Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008083g0010 Nicotiana tabacum HOM05D003795 ORTHO05D004308 0.0e+00 1138.3 617 100.0
Nitab4.5_0002297g0070 Nicotiana tabacum HOM05D003795 ORTHO05D004308 3.0e-268 928.3 625 82.6
CAN.G304.8 Capsicum annuum HOM05D003795 ORTHO05D004308 1.8e-164 583.6 602 61.8
PGSC0003DMG400021472 Solanum tuberosum HOM05D003795 ORTHO05D004308 1.2e-163 580.9 638 59.9
Sopen02g011820 Solanum pennellii HOM05D003795 ORTHO05D004308 6.3e-157 558.5 641 58.3
Solyc02g036460.3 Solanum lycopersicum HOM05D003795 ORTHO05D004308 1.8e-151 540.4 640 58.1
Peaxi162Scf00784g00029 Petunia axillaris HOM05D003795 ORTHO05D004308 6.1e-144 515.4 670 54.2
CAN.G809.93 Capsicum annuum HOM05D003795 ORTHO05D004308 1.8e-132 477.2 729 49.1
Peaxi162Scf00344g00199 Petunia axillaris HOM05D003795 ORTHO05D004308 1.0e-127 461.5 679 50.7
Nitab4.5_0000483g0170 Nicotiana tabacum HOM05D003795 ORTHO05D004308 4.6e-123 446.0 736 47.3
Nitab4.5_0012787g0030 Nicotiana tabacum HOM05D003795 ORTHO05D004308 1.5e-121 441.0 729 47.7
PGSC0003DMG400019727 Solanum tuberosum HOM05D003795 ORTHO05D004308 4.3e-121 439.5 724 46.5
Solyc02g081440.4 Solanum lycopersicum HOM05D003795 ORTHO05D004308 3.0e-114 416.8 748 46.3
Sopen02g026080 Solanum pennellii HOM05D003795 ORTHO05D004308 5.0e-114 416.0 744 45.7
Cc07_g12620 Coffea canephora HOM05D003795 ORTHO05D004308 1.1e-97 361.7 762 40.6
Lj2A509T28 Lonicera japonica HOM05D003795 ORTHO05D004308 2.7e-91 340.5 740 39.9
Dinv28269 Davidia involucrata HOM05D003795 ORTHO05D004308 4.6e-91 339.7 761 39.0
CSS0049356 Camellia sinensis var. sinensis HOM05D003795 ORTHO05D004308 2.6e-86 323.9 763 38.5
MSTRG.15619 Avicennia marina HOM05D003795 ORTHO05D004308 3.9e-82 310.1 723 41.5
DCAR_014135 Daucus carota HOM05D003795 ORTHO05D004308 5.8e-78 296.2 704 38.4
Duzib138G1939 Durio zibethinus HOM05D003795 ORTHO05D004308 8.4e-77 292.4 704 40.5
QL02p056567 Quercus lobata HOM05D003795 ORTHO05D004308 5.5e-76 289.7 796 36.8
Oeu060824.1 Olea europaea HOM05D003795 ORTHO05D004308 8.7e-74 282.3 603 41.6
QL02p055515 Quercus lobata HOM05D003795 ORTHO05D004308 1.5e-73 281.6 796 36.4
Haze_14040 Corylus avellana HOM05D003795 ORTHO05D004308 1.9e-73 281.2 708 39.1
Potri.012G145200 Populus trichocarpa HOM05D003795 ORTHO05D004308 3.3e-73 280.4 755 36.4
PGSC0003DMG402019715 Solanum tuberosum HOM05D003795 ORTHO05D004308 1.1e-71 275.4 253 64.4
Potri.015G147900 Populus trichocarpa HOM05D003795 ORTHO05D004308 3.1e-71 273.9 774 36.4
TWI74G0163 Tripterygium wilfordii HOM05D003795 ORTHO05D004308 5.3e-71 273.1 750 37.5
Oeu012502.2 Olea europaea HOM05D003795 ORTHO05D004308 4.5e-70 270.0 685 38.1
Sabra15G0156700 Salix brachista HOM05D003795 ORTHO05D004308 1.0e-69 268.9 782 36.1
Sabra12G0109200 Salix brachista HOM05D003795 ORTHO05D004308 2.9e-69 267.3 659 37.9
