Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008100g0010 Nicotiana tabacum HOM05D001787 ORTHO05D003488 8.1e-41 169.9 79 100.0
Nitab4.5_0007033g0020 Nicotiana tabacum HOM05D001787 ORTHO05D003488 9.9e-31 136.3 73 90.4
PGSC0003DMG402005180 Solanum tuberosum HOM05D001787 ORTHO05D003488 1.6e-25 119.0 72 76.4
Sopen06g023400 Solanum pennellii HOM05D001787 ORTHO05D003488 3.1e-24 114.8 71 74.6
CAN.G308.25 Capsicum annuum HOM05D001787 ORTHO05D003488 4.0e-24 114.4 71 71.8
Peaxi162Scf00269g01519 Petunia axillaris HOM05D001787 ORTHO05D003488 5.2e-24 114.0 71 74.6
Nitab4.5_0000293g0070 Nicotiana tabacum HOM05D001787 ORTHO05D003488 1.5e-23 112.5 71 78.9
Solyc06g064880.3 Solanum lycopersicum HOM05D001787 ORTHO05D003488 4.4e-23 110.9 69 73.9
CSS0046300 Camellia sinensis var. sinensis HOM05D001787 ORTHO05D003488 4.2e-21 104.4 73 67.1
Hma1.2p1_0496F.1_g166180 Hydrangea macrophylla HOM05D001787 ORTHO05D003488 5.4e-21 104.0 67 68.7
Actinidia32179 Actinidia chinensis HOM05D001787 ORTHO05D003488 1.2e-20 102.8 73 61.6
Migut.I01064 Erythranthe guttata HOM05D001787 ORTHO05D003488 2.7e-20 101.7 68 64.7
Nitab4.5_0005772g0070 Nicotiana tabacum HOM05D001787 ORTHO05D003488 3.5e-20 101.3 70 67.1
COL.COLO4_09123 Corchorus olitorius HOM05D001787 ORTHO05D003488 4.6e-20 100.9 68 64.7
Nitab4.5_0003440g0050 Nicotiana tabacum HOM05D001787 ORTHO05D003488 7.8e-20 100.1 82 61.0
Prupe.3G043200 Prunus persica HOM05D001787 ORTHO05D003488 1.3e-19 99.4 73 60.3
Thecc.06G118500 Theobroma cacao HOM05D001787 ORTHO05D003488 1.3e-19 99.4 67 65.7
Dinv04033 Davidia involucrata HOM05D001787 ORTHO05D003488 2.3e-19 98.6 66 66.7
PSO421G0511 Papaver somniferum HOM05D001787 ORTHO05D003488 2.3e-19 98.6 70 60.0
TAR383G0339 Trochodendron aralioides HOM05D001787 ORTHO05D003488 2.3e-19 98.6 71 59.2
PSO063G0122 Papaver somniferum HOM05D001787 ORTHO05D003488 3.9e-19 97.8 70 61.4
CiPaw.01G220200 Carya illinoinensis HOM05D001787 ORTHO05D003488 5.1e-19 97.4 70 61.4
COL.COLO4_32329 Corchorus olitorius HOM05D001787 ORTHO05D003488 1.6e-17 92.4 68 61.8
Atru.chr1.3910 Acer truncatum HOM05D001787 ORTHO05D003488 2.1e-17 92.0 73 57.5
QL10p005227 Quercus lobata HOM05D001787 ORTHO05D003488 2.1e-17 92.0 71 59.2
unitig_85.g27252 Utricularia gibba HOM05D001787 ORTHO05D003488 2.1e-17 92.0 69 52.2
Nitab4.5_0013731g0010 Nicotiana tabacum HOM05D001787 ORTHO05D003488 6.2e-17 90.5 71 49.3
Solyc08g062190.3 Solanum lycopersicum HOM05D001787 ORTHO05D003488 6.2e-17 90.5 71 49.3
