Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008075g0040 Nicotiana tabacum HOM05D002857 ORTHO05D008347 1.0e-90 336.7 165 100.0
Nitab4.5_0001105g0010 Nicotiana tabacum HOM05D002857 ORTHO05D008347 2.9e-85 318.5 161 95.7
Peaxi162Scf00016g02839 Petunia axillaris HOM05D002857 ORTHO05D008347 1.1e-84 316.6 165 92.7
Solyc01g107020.4 Solanum lycopersicum HOM05D002857 ORTHO05D008347 7.2e-84 313.9 165 91.5
CAN.G606.59 Capsicum annuum HOM05D002857 ORTHO05D008347 2.1e-83 312.4 165 90.9
Sopen01g049290 Solanum pennellii HOM05D002857 ORTHO05D008347 4.7e-83 311.2 165 90.9
PGSC0003DMG400025744 Solanum tuberosum HOM05D002857 ORTHO05D008347 2.4e-79 298.9 158 91.8
Dinv15807 Davidia involucrata HOM05D002857 ORTHO05D008347 4.0e-74 281.6 165 80.0
Oeu010450.1 Olea europaea HOM05D002857 ORTHO05D008347 1.5e-73 279.6 161 82.0
QL07p014115 Quercus lobata HOM05D002857 ORTHO05D008347 3.4e-73 278.5 163 79.8
Sabra09G0068300 Salix brachista HOM05D002857 ORTHO05D008347 3.4e-73 278.5 165 78.2
Potri.009G088200 Populus trichocarpa HOM05D002857 ORTHO05D008347 4.4e-73 278.1 165 78.2
GSVIVG01037837001 Vitis vinifera HOM05D002857 ORTHO05D008347 5.7e-73 277.7 165 80.0
CiPaw.06G165500 Carya illinoinensis HOM05D002857 ORTHO05D008347 1.3e-72 276.6 165 77.6
Haze_10256 Corylus avellana HOM05D002857 ORTHO05D008347 1.3e-72 276.6 161 80.1
vmacro19465 Vaccinium macrocarpon HOM05D002857 ORTHO05D008347 1.3e-72 276.6 161 78.3
vmacro23229 Vaccinium macrocarpon HOM05D002857 ORTHO05D008347 1.3e-72 276.6 161 78.3
CSS0041876 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D008347 2.8e-72 275.4 161 79.5
Cfa009507 Carpinus fangiana HOM05D002857 ORTHO05D008347 1.1e-71 273.5 161 78.9
CiPaw.05G017800 Carya illinoinensis HOM05D002857 ORTHO05D008347 1.1e-71 273.5 165 77.0
Manes.10G081600 Manihot esculenta HOM05D002857 ORTHO05D008347 1.4e-71 273.1 165 75.8
Actinidia34361 Actinidia chinensis HOM05D002857 ORTHO05D008347 2.4e-71 272.3 165 76.4
MSTRG.27764 Avicennia marina HOM05D002857 ORTHO05D008347 3.1e-71 271.9 161 78.9
Atru.chr5.2351 Acer truncatum HOM05D002857 ORTHO05D008347 4.1e-71 271.6 165 75.2
Cfa004654 Carpinus fangiana HOM05D002857 ORTHO05D008347 7.0e-71 270.8 161 77.6
Lj5A219T41 Lonicera japonica HOM05D002857 ORTHO05D008347 7.0e-71 270.8 162 75.3
Duzib132G1128 Durio zibethinus HOM05D002857 ORTHO05D008347 1.6e-70 269.6 165 76.4
Prupe.8G144800 Prunus persica HOM05D002857 ORTHO05D008347 2.0e-70 269.2 161 77.6
Eucgr.I01062 Eucalyptus grandis HOM05D002857 ORTHO05D008347 4.5e-70 268.1 165 75.8
Hund00691 Selenicereus undatus HOM05D002857 ORTHO05D008347 4.5e-70 268.1 162 75.3
CANSAT35G0667 Cannabis sativa HOM05D002857 ORTHO05D008347 7.7e-70 267.3 162 77.8
Glyma.17G078200 Glycine max HOM05D002857 ORTHO05D008347 7.7e-70 267.3 161 77.0
Cpa.g.sc106.48 Carica papaya HOM05D002857 ORTHO05D008347 1.0e-69 266.9 161 76.4
Phvul.003G185000 Phaseolus vulgaris HOM05D002857 ORTHO05D008347 1.0e-69 266.9 161 77.6
Ciclev10029201m.g Citrus clementina HOM05D002857 ORTHO05D008347 1.3e-69 266.5 165 72.7
MD05G1100100 Malus domestica HOM05D002857 ORTHO05D008347 1.3e-69 266.5 161 75.2
PGR120G0011 Punica granatum HOM05D002857 ORTHO05D008347 1.3e-69 266.5 165 75.8
TPR.G2009 Trifolium pratense HOM05D002857 ORTHO05D008347 1.7e-69 266.2 165 75.8
