Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008083g0020 Nicotiana tabacum HOM05D006104 ORTHO05D008303 2.8e-247 858.2 443 100.0
Nitab4.5_0002297g0090 Nicotiana tabacum HOM05D006104 ORTHO05D008303 3.0e-217 758.4 433 91.7
PGSC0003DMG400021455 Solanum tuberosum HOM05D006104 ORTHO05D008303 1.1e-174 617.1 365 88.5
Sopen02g011830 Solanum pennellii HOM05D006104 ORTHO05D008303 1.0e-169 600.5 364 86.8
Solyc02g036470.4 Solanum lycopersicum HOM05D006104 ORTHO05D008303 3.7e-167 592.0 365 85.5
Peaxi162Scf00784g00028 Petunia axillaris HOM05D006104 ORTHO05D008303 9.1e-166 587.4 369 84.8
CAN.G304.9 Capsicum annuum HOM05D006104 ORTHO05D008303 9.7e-152 540.8 369 79.4
Dinv19095 Davidia involucrata HOM05D006104 ORTHO05D008303 6.5e-148 528.1 373 76.1
MSTRG.15618 Avicennia marina HOM05D006104 ORTHO05D008303 1.1e-147 527.3 360 75.8
Rhsim10G0186700 Rhododendron simsii HOM05D006104 ORTHO05D008303 3.2e-147 525.8 370 75.7
SGA_v2.0_scaffold199G41251 Striga asiatica HOM05D006104 ORTHO05D008303 1.6e-146 523.5 370 73.2
Oeu058858.1 Olea europaea HOM05D006104 ORTHO05D008303 8.8e-145 517.7 322 80.4
arahy.Tifrunner.gnm1.ann1.B0P6V2 Arachis hypogaea HOM05D006104 ORTHO05D008303 2.6e-144 516.2 365 74.8
arahy.Tifrunner.gnm1.ann1.W9ZMNH Arachis hypogaea HOM05D006104 ORTHO05D008303 4.4e-144 515.4 365 74.2
Hund22221 Selenicereus undatus HOM05D006104 ORTHO05D008303 1.7e-143 513.5 355 72.4
Migut.K01201 Erythranthe guttata HOM05D006104 ORTHO05D008303 8.3e-143 511.1 353 73.9
Cpa.g.sc108.21 Carica papaya HOM05D006104 ORTHO05D008303 7.0e-142 508.1 333 76.6
PSO063G5766 Papaver somniferum HOM05D006104 ORTHO05D008303 3.5e-141 505.8 361 73.7
Gorai.008G055000 Gossypium raimondii HOM05D006104 ORTHO05D008303 4.5e-141 505.4 349 74.5
Thecc.04G056600 Theobroma cacao HOM05D006104 ORTHO05D008303 4.5e-141 505.4 372 71.5
ECA232G1605 Erigeron canadensis HOM05D006104 ORTHO05D008303 7.7e-141 504.6 351 74.4
Gohir.D12G051700 Gossypium hirsutum HOM05D006104 ORTHO05D008303 1.0e-140 504.2 349 74.2
CiPaw.03G009900 Carya illinoinensis HOM05D006104 ORTHO05D008303 1.3e-140 503.8 352 74.4
AUR62037537 Chenopodium quinoa HOM05D006104 ORTHO05D008303 1.3e-140 503.8 362 69.9
Glyma.18G047900 Glycine max HOM05D006104 ORTHO05D008303 1.7e-140 503.4 333 77.8
FvH4_5g39720 Fragaria vesca HOM05D006104 ORTHO05D008303 2.9e-140 502.7 350 73.7
Glyma.11G202900 Glycine max HOM05D006104 ORTHO05D008303 3.8e-140 502.3 333 77.2
FAN18G3652 Fragaria x ananassa HOM05D006104 ORTHO05D008303 1.1e-139 500.7 350 73.4
Cfa008019 Carpinus fangiana HOM05D006104 ORTHO05D008303 1.9e-139 500.0 352 74.4
Ah.06g191390 Amaranthus hybridus HOM05D006104 ORTHO05D008303 5.5e-139 498.4 356 70.8
AUR62035547 Chenopodium quinoa HOM05D006104 ORTHO05D008303 5.5e-139 498.4 367 68.7