Sopen08g017770 Solanum pennellii HOM05D001787 ORTHO05D003488 6.2e-17 90.5 71 49.3
Aqoxy7G01090 Aquilegia oxysepala HOM05D001787 ORTHO05D003488 8.1e-17 90.1 66 59.1
AUR62009096 Chenopodium quinoa HOM05D001787 ORTHO05D003488 1.1e-16 89.7 69 52.2
AUR62020575 Chenopodium quinoa HOM05D001787 ORTHO05D003488 1.1e-16 89.7 69 52.2
EL10Ac1g00620 Beta vulgaris HOM05D001787 ORTHO05D003488 1.4e-16 89.4 69 55.1
Nitab4.5_0002842g0080 Nicotiana tabacum HOM05D001787 ORTHO05D003488 1.4e-16 89.4 72 52.8
Nitab4.5_0004953g0080 Nicotiana tabacum HOM05D001787 ORTHO05D003488 1.4e-16 89.4 71 49.3
Peaxi162Scf00809g00036 Petunia axillaris HOM05D001787 ORTHO05D003488 1.4e-16 89.4 71 49.3
HPP92_007990 Vanilla planifolia HOM05D001787 ORTHO05D003488 1.4e-16 89.4 74 50.0
Oeu049517.3 Olea europaea HOM05D001787 ORTHO05D000004 1.8e-16 89.0 69 52.2
QL05p008172 Quercus lobata HOM05D001787 ORTHO05D003488 1.8e-16 89.0 62 62.9
Sc06g0001080 Simmondsia chinensis HOM05D001787 ORTHO05D003488 1.8e-16 89.0 69 52.2
BcaC03g13408 Brassica carinata HOM05D001787 ORTHO05D003488 2.4e-16 88.6 69 52.2
Aqoxy7G01096 Aquilegia oxysepala HOM05D001787 ORTHO05D003488 3.1e-16 88.2 69 50.7
DCAR_000814 Daucus carota HOM05D001787 ORTHO05D003488 3.1e-16 88.2 69 50.7
Duzib168G1000 Durio zibethinus HOM05D001787 ORTHO05D003488 3.1e-16 88.2 69 50.7
Hund03302 Selenicereus undatus HOM05D001787 ORTHO05D003488 3.1e-16 88.2 69 50.7
CANSAT25G0744 Cannabis sativa HOM05D001787 ORTHO05D003488 4.0e-16 87.8 69 49.3
AUR62028997 Chenopodium quinoa HOM05D001787 ORTHO05D003488 4.0e-16 87.8 74 51.4
Cc08_g01340 Coffea canephora HOM05D001787 ORTHO05D003488 4.0e-16 87.8 69 49.3
Migut.E01575 Erythranthe guttata HOM05D001787 ORTHO05D003488 4.0e-16 87.8 69 49.3
Lj7A240G29 Lonicera japonica HOM05D001787 ORTHO05D003488 4.0e-16 87.8 69 52.2
Medtr3g104850 Medicago truncatula HOM05D001787 ORTHO05D003488 4.0e-16 87.8 69 50.7
MSTRG.1688 Avicennia marina HOM05D001787 ORTHO05D003488 5.3e-16 87.4 69 49.3
CDE05G2002 Ceratophyllum demersum HOM05D001762 ORTHO05D001774 5.3e-16 87.4 71 53.5
PSO210G0001 Papaver somniferum HOM05D001787 ORTHO05D003488 5.3e-16 87.4 71 47.9
Peaxi162Scf00219g00512 Petunia axillaris HOM05D001787 ORTHO05D003488 5.3e-16 87.4 71 52.1
TAR633G0053 Trochodendron aralioides HOM05D001787 ORTHO05D003488 5.3e-16 87.4 69 50.7
MD09G1185100 Malus domestica HOM05D001787 ORTHO05D003488 6.9e-16 87.0 67 59.7
Nitab4.5_0010890g0010 Nicotiana tabacum HOM05D001787 ORTHO05D003488 6.9e-16 87.0 67 55.2
Sp6g31560 Schrenkiella parvula HOM05D001787 ORTHO05D003488 6.9e-16 87.0 69 52.2
