Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008118g0020 Nicotiana tabacum HOM05D007633 ORTHO05D008817 1.6e-135 486.1 248 100.0
Nitab4.5_0000321g0150 Nicotiana tabacum HOM05D007633 ORTHO05D008817 1.2e-101 373.6 252 80.2
Peaxi162Scf00192g01119 Petunia axillaris HOM05D007633 ORTHO05D008817 4.3e-72 275.4 246 63.4
Nitab4.5_0001342g0010 Nicotiana tabacum HOM05D007633 ORTHO05D008817 8.9e-70 267.7 244 58.6
Solyc09g082160.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 1.3e-68 263.8 246 59.3
Sopen09g031040 Solanum pennellii HOM05D007633 ORTHO05D008817 1.3e-68 263.8 246 59.3
PGSC0003DMG400032254 Solanum tuberosum HOM05D007633 ORTHO05D008817 3.7e-68 262.3 229 61.6
Sopen06g019290 Solanum pennellii HOM05D007633 ORTHO05D008817 1.1e-67 260.8 173 75.1
Solyc06g054140.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 4.1e-67 258.8 183 71.6
Peaxi162Scf00092g00615 Petunia axillaris HOM05D007633 ORTHO05D008817 9.9e-61 237.7 248 54.8
Nitab4.5_0001920g0040 Nicotiana tabacum HOM05D007633 ORTHO05D008817 1.6e-50 203.8 196 57.7
Hma1.2p1_0745F.1_g212150 Hydrangea macrophylla HOM05D007633 ORTHO05D008817 2.5e-48 196.4 240 45.4
CSS0018565 Camellia sinensis var. sinensis HOM05D007633 ORTHO05D008817 1.3e-47 194.1 240 43.3
Oeu011618.1 Olea europaea HOM05D007633 ORTHO05D008817 1.9e-43 180.3 245 42.4
Dinv14003 Davidia involucrata HOM05D007633 ORTHO05D008817 7.1e-43 178.3 227 41.4
FAN02G3335 Fragaria x ananassa HOM05D007633 ORTHO05D008817 4.6e-42 175.6 264 36.7
Cc03_g03920 Coffea canephora HOM05D007633 ORTHO05D008817 1.8e-41 173.7 248 41.5
Actinidia36954 Actinidia chinensis HOM05D007633 ORTHO05D008817 6.7e-41 171.8 240 39.2
MSTRG.21860 Avicennia marina HOM05D007633 ORTHO05D008817 8.7e-41 171.4 256 39.8
Cfa015662 Carpinus fangiana HOM05D007633 ORTHO05D008817 8.7e-41 171.4 265 37.4
FAN22G0362 Fragaria x ananassa HOM05D007633 ORTHO05D008817 9.6e-40 167.9 264 35.6
Potri.008G154200 Populus trichocarpa HOM05D007633 ORTHO05D008817 9.6e-40 167.9 241 39.4
RcHm_v2.0_Chr4g0415951 Rosa chinensis HOM05D007633 ORTHO05D008817 1.8e-38 163.7 260 34.6
Haze_00885 Corylus avellana HOM05D007633 ORTHO05D008817 6.9e-38 161.8 265 35.5
TAR636G0739 Trochodendron aralioides HOM05D007633 ORTHO05D008817 6.9e-38 161.8 240 37.9
Nn1g02349 Nelumbo nucifera HOM05D007633 ORTHO05D008817 1.5e-37 160.6 244 37.7
Potri.010G086300 Populus trichocarpa HOM05D007633 ORTHO05D008817 5.8e-37 158.7 241 37.8
Rhsim02G0025900 Rhododendron simsii HOM05D007633 ORTHO05D008817 1.7e-36 157.1 227 37.4
Eucgr.H03451 Eucalyptus grandis HOM05D007633 ORTHO05D008817 8.4e-36 154.8 268 34.3
FvH4_4g16290 Fragaria vesca HOM05D007633 ORTHO05D008817 8.4e-36 154.8 264 34.5
FAN12G0707 Fragaria x ananassa HOM05D007633 ORTHO05D008817 8.4e-36 154.8 264 34.5
Manes.03G177200 Manihot esculenta HOM05D007633 ORTHO05D008817 1.4e-35 154.1 246 34.6
QL06p002095 Quercus lobata HOM05D007633 ORTHO05D008817 7.1e-35 151.8 264 34.8
Gohir.A09G053600 Gossypium hirsutum HOM05D007633 ORTHO05D008817 2.1e-34 150.2 249 37.3