Manes.01G125700 Manihot esculenta HOM05D003795 ORTHO05D004308 1.1e-68 265.4 766 35.4
Phvul.006G083400 Phaseolus vulgaris HOM05D003795 ORTHO05D004308 1.1e-68 265.4 747 36.1
Manes.02G083300 Manihot esculenta HOM05D003795 ORTHO05D004308 1.0e-66 258.8 708 36.3
Oeu041416.1 Olea europaea HOM05D003795 ORTHO05D004308 1.0e-66 258.8 637 37.5
Thecc.04G056400 Theobroma cacao HOM05D003795 ORTHO05D004308 1.8e-66 258.1 738 36.7
TWI77G0024 Tripterygium wilfordii HOM05D003795 ORTHO05D004308 3.0e-66 257.3 742 35.8
VMungo0540G0009 Vigna mungo HOM05D003795 ORTHO05D004308 3.9e-66 256.9 747 36.5
MSTRG.3665 Avicennia marina HOM05D003795 ORTHO05D004308 5.1e-66 256.5 729 36.9
Cpa.g.sc108.20 Carica papaya HOM05D003795 ORTHO05D004308 5.7e-65 253.1 724 37.2
Gohir.A11G170300 Gossypium hirsutum HOM05D003795 ORTHO05D004308 5.7e-65 253.1 710 36.8
Glyma.18G048000 Glycine max HOM05D003795 ORTHO05D004308 7.4e-65 252.7 755 35.8
VMungo0647G0124 Vigna mungo HOM05D003795 ORTHO05D004308 9.6e-65 252.3 711 37.3
Hma1.2p1_0085F.1_g043870 Hydrangea macrophylla HOM05D003795 ORTHO05D004308 1.3e-64 251.9 763 35.3
Phvul.008G243000 Phaseolus vulgaris HOM05D003795 ORTHO05D004308 6.3e-64 249.6 699 36.9
CiPaw.03G010000 Carya illinoinensis HOM05D003795 ORTHO05D004308 8.2e-64 249.2 775 35.0
Hma1.2p1_0034F.1_g021500 Hydrangea macrophylla HOM05D003795 ORTHO05D004308 3.1e-63 247.3 759 33.3
GSVIVG01033197001 Vitis vinifera HOM05D003795 ORTHO05D004308 1.5e-62 245.0 691 36.5
Glyma.11G202800 Glycine max HOM05D003795 ORTHO05D004308 2.0e-62 244.6 775 35.5
Nn4g24995 Nelumbo nucifera HOM05D003795 ORTHO05D004308 2.9e-61 240.7 621 36.2
RcHm_v2.0_Chr7g0242011 Rosa chinensis HOM05D003795 ORTHO05D004308 6.5e-61 239.6 762 35.8
FvH4_5g39710 Fragaria vesca HOM05D003795 ORTHO05D004308 1.6e-59 235.0 754 35.3
FAN18G0662 Fragaria x ananassa HOM05D003795 ORTHO05D004308 6.1e-59 233.0 749 34.7
FAN18G1276 Fragaria x ananassa HOM05D003795 ORTHO05D004308 6.1e-59 233.0 749 34.7
CsaV3_5G024360 Cucumis sativus L. HOM05D003795 ORTHO05D004308 1.0e-58 232.3 786 33.6
Gohir.D11G177300 Gossypium hirsutum HOM05D003795 ORTHO05D004308 1.0e-58 232.3 696 35.8
SGA_v2.0_scaffold199G41250 Striga asiatica HOM05D003795 ORTHO05D004308 1.0e-58 232.3 702 37.2
Rhsim10G0186600 Rhododendron simsii HOM05D003795 ORTHO05D004308 5.1e-58 229.9 741 34.1
FAN08G2134 Fragaria x ananassa HOM05D003795 ORTHO05D004308 6.7e-58 229.6 752 35.1
Sed0021341 Sechium edule HOM05D003795 ORTHO05D004308 6.7e-58 229.6 722 34.3
Glyma.14G207900 Glycine max HOM05D003795 ORTHO05D004308 1.1e-57 228.8 734 34.3
vmacro20445 Vaccinium macrocarpon HOM05D003795 ORTHO05D004308 1.1e-57 228.8 678 35.4
Gorai.007G189400 Gossypium raimondii HOM05D003795 ORTHO05D004308 2.5e-57 227.6 699 35.5
SalBow5G4136 Salvia bowleyana HOM05D003795 ORTHO05D004308 4.3e-57 226.9 625 37.1
Ciclev10011149m.g Citrus clementina HOM05D003795 ORTHO05D004308 1.4e-55 221.9 784 33.4