Potri.012G145300 Populus trichocarpa HOM05D006104 ORTHO05D008303 9.5e-139 497.7 363 72.7
TAR371G0041 Trochodendron aralioides HOM05D006104 ORTHO05D008303 9.5e-139 497.7 351 74.9
Haze_14041 Corylus avellana HOM05D006104 ORTHO05D008303 4.7e-138 495.4 377 70.3
EL10Ac1g01448 Beta vulgaris HOM05D006104 ORTHO05D008303 6.1e-138 495.0 337 73.0
Ciclev10011871m.g Citrus clementina HOM05D006104 ORTHO05D008303 8.0e-138 494.6 380 70.0
HanXRQChr15g0486461 Helianthus annuus HOM05D006104 ORTHO05D008303 8.0e-138 494.6 361 71.2
DCAR_003391 Daucus carota HOM05D006104 ORTHO05D008303 1.4e-137 493.8 288 84.4
Lj6g0001971 Lotus japonicus HOM05D006104 ORTHO05D008303 1.4e-137 493.8 376 69.9
RcHm_v2.0_Chr7g0242021 Rosa chinensis HOM05D006104 ORTHO05D008303 3.0e-137 492.7 366 71.3
CANSAT78G2105 Cannabis sativa HOM05D006104 ORTHO05D008303 6.8e-137 491.5 350 73.1
Duzib138G0961 Durio zibethinus HOM05D006104 ORTHO05D008303 8.9e-137 491.1 361 71.2
Carub.0003s0179 Capsella rubella HOM05D006104 ORTHO05D008303 1.2e-136 490.7 350 71.7
Aa31LG5G13170 Aethionema arabicum HOM05D006104 ORTHO05D008303 1.5e-136 490.3 350 70.9
Ca_15100_v3 Cicer arietinum L. HOM05D006104 ORTHO05D008303 1.5e-136 490.3 344 76.7
Sp3g01720 Schrenkiella parvula HOM05D006104 ORTHO05D008303 2.6e-136 489.6 373 69.4
Thhalv10020801m.g Eutrema salsugineum HOM05D006104 ORTHO05D008303 3.4e-136 489.2 350 72.9
MBI06_g37978_MAGBIO Magnolia biondii HOM05D006104 ORTHO05D008303 4.4e-136 488.8 340 75.0
Lsat_1_v5_gn_8_114940 Lactuca sativa HOM05D006104 ORTHO05D008303 5.7e-136 488.4 359 70.8
TWI74G1645 Tripterygium wilfordii HOM05D006104 ORTHO05D008303 7.5e-136 488.0 330 75.8
QL02p055508 Quercus lobata HOM05D006104 ORTHO05D008303 9.8e-136 487.6 360 71.1
CARHR076690 Cardamine hirsuta HOM05D006104 ORTHO05D008303 1.3e-135 487.3 372 69.4
ClCG01G008400 Citrullus lanatus HOM05D006104 ORTHO05D008303 1.3e-135 487.3 363 68.6
MD09G1187600 Malus domestica HOM05D006104 ORTHO05D008303 4.9e-135 485.3 337 74.5
Eucgr.J01650 Eucalyptus grandis HOM05D006104 ORTHO05D008303 6.3e-135 485.0 289 81.3
THA.LOC104820927 Tarenaya hassleriana HOM05D006104 ORTHO05D008303 1.6e-133 480.3 344 73.3
BraA01t04624Z Brassica rapa HOM05D006104 ORTHO05D008303 2.0e-133 479.9 367 69.2
BNapus_Darmor_BZH_scaffold_122p00170 Brassica napus HOM05D006104 ORTHO05D008303 7.8e-133 478.0 367 68.9
Atru.chr1.2189 Acer truncatum HOM05D006104 ORTHO05D008303 1.3e-132 477.2 287 83.3
AL3G12080 Arabidopsis lyrata HOM05D006104 ORTHO05D008303 1.3e-132 477.2 350 70.6
PGR042G1876 Punica granatum HOM05D006104 ORTHO05D008303 2.9e-132 476.1 340 72.4
CDE04G1404 Ceratophyllum demersum HOM05D006104 ORTHO05D008303 5.0e-132 475.3 344 70.6