PGSC0003DMG400016306 Solanum tuberosum HOM05D007633 ORTHO05D008817 2.1e-34 150.2 102 74.5
Thecc.04G233700 Theobroma cacao HOM05D007633 ORTHO05D008817 3.5e-34 149.4 245 36.3
Glyma.11G006100 Glycine max HOM05D007633 ORTHO05D008817 7.9e-34 148.3 256 34.0
Glyma.01G237200 Glycine max HOM05D007633 ORTHO05D008817 1.0e-33 147.9 247 35.2
Ciclev10005651m.g Citrus clementina HOM05D007633 ORTHO05D008817 1.3e-33 147.5 255 32.9
Medtr5g006410 Medicago truncatula HOM05D007633 ORTHO05D008817 5.1e-33 145.6 261 33.7
LjContig00408g0001251 Lotus japonicus HOM05D007633 ORTHO05D008817 1.1e-32 144.4 269 32.0
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 1.5e-32 144.1 255 33.3
Atru.chr4.2449 Acer truncatum HOM05D007633 ORTHO05D008817 2.5e-32 143.3 254 32.7
HanXRQChr02g0035611 Helianthus annuus HOM05D007633 ORTHO05D008817 3.3e-32 142.9 222 37.4
PSO210G0191 Papaver somniferum HOM05D007633 ORTHO05D008817 5.6e-32 142.1 244 36.1
Gorai.006G055000 Gossypium raimondii HOM05D007633 ORTHO05D008817 1.3e-31 141.0 255 36.9
SalBow3G0862 Salvia bowleyana HOM05D007633 ORTHO05D008817 2.1e-31 140.2 243 36.2
Gohir.D09G053050 Gossypium hirsutum HOM05D007633 ORTHO05D008817 3.7e-31 139.4 249 36.9
GSVIVG01017995001 Vitis vinifera HOM05D007633 ORTHO05D008817 6.2e-31 138.7 241 34.4
Migut.N00191 Erythranthe guttata HOM05D007633 ORTHO05D008817 1.1e-30 137.9 229 34.9
PGR004G0463 Punica granatum HOM05D007633 ORTHO05D008817 1.8e-30 137.1 239 34.3
ECA240G3784 Erigeron canadensis HOM05D000137 ORTHO05D000452 2.4e-30 136.7 209 39.2
Prupe.1G015500 Prunus persica HOM05D007633 ORTHO05D008817 5.3e-30 135.6 161 41.6
Sabra10G0057400 Salix brachista HOM05D007633 ORTHO05D008817 6.9e-30 135.2 229 33.6
CANSAT78G1135 Cannabis sativa HOM05D007633 ORTHO05D008817 3.4e-29 132.9 256 31.6
MD16G1195500 Malus domestica HOM05D007633 ORTHO05D008817 4.5e-29 132.5 244 34.4
PSO761G0330 Papaver somniferum HOM05D007633 ORTHO05D008817 5.8e-29 132.1 236 36.0
vmacro15349 Vaccinium macrocarpon HOM05D007633 ORTHO05D008817 7.6e-29 131.7 236 34.3
Aqoxy2G03409 Aquilegia oxysepala HOM05D007633 ORTHO05D008817 1.0e-28 131.3 228 35.5
Ca_24403_v3 Cicer arietinum L. HOM05D007633 ORTHO05D008817 2.2e-28 130.2 241 31.5
TPR.G38043 Trifolium pratense HOM05D007633 ORTHO05D008817 8.4e-28 128.3 255 31.0
TWI73G0352 Tripterygium wilfordii HOM05D007633 ORTHO05D008817 8.4e-28 128.3 256 32.0
FAN07G1430 Fragaria x ananassa HOM05D007633 ORTHO05D008817 1.4e-27 127.5 207 36.7
MELO3C006526.2 Cucumis melo HOM05D007633 ORTHO05D008817 1.9e-27 127.1 256 34.4
Psat4g209480 Pisum sativum HOM05D007633 ORTHO05D008817 1.9e-27 127.1 287 30.0
CiPaw.01G167500 Carya illinoinensis HOM05D007633 ORTHO05D008817 2.5e-27 126.7 251 33.1
Lalb_Chr01g0013131 Lupinus albus HOM05D007633 ORTHO05D008817 4.2e-27 125.9 260 32.7
Phvul.002G044600 Phaseolus vulgaris HOM05D007633 ORTHO05D008817 2.1e-26 123.6 254 33.5
ATR0697G107 Amborella trichopoda HOM05D007633 ORTHO05D008817 2.7e-26 123.2 238 36.1