COL.COLO4_32514 Corchorus olitorius HOM05D002857 ORTHO05D007919 2.3e-69 265.8 165 75.8
Gohir.D12G019900 Gossypium hirsutum HOM05D002857 ORTHO05D008347 2.3e-69 265.8 165 75.8
SGA_v2.0_scaffold219G42527 Striga asiatica HOM05D002857 ORTHO05D008347 2.3e-69 265.8 163 75.5
PGR142G0748 Punica granatum HOM05D002857 ORTHO05D008347 2.9e-69 265.4 161 77.0
Gorai.008G020300 Gossypium raimondii HOM05D002857 ORTHO05D008347 3.8e-69 265.0 165 75.2
RcHm_v2.0_Chr6g0253801 Rosa chinensis HOM05D002857 ORTHO05D008347 3.8e-69 265.0 165 73.9
Nn5g30580 Nelumbo nucifera HOM05D002857 ORTHO05D008347 5.0e-69 264.6 165 76.4
EL10Ac9g22202 Beta vulgaris HOM05D002857 ORTHO05D008347 6.6e-69 264.2 163 73.6
AUR62027003 Chenopodium quinoa HOM05D002857 ORTHO05D008347 6.6e-69 264.2 163 73.0
TWI14G1023 Tripterygium wilfordii HOM05D002857 ORTHO05D008347 8.6e-69 263.8 159 77.4
Gohir.A12G019700 Gossypium hirsutum HOM05D002857 ORTHO05D008347 1.1e-68 263.5 161 77.0
Psat0s3618g0120 Pisum sativum HOM05D002857 ORTHO05D008347 1.1e-68 263.5 165 74.5
Cc02_g19860 Coffea canephora HOM05D002857 ORTHO05D008347 1.5e-68 263.1 163 73.6
MD05G1100400 Malus domestica HOM05D002857 ORTHO05D008347 1.9e-68 262.7 161 73.9
TAR381G0590 Trochodendron aralioides HOM05D002857 ORTHO05D008347 1.9e-68 262.7 165 75.2
Cfa010108 Carpinus fangiana HOM05D002857 ORTHO05D008347 3.3e-68 261.9 163 76.7
Lalb_Chr06g0165111 Lupinus albus HOM05D002857 ORTHO05D008347 4.3e-68 261.5 164 74.4
FvH4_2g04342 Fragaria vesca HOM05D002857 ORTHO05D008347 9.5e-68 260.4 163 74.2
CsaV3_4G000220 Cucumis sativus L. HOM05D002857 ORTHO05D008347 1.2e-67 260.0 162 75.3
Medtr4g109520 Medicago truncatula HOM05D002857 ORTHO05D008347 1.2e-67 260.0 165 73.9
Potri.001G293700 Populus trichocarpa HOM05D002857 ORTHO05D008347 1.6e-67 259.6 165 73.3
Ca_21777_v3 Cicer arietinum L. HOM05D002857 ORTHO05D008347 2.1e-67 259.2 162 75.9
MELO3C018011.2 Cucumis melo HOM05D002857 ORTHO05D008347 3.6e-67 258.5 164 73.8
Migut.O00567 Erythranthe guttata HOM05D002857 ORTHO05D008347 4.7e-67 258.1 161 73.3
Migut.N01136 Erythranthe guttata HOM05D002857 ORTHO05D008347 8.0e-67 257.3 161 73.3
Thecc.02G117000 Theobroma cacao HOM05D002857 ORTHO05D008347 1.4e-66 256.5 158 75.3
ClCG10G010270 Citrullus lanatus HOM05D002857 ORTHO05D008347 1.8e-66 256.1 161 74.5
Lj4g0011899 Lotus japonicus HOM05D002857 ORTHO05D008347 1.8e-66 256.1 161 72.7
Aqoxy6G02637 Aquilegia oxysepala HOM05D002857 ORTHO05D008347 3.0e-66 255.4 161 75.2
Sed0016408 Sechium edule HOM05D002857 ORTHO05D008347 4.0e-66 255.0 164 73.2
Lsat_1_v5_gn_1_103341 Lactuca sativa HOM05D002857 ORTHO05D008347 6.8e-66 254.2 161 73.3
SalBow3G3786 Salvia bowleyana HOM05D002857 ORTHO05D008347 4.4e-65 251.5 164 72.0
HanXRQChr01g0025491 Helianthus annuus HOM05D002857 ORTHO05D008347 7.5e-65 250.8 161 72.7
VMungo1215G1881 Vigna mungo HOM05D002857 ORTHO05D008347 1.3e-64 250.0 154 76.0
PSO541G0380 Papaver somniferum HOM05D002857 ORTHO05D008347 6.4e-64 247.7 165 69.7
Rhsim11G0151500 Rhododendron simsii HOM05D002133 ORTHO05D008347 6.4e-64 247.7 156 72.4
Rhsim11G0152900 Rhododendron simsii HOM05D002133 ORTHO05D008347 6.4e-64 247.7 156 72.4
DCAR_001699 Daucus carota HOM05D002857 ORTHO05D008347 1.8e-63 246.1 165 68.5
CDE04G2041 Ceratophyllum demersum HOM05D002857 ORTHO05D008347 5.4e-63 244.6 161 70.2