Lj4A249G56 Lonicera japonica HOM05D006104 ORTHO05D008303 5.0e-132 475.3 290 82.1
Nn4g25028 Nelumbo nucifera HOM05D006104 ORTHO05D008303 1.5e-131 473.8 364 67.3
BolC1t05884H Brassica oleracea HOM05D006104 ORTHO05D008303 2.5e-131 473.0 381 65.9
Gohir.A12G053200 Gossypium hirsutum HOM05D006104 ORTHO05D008303 4.3e-131 472.2 326 74.8
Medtr3g063240 Medicago truncatula HOM05D006104 ORTHO05D008303 5.6e-131 471.9 300 78.3
ATR0124G053 Amborella trichopoda HOM05D006104 ORTHO05D008303 2.8e-130 469.5 338 71.3
FAN08G3450 Fragaria x ananassa HOM05D006104 ORTHO05D008303 8.0e-130 468.0 429 60.1
Cc07_g12610 Coffea canephora HOM05D006104 ORTHO05D008303 2.3e-129 466.5 271 85.6
AT3G02690 Arabidopsis thaliana HOM05D006104 ORTHO05D008303 6.8e-129 464.9 333 72.1
Aqoxy3G04351 Aquilegia oxysepala HOM05D006104 ORTHO05D008303 8.9e-129 464.5 355 69.9
Zm00001eb044830 Zea mays HOM05D006104 ORTHO05D008303 1.5e-128 463.8 382 63.4
Actinidia32997 Actinidia chinensis HOM05D006104 ORTHO05D008303 4.4e-128 462.2 372 68.0
Medtr3g063250 Medicago truncatula HOM05D006104 ORTHO05D008303 4.4e-128 462.2 350 70.3
Sabra12G0109100 Salix brachista HOM05D006104 ORTHO05D008303 4.4e-128 462.2 388 64.9
Lalb_Chr18g0053941 Lupinus albus HOM05D006104 ORTHO05D008303 2.9e-127 459.5 352 69.0
GSVIVG01033198001 Vitis vinifera HOM05D006104 ORTHO05D008303 6.4e-127 458.4 271 85.6
Phvul.006G083500 Phaseolus vulgaris HOM05D006104 ORTHO05D008303 1.4e-126 457.2 361 65.9
VMungo0540G0919 Vigna mungo HOM05D006104 ORTHO05D008303 5.4e-126 455.3 336 69.9
HPP92_022205 Vanilla planifolia HOM05D006104 ORTHO05D008303 3.5e-125 452.6 377 65.3
AagrBONN_evm.TU.Sc2ySwM_368.1984 Anthoceros agrestis HOM05D006104 ORTHO05D008303 1.3e-124 450.7 361 66.8
Sc09g0004650 Simmondsia chinensis HOM05D006104 ORTHO05D008303 1.4e-121 440.7 331 68.6
unitig_748.g7253 Utricularia gibba HOM05D006104 ORTHO05D008303 4.4e-120 435.6 341 68.6
MELO3C025108.2 Cucumis melo HOM05D006104 ORTHO05D008303 2.1e-117 426.8 513 48.9
SalBow5G0256 Salvia bowleyana HOM05D006104 ORTHO05D008303 6.2e-114 415.2 352 63.9
Pp3c19_6070 Physcomitrium patens HOM05D006104 ORTHO05D008303 8.9e-113 411.4 386 56.2
BNapus_Darmor_BZH_scaffold_99p00200 Brassica napus HOM05D006104 ORTHO05D008303 2.6e-112 409.8 258 79.8
SMO364G0667 Selaginella moellendorffii HOM05D006104 ORTHO05D008303 7.6e-112 408.3 366 59.6
Hma1.2p1_0085F.1_g043890 Hydrangea macrophylla HOM05D006104 ORTHO05D008303 2.4e-110 403.3 333 66.4
FAN04G1807 Fragaria x ananassa HOM05D006104 ORTHO05D008303 7.1e-110 401.7 449 51.7
vmacro20444 Vaccinium macrocarpon HOM05D006104 ORTHO05D008303 8.6e-108 394.8 330 65.2
EL10Ac4g08870 Beta vulgaris HOM05D006104 ORTHO05D008303 8.1e-106 388.3 237 80.2
