D007505 1.6e-88 330.1 359 53.2
Cpa.g.sc84.110 Carica papaya HOM05D006024 ORTHO05D007505 1.6e-88 330.1 355 51.8
DCAR_002037 Daucus carota HOM05D006024 ORTHO05D007505 3.5e-88 328.9 352 52.0
Potri.003G210900 Populus trichocarpa HOM05D006024 ORTHO05D007505 5.9e-88 328.2 358 51.1
Potri.T085501 Populus trichocarpa HOM05D006024 ORTHO05D007505 7.8e-88 327.8 359 51.0
Sed0023125 Sechium edule HOM05D006024 ORTHO05D007505 1.3e-87 327.0 355 53.0
FAN11G3540 Fragaria x ananassa HOM05D006024 ORTHO05D007505 1.7e-87 326.6 356 52.5
MD11G1022800 Malus domestica HOM05D006024 ORTHO05D007505 2.9e-87 325.9 356 52.8
BcaB06g26149 Brassica carinata HOM05D006024 ORTHO05D007505 3.9e-87 325.5 350 52.0
Atru.chr3.2505 Acer truncatum HOM05D006024 ORTHO05D007505 6.6e-87 324.7 364 51.6
CANSAT54G0336 Cannabis sativa HOM05D006024 ORTHO05D007505 8.6e-87 324.3 361 51.8
Prupe.6G018500 Prunus persica HOM05D006024 ORTHO05D007505 1.1e-86 323.9 357 51.3
COL.COLO4_09894 Corchorus olitorius HOM05D006024 ORTHO05D007505 1.5e-86 323.6 350 51.7
RcHm_v2.0_Chr5g0078111 Rosa chinensis HOM05D006024 ORTHO05D007505 3.3e-86 322.4 359 52.4
PSO339G6331 Papaver somniferum HOM05D006024 ORTHO05D007505 4.3e-86 322.0 360 49.7
BcaC05g28281 Brassica carinata HOM05D006024 ORTHO05D007505 9.5e-86 320.9 350 51.1
Migut.D00559 Erythranthe guttata HOM05D006024 ORTHO05D007505 9.5e-86 320.9 340 53.8
BraA05t21682Z Brassica rapa HOM05D006024 ORTHO05D007505 2.1e-85 319.7 349 51.6
Ciclev10015756m.g Citrus clementina HOM05D006024 ORTHO05D007505 2.1e-85 319.7 354 52.8
FvH4_3g43551 Fragaria vesca HOM05D006024 ORTHO05D007505 2.1e-85 319.7 359 51.5
BolC5t33061H Brassica oleracea HOM05D006024 ORTHO05D007505 2.8e-85 319.3 349 51.6
A05p27990 Brassica napus HOM05D006024 ORTHO05D007505 3.6e-85 318.9 356 50.8
Nn7g36060 Nelumbo nucifera HOM05D006024 ORTHO05D007505 3.6e-85 318.9 356 51.1
AUR62019251 Chenopodium quinoa HOM05D006024 ORTHO05D007505 4.7e-85 318.5 338 53.3
C05p43290 Brassica napus HOM05D006024 ORTHO05D007505 6.1e-85 318.2 348 51.4
Duzib168G0763 Durio zibethinus HOM05D006024 ORTHO05D007505 6.1e-85 318.2 350 52.0
Gohir.D06G112300 Gossypium hirsutum HOM05D006024 ORTHO05D007505 6.1e-85 318.2 357 51.3
Gorai.010G128200 Gossypium raimondii HOM05D006024 ORTHO05D007505 6.1e-85 318.2 357 51.3
Thecc.09G223300 Theobroma cacao HOM05D006024 ORTHO05D007505 6.1e-85 318.2 356 51.4
TWI60G1552 Tripterygium wilfordii HOM05D006024 ORTHO05D007505 6.1e-85 318.2 356 51.7
Cfa009695 Carpinus fangiana HOM05D006024 ORTHO05D007505 8.0e-85 317.8 360 50.6
QL01p006224 Quercus lobata HOM05D006024 ORTHO05D007505 1.0e-84 317.4 385 49.1
MSTRG.12483 Avicennia marina HOM05D006024 ORTHO05D007505 1.4e-84 317.0 356 50.0
CsaV3_4G023790 Cucumis sativus L. HOM05D006024 ORTHO05D007505 1.8e-84 316.6 355 51.0
AUR62000078 Chenopodium quinoa HOM05D006024 ORTHO05D007505 3.1e-84 315.8 338 53.3
MELO3C014640.2 Cucumis melo HOM05D006024 ORTHO05D007505 3.1e-84 315.8 356 50.3
Lsat_1_v5_gn_6_50101 Lactuca sativa HOM05D006024 ORTHO05D007505 4.0e-84 315.5 356 51.4
Manes.14G014400 Manihot esculenta HOM05D006024 ORTHO05D007505 5.2e-84 315.1 357 50.7
PGR119G1295 Punica granatum HOM05D006024 ORTHO05D007505 8.9e-84 314.3 355 50.4
Sp3g18810 Schrenkiella parvula HOM05D006024 ORTHO05D007505 1.2e-83 313.9 356 49.7