ClCG01G008410 Citrullus lanatus HOM05D003795 ORTHO05D004308 5.3e-55 219.9 786 31.7
Ca_15099_v3 Cicer arietinum L. HOM05D003795 ORTHO05D004308 6.9e-55 219.5 694 33.4
unitig_0.g1678 Utricularia gibba HOM05D003795 ORTHO05D004308 6.9e-55 219.5 692 32.4
Lalb_Chr18g0053951 Lupinus albus HOM05D003795 ORTHO05D004308 1.2e-54 218.8 646 35.4
Hund22224 Selenicereus undatus HOM05D003795 ORTHO05D004308 2.0e-54 218.0 779 32.9
MELO3C025107.2 Cucumis melo HOM05D003795 ORTHO05D004308 3.4e-54 217.2 755 33.0
Glyma.02G239000 Glycine max HOM05D003795 ORTHO05D004308 1.3e-53 215.3 722 34.3
Psat5g144840 Pisum sativum HOM05D003795 ORTHO05D004308 2.2e-53 214.5 632 34.8
Migut.K01203 Erythranthe guttata HOM05D003795 ORTHO05D004308 5.0e-53 213.4 726 34.2
Nn4g24993 Nelumbo nucifera HOM05D003795 ORTHO05D004308 1.4e-52 211.8 661 34.6
FAN04G0804 Fragaria x ananassa HOM05D003795 ORTHO05D004308 7.2e-52 209.5 665 35.2
Medtr3g063210 Medicago truncatula HOM05D003795 ORTHO05D004308 1.6e-51 208.4 732 32.8
unitig_748.g7017 Utricularia gibba HOM05D003795 ORTHO05D004308 2.7e-51 207.6 681 33.5
TPR.G37433 Trifolium pratense HOM05D003795 ORTHO05D004308 3.6e-51 207.2 634 35.2
PSO063G2224 Papaver somniferum HOM05D003795 ORTHO05D004308 1.0e-50 205.7 630 35.6
Sc20g0000860 Simmondsia chinensis HOM05D003795 ORTHO05D004308 3.0e-50 204.1 688 33.0
THA.LOC104805668 Tarenaya hassleriana HOM05D003795 ORTHO05D004308 2.5e-49 201.1 709 34.1
Peaxi162Scf00116g00915 Petunia axillaris HOM05D004744 ORTHO05D005655 5.7e-49 199.9 205 58.0
EL10Ac4g08850 Beta vulgaris HOM05D003795 ORTHO05D004308 9.7e-49 199.1 788 31.1
PSO782G2347 Papaver somniferum HOM05D003795 ORTHO05D004308 1.3e-48 198.7 628 34.4
MBI06_g17214_MAGBIO Magnolia biondii HOM05D003795 ORTHO05D004308 2.8e-48 197.6 566 35.5
Lsat_1_v5_gn_2_72041 Lactuca sativa HOM05D003795 ORTHO05D004308 4.1e-47 193.7 664 33.1
Ca_05735_v3 Cicer arietinum L. HOM05D003795 ORTHO05D004308 5.3e-47 193.4 675 34.1
LjContig00141g0025814 Lotus japonicus HOM05D003795 ORTHO05D004308 5.3e-47 193.4 760 32.6
HanXRQChr14g0443551 Helianthus annuus HOM05D003795 ORTHO05D004308 2.6e-46 191.0 659 34.1
Aqoxy3G04352 Aquilegia oxysepala HOM05D003795 ORTHO05D004308 3.4e-46 190.7 693 32.5
arahy.Tifrunner.gnm1.ann1.SLU9BZ Arachis hypogaea HOM05D003795 ORTHO05D004308 1.3e-45 188.7 733 33.3
arahy.Tifrunner.gnm1.ann1.686QXT Arachis hypogaea HOM05D003795 ORTHO05D004308 1.7e-45 188.3 744 32.8
Ah.06g191370 Amaranthus hybridus HOM05D003795 ORTHO05D004308 2.5e-44 184.5 698 32.1
COL.COLO4_13440 Corchorus olitorius HOM05D003795 ORTHO05D004308 2.5e-44 184.5 653 33.4
Eucgr.J01649 Eucalyptus grandis HOM05D003795 ORTHO05D004308 3.2e-44 184.1 474 36.5
Lj6g0018352 Lotus japonicus HOM05D003795 ORTHO05D004308 1.6e-43 181.8 750 32.0
Psat2g048640 Pisum sativum HOM05D003795 ORTHO05D004308 2.7e-43 181.0 646 33.4