PSO761G0485 Papaver somniferum HOM05D007633 ORTHO05D008817 3.0e-25 119.8 236 33.1
CsaV3_3G013230 Cucumis sativus L. HOM05D007633 ORTHO05D008817 3.9e-25 119.4 255 32.5
Ah.04g154590 Amaranthus hybridus HOM05D007633 ORTHO05D008817 1.1e-24 117.9 253 32.0
Sed0010969 Sechium edule HOM05D007633 ORTHO05D008817 1.5e-24 117.5 219 32.4
PSO210G6592 Papaver somniferum HOM05D007633 ORTHO05D008817 3.3e-24 116.3 236 33.5
Hund12119 Selenicereus undatus HOM05D007633 ORTHO05D008817 1.3e-23 114.4 209 31.6
Lsat_1_v5_gn_7_64401 Lactuca sativa HOM05D007633 ORTHO05D008817 1.6e-23 114.0 215 34.9
VMungo1215G1793 Vigna mungo HOM05D007633 ORTHO05D008817 8.2e-23 111.7 261 31.4
Duzib212G0599 Durio zibethinus HOM05D007633 ORTHO05D008817 2.4e-22 110.2 165 39.4
HPP92_006116 Vanilla planifolia HOM05D007633 ORTHO05D008817 1.1e-19 101.3 244 30.7
AUR62034710 Chenopodium quinoa HOM05D007633 ORTHO05D008817 2.0e-16 90.5 191 29.8
VMungo1215G1192 Vigna mungo HOM05D007633 ORTHO05D008817 2.5e-16 90.1 278 30.2
Lsat_1_v5_gn_8_155361 Lactuca sativa HOM05D007633 ORTHO05D008817 5.7e-16 89.0 134 37.3
CDE07G1037 Ceratophyllum demersum HOM05D007633 ORTHO05D008817 7.4e-16 88.6 147 35.4
THA.LOC104826165 Tarenaya hassleriana HOM05D012198 ORTHO05D008817 7.4e-16 88.6 253 30.4
AUR62043551 Chenopodium quinoa HOM05D007633 ORTHO05D008817 1.7e-15 87.4 191 29.8
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 6.9e-14 82.0 259 27.8
SEGI_17234 Sequoiadendron giganteum HOM05D007633 ORTHO05D008817 2.0e-13 80.5 155 35.5
ClCG05G005110 Citrullus lanatus HOM05D007633 ORTHO05D008817 2.9e-12 76.6 259 26.6
Carub.0001s0476 Capsella rubella HOM05D012198 ORTHO05D008817 1.2e-10 71.2 263 30.0
EL10Ac3g06495 Beta vulgaris HOM05D007633 ORTHO05D008817 4.7e-10 69.3 250 26.4
AT1G05430 Arabidopsis thaliana HOM05D012198 ORTHO05D008817 1.0e-09 68.2 235 30.2
arahy.Tifrunner.gnm1.ann1.5LNY8Z Arachis hypogaea HOM05D007633 ORTHO05D008817 2.3e-09 67.0 177 29.9
arahy.Tifrunner.gnm1.ann1.VQRK5I Arachis hypogaea HOM05D007633 ORTHO05D008817 2.3e-09 67.0 176 29.5
MD13G1194600 Malus domestica HOM05D007633 ORTHO05D008817 1.1e-08 64.7 155 29.0
CARHR205340 Cardamine hirsuta HOM05D012198 ORTHO05D008817 4.4e-08 62.8 258 27.9
AL1G15270 Arabidopsis lyrata HOM05D012198 ORTHO05D008817 9.7e-08 61.6 237 29.5
Sp1g04300 Schrenkiella parvula HOM05D012198 ORTHO05D008817 2.2e-07 60.5 250 26.0
Os10g0430700 Oryza sativa ssp. japonica HOM05D026697 ORTHO05D008817 2.8e-07 60.1 243 26.3
Thhalv10008449m.g Eutrema salsugineum HOM05D012198 ORTHO05D008817 1.4e-06 57.8 262 25.6
Zm00001eb222870 Zea mays HOM05D026697 ORTHO05D008817 1.8e-06 57.4 191 27.2
Os10g0430800 Oryza sativa ssp. japonica HOM05D026697 ORTHO05D008817 2.4e-06 57.0 240 25.0
BcaB02g06861 Brassica carinata HOM05D012198 ORTHO05D008817 3.1e-06 56.6 227 28.6
DCAR_030642 Daucus carota HOM05D007633 ORTHO05D008817 7.0e-06 55.5 122 29.5


User provided reference genes

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