Eucgr.J00813 Eucalyptus grandis HOM05D006024 ORTHO05D007505 5.8e-83 311.6 355 50.1
AL3G34710 Arabidopsis lyrata HOM05D006024 ORTHO05D007505 1.7e-82 310.1 350 50.3
Hund22080 Selenicereus undatus HOM05D006024 ORTHO05D007505 1.7e-82 310.1 343 51.9
AT3G20790 Arabidopsis thaliana HOM05D006024 ORTHO05D007505 2.9e-82 309.3 356 49.2
Thhalv10021019m.g Eutrema salsugineum HOM05D006024 ORTHO05D007505 2.9e-82 309.3 357 48.7
HanXRQChr02g0056471 Helianthus annuus HOM05D006024 ORTHO05D007505 3.7e-82 308.9 357 51.0
THA.LOC104816910 Tarenaya hassleriana HOM05D006024 ORTHO05D007505 6.4e-82 308.1 352 49.4
CARHR096620 Cardamine hirsuta HOM05D006024 ORTHO05D007505 8.3e-82 307.8 351 49.9
Glyma.13G342800 Glycine max HOM05D006024 ORTHO05D007505 1.1e-81 307.4 362 49.7
Phvul.005G150400 Phaseolus vulgaris HOM05D006024 ORTHO05D007505 1.1e-81 307.4 359 51.0
Carub.0003s2075 Capsella rubella HOM05D006024 ORTHO05D007505 5.4e-81 305.1 351 49.6
Lj4g0026168 Lotus japonicus HOM05D006024 ORTHO05D007505 9.2e-81 304.3 360 49.4
FAN11G0987 Fragaria x ananassa HOM05D006024 ORTHO05D007505 3.5e-80 302.4 339 51.6
Lj3g0007180 Lotus japonicus HOM05D006024 ORTHO05D007505 7.8e-80 301.2 360 49.2
arahy.Tifrunner.gnm1.ann1.7L1RE9 Arachis hypogaea HOM05D006024 ORTHO05D007505 1.7e-79 300.1 354 49.7
Migut.N02293 Erythranthe guttata HOM05D006024 ORTHO05D007505 3.9e-79 298.9 358 48.6
Ca_01271_v3 Cicer arietinum L. HOM05D006024 ORTHO05D007505 1.1e-78 297.4 363 49.3
VMungo1080G1755 Vigna mungo HOM05D004763 ORTHO05D007492 3.3e-78 295.8 359 49.3
TPR.G18832 Trifolium pratense HOM05D006024 ORTHO05D007505 4.3e-78 295.4 364 49.7
Lalb_Chr24g0396941 Lupinus albus HOM05D006024 ORTHO05D007505 1.6e-77 293.5 356 48.9
EL10Ac4g10317 Beta vulgaris HOM05D006024 ORTHO05D007505 4.0e-76 288.9 344 48.5
Os09g0280300 Oryza sativa ssp. japonica HOM05D006024 ORTHO05D007505 4.0e-76 288.9 360 45.8
Gohir.A06G108500 Gossypium hirsutum HOM05D006024 ORTHO05D007505 5.2e-76 288.5 339 50.1
Dinv36303 Davidia involucrata HOM05D006024 ORTHO05D007505 7.5e-75 284.6 295 53.9
arahy.Tifrunner.gnm1.ann1.3AB71G Arachis hypogaea HOM05D006024 ORTHO05D007505 1.7e-74 283.5 324 50.9
Medtr2g098500 Medicago truncatula HOM05D006024 ORTHO05D007505 4.9e-74 282.0 354 48.6
Aa31LG8G7600 Aethionema arabicum HOM05D006024 ORTHO05D007505 9.2e-73 277.7 345 47.5
VMungo0251G0909 Vigna mungo HOM05D006024 ORTHO05D007505 2.1e-72 276.6 359 46.8
VMungo1080G1390 Vigna mungo HOM05D006024 ORTHO05D007505 2.5e-70 269.6 359 45.1
ATR0605G294 Amborella trichopoda HOM05D006024 ORTHO05D007505 5.6e-70 268.5 360 43.9
SGA_v2.0_scaffold1G00800 Striga asiatica HOM05D006024 ORTHO05D007505 8.1e-69 264.6 331 49.2
MBI04_g27131_MAGBIO Magnolia biondii HOM05D006024 ORTHO05D007505 2.2e-66 256.5 357 43.4
Lj1A365G18 Lonicera japonica HOM05D006024 ORTHO05D007505 6.4e-66 255.0 372 43.8
Lju1319A3G40 Lonicera japonica HOM05D006024 ORTHO05D007505 5.4e-65 251.9 347 45.2
SEGI_39854 Sequoiadendron giganteum HOM05D006024 ORTHO05D007505 7.1e-65 251.5 355 42.3
vmacro04169 Vaccinium macrocarpon HOM05D006024 ORTHO05D007505 7.1e-65 251.5 473 37.4
Zm00001eb094580 Zea mays HOM05D006024 ORTHO05D007505 2.6e-59 233.0 205 57.1
Haze_23046 Corylus avellana HOM05D006024 ORTHO05D007505 8.4e-58 228.0 158 70.3