CANSAT78G1023 Cannabis sativa HOM05D003795 ORTHO05D004308 6.7e-42 176.4 620 31.9
Ah.04g162800 Amaranthus hybridus HOM05D003795 ORTHO05D004308 9.7e-41 172.6 726 31.7
PGR042G3398 Punica granatum HOM05D003795 ORTHO05D004308 1.7e-40 171.8 772 31.2
Dinv19094 Davidia involucrata HOM05D003795 ORTHO05D004308 4.1e-39 167.2 311 43.7
Medtr5g076140 Medicago truncatula HOM05D003795 ORTHO05D004308 2.0e-38 164.9 614 31.6
Os04g0528600 Oryza sativa ssp. japonica HOM05D003795 ORTHO05D004308 3.5e-38 164.1 537 36.3
TAR629G1700 Trochodendron aralioides HOM05D003795 ORTHO05D004308 1.7e-37 161.8 438 37.7
Sabra16G0322500 Salix brachista HOM05D003795 ORTHO05D004308 2.5e-36 157.9 336 41.4
unitig_748.g8624 Utricularia gibba HOM05D003795 ORTHO05D004308 7.2e-36 156.4 589 33.8
TPR.G15394 Trifolium pratense HOM05D003795 ORTHO05D004308 8.0e-35 152.9 542 34.3
Actinidia22883 Actinidia chinensis HOM05D003795 ORTHO05D004308 1.4e-34 152.1 683 30.3
ECA238G3337 Erigeron canadensis HOM05D003795 ORTHO05D004308 4.0e-34 150.6 726 30.0
AL2G22840 Arabidopsis lyrata HOM05D003795 ORTHO05D004308 1.5e-33 148.7 597 33.3
AUR62017269 Chenopodium quinoa HOM05D003795 ORTHO05D004308 2.6e-33 147.9 639 31.9
Atru.chr1.2190 Acer truncatum HOM05D003795 ORTHO05D004308 3.3e-33 147.5 654 31.0
Actinidia32996 Actinidia chinensis HOM05D003795 ORTHO05D004308 7.5e-33 146.4 424 35.6
Zm00001eb427110 Zea mays HOM05D003795 ORTHO05D004308 2.8e-32 144.4 527 33.2
Aa31LG2G10060 Aethionema arabicum HOM05D003795 ORTHO05D004308 4.8e-32 143.7 704 29.0
Aqoxy2G03712 Aquilegia oxysepala HOM05D003795 ORTHO05D004308 6.3e-32 143.3 226 46.5
AT5G37010 Arabidopsis thaliana HOM05D003795 ORTHO05D004308 1.4e-31 142.1 657 31.2
Sp5g20650 Schrenkiella parvula HOM05D003795 ORTHO05D004308 1.8e-31 141.7 572 30.2
Carub.0002s1153 Capsella rubella HOM05D003795 ORTHO05D004308 5.9e-30 136.7 606 32.0
HanXRQChr12g0365641 Helianthus annuus HOM05D003795 ORTHO05D004308 6.5e-29 133.3 645 30.7
AL7G45860 Arabidopsis lyrata HOM05D003795 ORTHO05D004308 8.5e-29 132.9 678 30.5
AT1G65710 Arabidopsis thaliana HOM05D003795 ORTHO05D004308 1.5e-28 132.1 597 32.2
CARHR216000 Cardamine hirsuta HOM05D003795 ORTHO05D004308 4.2e-28 130.6 721 30.4
Zm00001eb075920 Zea mays HOM05D003795 ORTHO05D004308 7.2e-28 129.8 537 32.0
Sp7g05490 Schrenkiella parvula HOM05D003795 ORTHO05D004308 1.2e-27 129.0 691 30.1
HPP92_013140 Vanilla planifolia HOM05D003795 ORTHO05D004308 6.8e-26 123.2 598 31.3
Thhalv10018468m.g Eutrema salsugineum HOM05D003795 ORTHO05D004308 1.2e-25 122.5 628 29.5
CARHR057540 Cardamine hirsuta HOM05D003795 ORTHO05D004308 2.0e-25 121.7 526 32.3
CDE08G0767 Ceratophyllum demersum HOM05D003795 ORTHO05D004308 4.4e-25 120.6 596 28.0
Carub.0007s3228 Capsella rubella HOM05D003795 ORTHO05D004308 9.8e-25 119.4 618 30.9
BcaB06g27061 Brassica carinata HOM05D003795 ORTHO05D004308 2.2e-24 118.2 629 30.2