SGA_v2.0_scaffold163G38003 Striga asiatica HOM05D001787 ORTHO05D003488 6.9e-16 87.0 69 47.8
vmacro15022 Vaccinium macrocarpon HOM05D001787 ORTHO05D003488 6.9e-16 87.0 67 56.7
AT5G12040 Arabidopsis thaliana HOM05D001787 ORTHO05D003488 9.0e-16 86.7 69 50.7
Carub.0006s1056 Capsella rubella HOM05D001787 ORTHO05D003488 9.0e-16 86.7 69 50.7
Dinv41832 Davidia involucrata HOM05D001787 ORTHO05D003488 9.0e-16 86.7 69 47.8
SalBow1G1427 Salvia bowleyana HOM05D001787 ORTHO05D003488 9.0e-16 86.7 71 46.5
SalBow1G2786 Salvia bowleyana HOM05D001787 ORTHO05D003488 9.0e-16 86.7 71 49.3
Ah.10g034000 Amaranthus hybridus HOM05D001787 ORTHO05D003488 1.2e-15 86.3 69 49.3
BcaB01g05433 Brassica carinata HOM05D001787 ORTHO05D003488 1.2e-15 86.3 69 49.3
A03p05370 Brassica napus HOM05D001787 ORTHO05D003488 1.2e-15 86.3 69 49.3
BolC3t13126H Brassica oleracea HOM05D001787 ORTHO05D003488 1.2e-15 86.3 69 49.3
BraA03t09875Z Brassica rapa HOM05D001787 ORTHO05D003488 1.2e-15 86.3 69 49.3
Thhalv10013923m.g Eutrema salsugineum HOM05D001787 ORTHO05D003488 1.2e-15 86.3 69 50.7
PSO210G6170 Papaver somniferum HOM05D001787 ORTHO05D003488 1.2e-15 86.3 70 48.6
SGA_v2.0_scaffold21G09471 Striga asiatica HOM05D001787 ORTHO05D003488 1.2e-15 86.3 74 50.0
vmacro06317 Vaccinium macrocarpon HOM05D001787 ORTHO05D003488 1.2e-15 86.3 80 43.8
Cc06_g11880 Coffea canephora HOM05D001787 ORTHO05D003488 1.5e-15 85.9 69 52.2
Duzib187G1874 Durio zibethinus HOM05D001787 ORTHO05D003488 1.5e-15 85.9 69 50.7
Migut.L01543 Erythranthe guttata HOM05D001787 ORTHO05D003488 1.5e-15 85.9 71 49.3
Gorai.009G041600 Gossypium raimondii HOM05D001787 ORTHO05D003488 1.5e-15 85.9 71 47.9
Nn8g38721 Nelumbo nucifera HOM05D001787 ORTHO05D003488 1.5e-15 85.9 69 49.3
Sopen07g020590 Solanum pennellii HOM05D001787 ORTHO05D003488 1.5e-15 85.9 69 52.2
THA.LOC104811224 Tarenaya hassleriana HOM05D001787 ORTHO05D003488 1.5e-15 85.9 69 50.7
Thecc.09G060900 Theobroma cacao HOM05D001787 ORTHO05D003488 1.5e-15 85.9 69 46.4
Actinidia38464 Actinidia chinensis HOM05D001787 ORTHO05D003488 2.0e-15 85.5 71 47.9
Ciclev10008710m.g Citrus clementina HOM05D001787 ORTHO05D003488 2.0e-15 85.5 69 49.3
Nn6g35589 Nelumbo nucifera HOM05D001787 ORTHO05D003488 2.0e-15 85.5 69 49.3
Solyc07g041280.4 Solanum lycopersicum HOM05D001787 ORTHO05D003488 2.0e-15 85.5 69 50.7
THA.LOC104811223 Tarenaya hassleriana HOM05D001787 ORTHO05D003488 2.0e-15 85.5 71 47.9
TAR624G1095 Trochodendron aralioides HOM05D001787 ORTHO05D003488 2.0e-15 85.5 69 50.7