Mapoly0068s0059 Marchantia polymorpha HOM05D006104 ORTHO05D008303 1.4e-105 387.5 436 52.1
CSS0044834 Camellia sinensis var. sinensis HOM05D006104 ORTHO05D008303 8.4e-103 378.3 290 70.0
MCO16G393 Micromonas commoda HOM05D006104 ORTHO05D008303 1.6e-98 364.0 358 57.0
CBR_g22386 Chara braunii HOM05D006104 ORTHO05D008303 2.8e-98 363.2 398 52.8
Manes.01G125800 Manihot esculenta HOM05D006104 ORTHO05D008303 4.6e-93 345.9 275 67.6
CsaV3_5G024350 Cucumis sativus L. HOM05D006104 ORTHO05D008303 3.3e-91 339.7 276 64.9
Prupe.8G267800 Prunus persica HOM05D006104 ORTHO05D008303 9.0e-89 331.6 277 65.0
Sed0008277 Sechium edule HOM05D006104 ORTHO05D008303 1.5e-88 330.9 266 67.7
COL.COLO4_13439 Corchorus olitorius HOM05D006104 ORTHO05D008303 4.5e-88 329.3 269 67.7
Pp3c7_24690 Physcomitrium patens HOM05D006104 ORTHO05D008303 1.8e-84 317.4 339 48.7
SEGI_11411 Sequoiadendron giganteum HOM05D006104 ORTHO05D008303 1.6e-82 310.8 255 64.7
Cre12.g507950 Chlamydomonas reinhardtii HOM05D006104 ORTHO05D008303 5.5e-78 295.8 402 44.8
PRCOL_00000403 Prasinoderma coloniale HOM05D006104 ORTHO05D008303 5.5e-78 295.8 291 59.5
TPR.G37386 Trifolium pratense HOM05D006104 ORTHO05D008303 4.3e-75 286.2 194 77.3
Os10g0493900 Oryza sativa ssp. japonica HOM05D006104 ORTHO05D008303 1.6e-66 257.7 153 80.4
QL02p056562 Quercus lobata HOM05D006104 ORTHO05D008303 2.2e-66 257.3 153 81.0
SEGI_16808 Sequoiadendron giganteum HOM05D006104 ORTHO05D008303 2.7e-61 240.4 160 73.1
TPR.G14061 Trifolium pratense HOM05D006104 ORTHO05D008303 3.9e-60 236.5 218 63.3
arahy.Tifrunner.gnm1.ann1.4P08NV Arachis hypogaea HOM05D006104 ORTHO05D008303 2.5e-59 233.8 204 63.2
Psat5g144680 Pisum sativum HOM05D006104 ORTHO05D008303 1.2e-45 188.3 143 67.1
arahy.Tifrunner.gnm1.ann1.2Q0DPQ Arachis hypogaea HOM05D006104 ORTHO05D008303 5.0e-31 139.8 122 59.0
arahy.Tifrunner.gnm1.ann1.LG1UYC Arachis hypogaea HOM05D006104 ORTHO05D008303 7.2e-30 136.0 123 56.9
BraA02t04668Z Brassica rapa HOM05D006104 ORTHO05D008303 4.4e-27 126.7 133 56.4
Psat0s2701g0160 Pisum sativum HOM05D006104 ORTHO05D000113 1.8e-25 121.3 90 66.7
Psat5g144720 Pisum sativum HOM05D006104 ORTHO05D008303 2.5e-22 110.9 102 57.8
arahy.Tifrunner.gnm1.ann1.12AD17 Arachis hypogaea HOM05D000052 ORTHO05D000046 5.6e-22 109.8 92 63.0
Cpa.g.c43318 Carica papaya HOM05D006104 ORTHO05D117575 6.4e-18 96.3 255 29.8
Psat7g173760 Pisum sativum HOM05D006104 ORTHO05D008303 2.7e-16 90.9 69 65.2
Psat5g203840 Pisum sativum HOM05D006104 ORTHO05D324349 1.0e-15 89.0 161 51.6
Psat4g208480 Pisum sativum HOM05D006104 ORTHO05D008303 5.8e-11 73.2 35 97.1
Psat4g208520 Pisum sativum HOM05D006104 ORTHO05D008303 1.4e-09 68.6 57 64.9


User provided reference genes

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