AUR62010626 Chenopodium quinoa HOM05D003795 ORTHO05D004308 2.2e-24 118.2 208 44.7
Thhalv10018248m.g Eutrema salsugineum HOM05D003795 ORTHO05D004308 3.7e-24 117.5 679 30.0
Zm00001eb185660 Zea mays HOM05D003795 ORTHO05D004308 2.4e-23 114.8 530 30.6
Aa31LG9G17690 Aethionema arabicum HOM05D003795 ORTHO05D004308 9.1e-23 112.8 743 27.5
VMungo1215G2457 Vigna mungo HOM05D003795 ORTHO05D004308 1.0e-21 109.4 317 34.1
BcaC02g09547 Brassica carinata HOM05D003795 ORTHO05D004308 5.0e-21 107.1 689 29.5
CDE04G0398 Ceratophyllum demersum HOM05D003795 ORTHO05D004308 1.5e-20 105.5 718 27.4
CDE07G0419 Ceratophyllum demersum HOM05D003795 ORTHO05D004308 7.2e-20 103.2 514 27.2
Lsat_1_v5_gn_8_114961 Lactuca sativa HOM05D003795 ORTHO05D004308 8.0e-19 99.8 483 27.5
Oeu012503.1 Olea europaea HOM05D003795 ORTHO05D004308 8.0e-19 99.8 230 37.4
VMungo1383G0923 Vigna mungo HOM05D003795 ORTHO05D004308 5.2e-18 97.1 146 46.6
C04p43990 Brassica napus HOM05D003795 ORTHO05D004308 1.2e-17 95.9 695 29.1
MD12G1074700 Malus domestica HOM05D003795 ORTHO05D004308 2.6e-17 94.7 737 26.2
BolC4t25981H Brassica oleracea HOM05D003795 ORTHO05D004308 3.4e-17 94.4 686 28.9
A04p10490 Brassica napus HOM05D003795 ORTHO05D004308 7.5e-17 93.2 368 34.0
A08p00830 Brassica napus HOM05D003795 ORTHO05D004308 2.8e-16 91.3 444 30.6
BcaB04g16989 Brassica carinata HOM05D003795 ORTHO05D004308 1.1e-15 89.4 504 28.8
BcaC01g01477 Brassica carinata HOM05D003795 ORTHO05D004308 2.0e-14 85.1 447 30.9
C03p92420 Brassica napus HOM05D003795 ORTHO05D004308 2.0e-14 85.1 447 30.9
BolC3t21550H Brassica oleracea HOM05D003795 ORTHO05D004308 4.3e-12 77.4 436 29.4
Peaxi162Scf00559g00031 Petunia axillaris HOM05D003795 ORTHO05D004308 3.6e-11 74.3 523 26.0
AUR62010625 Chenopodium quinoa HOM05D003795 ORTHO05D004308 3.0e-10 71.2 186 36.0
ECA232G0457 Erigeron canadensis HOM05D003795 ORTHO05D004308 3.0e-10 71.2 126 41.3
BraA08t32141Z Brassica rapa HOM05D003795 ORTHO05D004308 2.6e-09 68.2 444 28.2
HanXRQChr09g0258951 Helianthus annuus HOM05D003795 ORTHO05D004308 5.7e-09 67.0 103 44.7
Sabra16G0322400 Salix brachista HOM05D003795 ORTHO05D004308 1.3e-08 65.9 140 40.7
SEGI_22138 Sequoiadendron giganteum HOM05D003795 ORTHO05D004308 4.9e-08 63.9 517 27.1
Prupe.7G058700 Prunus persica HOM05D003795 ORTHO05D004308 1.1e-07 62.8 374 27.0
ATR0124G054 Amborella trichopoda HOM05D003795 ORTHO05D004308 2.4e-07 61.6 490 25.7
Os02g0638200 Oryza sativa ssp. japonica HOM05D003795 ORTHO05D004308 2.4e-07 61.6 246 30.1
Lalb_Chr10g0103891 Lupinus albus HOM05D003795 ORTHO05D004308 4.1e-07 60.8 411 28.5
Peaxi162Scf00036g00224 Petunia axillaris HOM05D002102 ORTHO05D004119 9.2e-07 59.7 147 40.1
BcaB05g24123 Brassica carinata HOM05D003795 ORTHO05D004308 7.8e-06 56.6 336 28.0


User provided reference genes

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