Actinidia29918 Actinidia chinensis HOM05D001787 ORTHO05D003488 2.6e-15 85.1 69 47.8
EL10Ac2g03801 Beta vulgaris HOM05D001787 ORTHO05D003488 2.6e-15 85.1 67 50.7
Gohir.D05G041100 Gossypium hirsutum HOM05D001787 ORTHO05D003488 2.6e-15 85.1 71 47.9
MD15G1052400 Malus domestica HOM05D001787 ORTHO05D003488 2.6e-15 85.1 69 50.7
MD15G1052500 Malus domestica HOM05D001787 ORTHO05D003488 2.6e-15 85.1 69 50.7
Oeu003980.1 Olea europaea HOM05D001787 ORTHO05D003488 2.6e-15 85.1 69 47.8
Pp3c16_17560 Physcomitrium patens HOM05D001787 ORTHO05D003488 2.6e-15 85.1 67 52.2
GSVIVG01035444001 Vitis vinifera HOM05D001787 ORTHO05D003488 2.6e-15 85.1 69 49.3
Aa31LG3G15190 Aethionema arabicum HOM05D001787 ORTHO05D003488 3.4e-15 84.7 69 49.3
Duzib150G0917 Durio zibethinus HOM05D001787 ORTHO05D003488 3.4e-15 84.7 69 47.8
ECA247G1321 Erigeron canadensis HOM05D001787 ORTHO05D003488 3.4e-15 84.7 70 52.9
Gohir.A05G039600 Gossypium hirsutum HOM05D001787 ORTHO05D003488 3.4e-15 84.7 69 47.8
Prupe.1G406400 Prunus persica HOM05D001787 ORTHO05D003488 3.4e-15 84.7 69 47.8
TPR.G3515 Trifolium pratense HOM05D001787 ORTHO05D003488 3.4e-15 84.7 69 47.8
C03p06190 Brassica napus HOM05D001787 ORTHO05D003488 4.5e-15 84.3 69 47.8
CiPaw.15G090300 Carya illinoinensis HOM05D001787 ORTHO05D003488 4.5e-15 84.3 69 47.8
Dinv42368 Davidia involucrata HOM05D001787 ORTHO05D003488 4.5e-15 84.3 69 49.3
Zm00001eb402000 Zea mays HOM05D001787 ORTHO05D003488 4.5e-15 84.3 69 47.8
AL6G22830 Arabidopsis lyrata HOM05D001787 ORTHO05D003488 5.8e-15 84.0 69 49.3
Eucgr.C00706 Eucalyptus grandis HOM05D001787 ORTHO05D003488 5.8e-15 84.0 69 44.9
FvH4_2g31270 Fragaria vesca HOM05D001787 ORTHO05D003488 5.8e-15 84.0 69 46.4
FAN20G1398 Fragaria x ananassa HOM05D001787 ORTHO05D003488 5.8e-15 84.0 69 47.8
Lj1g0020987 Lotus japonicus HOM05D001787 ORTHO05D003488 5.8e-15 84.0 69 49.3
MBI19_g20415_MAGBIO Magnolia biondii HOM05D001787 ORTHO05D003488 5.8e-15 84.0 71 47.9
TWI63G1842 Tripterygium wilfordii HOM05D001787 ORTHO05D003488 5.8e-15 84.0 69 47.8
MSTRG.10525 Avicennia marina HOM05D001787 ORTHO05D003488 7.6e-15 83.6 69 49.3
Os03g0175600 Oryza sativa ssp. japonica HOM05D001787 ORTHO05D003488 7.6e-15 83.6 69 49.3
Glyma.06G055100 Glycine max HOM05D001787 ORTHO05D003488 9.9e-15 83.2 69 46.4
Lalb_Chr11g0063301 Lupinus albus HOM05D001787 ORTHO05D003488 9.9e-15 83.2 69 46.4
PSO063G6311 Papaver somniferum HOM05D001787 ORTHO05D003488 9.9e-15 83.2 69 47.8
PSO421G0350 Papaver somniferum HOM05D001787 ORTHO05D003488 9.9e-15 83.2 69 47.8