unitig_8.g3081 Utricularia gibba HOM05D006024 ORTHO05D007505 2.8e-53 213.0 356 39.6
FAN16G2307 Fragaria x ananassa HOM05D006024 ORTHO05D007505 4.0e-52 209.1 142 73.2
SMO116G0160 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 7.1e-49 198.4 344 36.0
Pp3c6_24290 Physcomitrium patens HOM05D006024 ORTHO05D007505 9.3e-49 198.0 351 34.8
Mapoly0150s0011 Marchantia polymorpha HOM05D006024 ORTHO05D007505 1.1e-46 191.0 357 34.5
Rhsim13G0225400 Rhododendron simsii HOM05D006024 ORTHO05D007505 2.5e-46 189.9 248 44.4
Pp3c16_13070 Physcomitrium patens HOM05D006024 ORTHO05D007505 2.6e-43 179.9 374 32.9
AagrBONN_evm.TU.Sc2ySwM_344.3372 Anthoceros agrestis HOM05D006024 ORTHO05D007505 1.1e-41 174.5 358 33.5
TAR636G0774 Trochodendron aralioides HOM05D006024 ORTHO05D007505 2.4e-41 173.3 267 39.3
ECA233G0904 Erigeron canadensis HOM05D006024 ORTHO05D007505 6.0e-40 168.7 254 40.9
Sc06g0004470 Simmondsia chinensis HOM05D006024 ORTHO05D007505 1.1e-38 164.5 255 39.6
Sc06g0004480 Simmondsia chinensis HOM05D006024 ORTHO05D007505 1.4e-36 157.5 99 76.8
SMO146G0097 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 2.0e-35 153.7 336 31.0
AagrBONN_evm.TU.Sc2ySwM_344.254 Anthoceros agrestis HOM05D006024 ORTHO05D007505 7.1e-33 145.2 354 30.2
SMO144G0113 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 7.1e-33 145.2 336 31.5
Pp3c3_20310 Physcomitrium patens HOM05D006024 ORTHO05D007505 2.1e-32 143.7 300 33.3
HPP92_000457 Vanilla planifolia HOM05D006024 ORTHO05D007505 7.9e-32 141.7 124 60.5
Mapoly0033s0066 Marchantia polymorpha HOM05D006024 ORTHO05D007505 1.8e-31 140.6 352 31.5
ECA233G1997 Erigeron canadensis HOM05D006024 ORTHO05D007505 6.7e-31 138.7 98 69.4
TAR636G1381 Trochodendron aralioides HOM05D006024 ORTHO05D007505 3.7e-29 132.9 154 50.0
Psat5g288680 Pisum sativum HOM05D006024 ORTHO05D007505 8.2e-29 131.7 100 68.0
Rhsim13G0225300 Rhododendron simsii HOM05D006024 ORTHO05D007505 2.4e-28 130.2 83 75.9
ClCG02G023630 Citrullus lanatus HOM05D006024 ORTHO05D007505 3.3e-22 109.8 169 40.2
CSS0042824 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 3.4e-19 99.8 83 63.9
CSS0049558 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 4.5e-19 99.4 82 64.6
FAN25G0441 Fragaria x ananassa HOM05D006024 ORTHO05D007505 7.7e-19 98.6 127 44.9
Psat7g086040 Pisum sativum HOM05D006024 ORTHO05D007505 8.5e-18 95.1 146 40.4
CSS0043067 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 1.1e-14 84.7 79 57.0
Cre01.g023300 Chlamydomonas reinhardtii HOM05D006024 ORTHO05D007505 1.7e-13 80.9 208 32.2
Medtr8g016390 Medicago truncatula HOM05D006024 ORTHO05D007505 6.3e-13 79.0 96 49.0
Actinidia16298 Actinidia chinensis HOM05D006024 ORTHO05D007505 1.1e-12 78.2 54 63.0
C01p43430 Brassica napus HOM05D006024 ORTHO05D007505 2.4e-12 77.0 102 46.1
BolC1t04302H Brassica oleracea HOM05D006024 ORTHO05D007505 2.4e-12 77.0 102 46.1
Psat6g204000 Pisum sativum HOM05D006024 ORTHO05D007505 2.9e-10 70.1 84 52.4
Psat5g288640 Pisum sativum HOM05D006024 ORTHO05D007505 1.0e-07 61.6 106 39.6
Cfa023900 Carpinus fangiana HOM05D006024 ORTHO05D007505 8.8e-07 58.5 207 29.5
BcaC09g49021 Brassica carinata HOM05D006024 ORTHO05D007505 7.4e-06 55.5 87 44.8


User provided reference genes

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