Rhsim03G0230100 Rhododendron simsii HOM05D001787 ORTHO05D003488 9.9e-15 83.2 69 46.4
Sed0025039 Sechium edule HOM05D001787 ORTHO05D003488 9.9e-15 83.2 69 47.8
Sc18g0002390 Simmondsia chinensis HOM05D001787 ORTHO05D003488 9.9e-15 83.2 70 47.1
TWI34G1008 Tripterygium wilfordii HOM05D001787 ORTHO05D003488 9.9e-15 83.2 72 45.8
VMungo1309G1305 Vigna mungo HOM05D001787 ORTHO05D003488 9.9e-15 83.2 69 46.4
Ca_15840_v3 Cicer arietinum L. HOM05D001787 ORTHO05D003488 1.3e-14 82.8 69 47.8
ClCG05G015620 Citrullus lanatus HOM05D001787 ORTHO05D003488 1.3e-14 82.8 69 47.8
MD08G1069600 Malus domestica HOM05D001787 ORTHO05D003488 1.3e-14 82.8 69 47.8
Psat5g035080 Pisum sativum HOM05D001787 ORTHO05D003488 1.3e-14 82.8 69 47.8
EL10Ac8g19134 Beta vulgaris HOM05D001787 ORTHO05D003488 1.7e-14 82.4 69 47.8
MELO3C016902.2 Cucumis melo HOM05D001787 ORTHO05D003488 1.7e-14 82.4 69 47.8
ECA234G2841 Erigeron canadensis HOM05D001787 ORTHO05D003488 1.7e-14 82.4 71 45.1
Hma1.2p1_0231F.1_g097470 Hydrangea macrophylla HOM05D001787 ORTHO05D003488 1.7e-14 82.4 69 46.4
Mapoly0001s0148 Marchantia polymorpha HOM05D001787 ORTHO05D003488 1.7e-14 82.4 66 53.0
C02p05580 Brassica napus HOM05D001787 ORTHO05D003488 2.2e-14 82.0 69 50.7
BolC2t06502H Brassica oleracea HOM05D001787 ORTHO05D003488 2.2e-14 82.0 69 50.7
AUR62001494 Chenopodium quinoa HOM05D001787 ORTHO05D003488 2.2e-14 82.0 66 54.5
Gohir.D07G020300 Gossypium hirsutum HOM05D001787 ORTHO05D003488 2.2e-14 82.0 69 46.4
Gorai.001G021100 Gossypium raimondii HOM05D001787 ORTHO05D003488 2.2e-14 82.0 69 46.4
Phvul.009G081000 Phaseolus vulgaris HOM05D001787 ORTHO05D003488 2.2e-14 82.0 69 46.4
arahy.Tifrunner.gnm1.ann1.DZ6J9T Arachis hypogaea HOM05D001787 ORTHO05D003488 2.9e-14 81.6 69 46.4
CsaV3_4G035950 Cucumis sativus L. HOM05D001787 ORTHO05D003488 2.9e-14 81.6 66 50.0
FAN24G0956 Fragaria x ananassa HOM05D001787 ORTHO05D003488 2.9e-14 81.6 69 44.9
FAN27G0678 Fragaria x ananassa HOM05D001787 ORTHO05D003488 2.9e-14 81.6 69 44.9
HanXRQChr10g0303441 Helianthus annuus HOM05D001787 ORTHO05D003488 2.9e-14 81.6 69 44.9
Potri.006G222900 Populus trichocarpa HOM05D001787 ORTHO05D003488 2.9e-14 81.6 69 47.8
ATR0598G124 Amborella trichopoda HOM05D001787 ORTHO05D003488 3.8e-14 81.3 66 56.1
PGR031G0779 Punica granatum HOM05D001787 ORTHO05D003488 3.8e-14 81.3 69 44.9
RcHm_v2.0_Chr6g0311531 Rosa chinensis HOM05D001787 ORTHO05D003488 3.8e-14 81.3 69 44.9
Sabra06G0172300 Salix brachista HOM05D001787 ORTHO05D003488 3.8e-14 81.3 69 47.8
SMO116G0031 Selaginella moellendorffii HOM05D001787 ORTHO05D003488 3.8e-14 81.3 67 47.8
ATR0598G171 Amborella trichopoda HOM05D001787 ORTHO05D003488 6.4e-14 80.5 71 46.5
arahy.Tifrunner.gnm1.ann1.0IZ382 Arachis hypogaea HOM05D001787 ORTHO05D003488 6.4e-14 80.5 69 44.9
Cpa.g.sc126.41 Carica papaya HOM05D001787 ORTHO05D003488 6.4e-14 80.5 69 46.4
Os06g0206000 Oryza sativa ssp. japonica HOM05D001787 ORTHO05D003488 6.4e-14 80.5 64 54.7
C09p64810 Brassica napus HOM05D001787 ORTHO05D003488 1.1e-13 79.7 67 49.3
BolC9t59312H Brassica oleracea HOM05D001787 ORTHO05D003488 1.1e-13 79.7 67 49.3
Lsat_1_v5_gn_5_82521 Lactuca sativa HOM05D001787 ORTHO05D003488 1.1e-13 79.7 70 47.1
AUR62009876 Chenopodium quinoa HOM05D001787 ORTHO05D003488 3.2e-13 78.2 69 49.3
CBR_g17055 Chara braunii HOM05D001787 ORTHO05D003488 4.2e-13 77.8 67 50.7
A10p25730 Brassica napus HOM05D001787 ORTHO05D003488 3.5e-12 74.7 67 46.3
BraA10t44639Z Brassica rapa HOM05D001787 ORTHO05D003488 3.5e-12 74.7 67 46.3
Cre11.g467717 Chlamydomonas reinhardtii HOM05D001787 ORTHO05D003488 1.0e-11 73.2 66 42.4
Cre12.g507558 Chlamydomonas reinhardtii HOM05D001787 ORTHO05D003488 1.0e-11 73.2 66 42.4
Pp3c5_22250 Physcomitrium patens HOM05D001787 ORTHO05D003488 1.8e-11 72.4 65 47.7
Peaxi162Scf00834g00003 Petunia axillaris HOM05D001787 ORTHO05D003488 6.7e-11 70.5 56 51.8
Sed0024349 Sechium edule HOM05D001787 ORTHO05D003488 3.3e-10 68.2 67 40.3
AUR62025177 Chenopodium quinoa HOM05D001787 ORTHO05D003488 4.3e-10 67.8 48 56.2
PGSC0003DMG400019574 Solanum tuberosum HOM05D001787 ORTHO05D003488 5.6e-10 67.4 48 60.4
Actinidia21360 Actinidia chinensis HOM05D001787 ORTHO05D056414 2.8e-09 65.1 48 64.6
Hund08712 Selenicereus undatus HOM05D001787 ORTHO05D003488 3.7e-09 64.7 104 31.7
Actinidia25700 Actinidia chinensis HOM05D001787 ORTHO05D003488 4.8e-09 64.3 45 48.9
Zm00001eb005710 Zea mays HOM05D001787 ORTHO05D003488 4.8e-09 64.3 45 57.8
MCO05G194 Micromonas commoda HOM05D001787 ORTHO05D003488 1.4e-08 62.8 67 44.8
Ah.08g216720 Amaranthus hybridus HOM05D001787 ORTHO05D003488 1.5e-07 59.3 48 52.1
Ah.09g231300 Amaranthus hybridus HOM05D001056 ORTHO05D000902 1.7e-06 55.8 46 45.7
Cfa026457 Carpinus fangiana HOM05D001787 ORTHO05D003488 1.7e-06 55.8 65 38.5
Lj7A234T35 Lonicera japonica HOM05D001787 ORTHO05D003488 1.7e-06 55.8 48 47.9
FAN15G0901 Fragaria x ananassa HOM05D001787 ORTHO05D003488 2.2e-06 55.5 38 55.3


User provided reference genes

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