unitig_749.g13509 Utricularia gibba HOM05D002857 ORTHO05D008347 7.0e-63 244.2 159 71.1
PSO675G0546 Papaver somniferum HOM05D002857 ORTHO05D008347 3.5e-62 241.9 165 68.5
Nn3g19581 Nelumbo nucifera HOM05D002857 ORTHO05D008347 1.5e-60 236.5 165 70.3
Ah.01g006980 Amaranthus hybridus HOM05D002857 ORTHO05D008347 7.5e-57 224.2 140 71.4
HPP92_003268 Vanilla planifolia HOM05D002857 ORTHO05D008347 1.3e-56 223.4 163 65.6
Carub.0001s3918 Capsella rubella HOM05D002857 ORTHO05D008347 1.7e-56 223.0 161 62.7
FAN24G3287 Fragaria x ananassa HOM05D001904 ORTHO05D008347 3.7e-56 221.9 159 67.3
BcaC08g43176 Brassica carinata HOM05D002857 ORTHO05D007919 6.4e-56 221.1 161 62.7
A06p03450 Brassica napus HOM05D002857 ORTHO05D008347 6.4e-56 221.1 161 62.7
C06p04760 Brassica napus HOM05D002857 ORTHO05D008347 6.4e-56 221.1 161 62.7
BolC6t35606H Brassica oleracea HOM05D002857 ORTHO05D008347 6.4e-56 221.1 161 62.7
BraA06t23553Z Brassica rapa HOM05D002857 ORTHO05D008347 6.4e-56 221.1 161 62.7
Thhalv10011799m.g Eutrema salsugineum HOM05D002857 ORTHO05D008347 1.4e-55 219.9 161 62.1
BcaB07g33450 Brassica carinata HOM05D002857 ORTHO05D007919 2.4e-55 219.2 161 62.1
AL1G57550 Arabidopsis lyrata HOM05D002857 ORTHO05D008347 7.0e-55 217.6 157 62.4
SpUn0137_0020 Schrenkiella parvula HOM05D002857 ORTHO05D008347 2.7e-54 215.7 161 62.1
Aa31LG10G4120 Aethionema arabicum HOM05D002857 ORTHO05D008347 3.5e-54 215.3 161 60.2
THA.LOC104803442 Tarenaya hassleriana HOM05D002857 ORTHO05D008347 1.7e-53 213.0 163 62.0
Os10g0350800 Oryza sativa ssp. japonica HOM05D002857 ORTHO05D008347 7.3e-52 207.6 175 56.6
Zm00001eb019030 Zea mays HOM05D002857 ORTHO05D008347 1.8e-50 203.0 164 59.1
SMO361G0227 Selaginella moellendorffii HOM05D002857 ORTHO05D008347 1.4e-47 193.4 161 55.9
ECA234G2213 Erigeron canadensis HOM05D002857 ORTHO05D008347 7.1e-47 191.0 122 71.3
Ciclev10007042m.g Citrus clementina HOM05D002857 ORTHO05D008347 3.9e-45 185.3 145 58.6
Oeu010448.1 Olea europaea HOM05D002857 ORTHO05D008347 3.3e-44 182.2 112 79.5
AagrBONN_evm.TU.Sc2ySwM_228.4585 Anthoceros agrestis HOM05D002857 ORTHO05D008347 5.2e-42 174.9 161 52.2
arahy.Tifrunner.gnm1.ann1.9CW0PF Arachis hypogaea HOM05D002857 ORTHO05D008347 9.9e-41 170.6 112 76.8
arahy.Tifrunner.gnm1.ann1.AK2UKD Arachis hypogaea HOM05D002857 ORTHO05D008347 8.4e-40 167.5 109 77.1
arahy.Tifrunner.gnm1.ann1.JJ1SBB Arachis hypogaea HOM05D002857 ORTHO05D008347 8.4e-40 167.5 111 74.8
Pp3c5_10320 Physcomitrium patens HOM05D002857 ORTHO05D008347 8.4e-40 167.5 164 50.0
Glyma.05G021200 Glycine max HOM05D002857 ORTHO05D008347 1.9e-39 166.4 108 74.1
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 9.2e-39 164.1 110 72.7
Mapoly0121s0028 Marchantia polymorpha HOM05D002857 ORTHO05D008347 1.0e-37 160.6 164 47.0
Ciclev10006219m.g Citrus clementina HOM05D002857 ORTHO05D008347 4.0e-34 148.7 106 67.9
Rhsim11G0151300 Rhododendron simsii HOM05D002133 ORTHO05D002256 4.0e-34 148.7 90 73.3
CBR_g3894 Chara braunii HOM05D002857 ORTHO05D008347 3.8e-32 142.1 127 55.1
SEGI_03434 Sequoiadendron giganteum HOM05D002857 ORTHO05D008347 2.2e-24 116.3 113 51.3
Cre05.g247150 Chlamydomonas reinhardtii HOM05D002857 ORTHO05D008347 1.6e-22 110.2 195 31.8
MCO12G139 Micromonas commoda HOM05D002857 ORTHO05D008347 3.5e-22 109.0 161 38.5
QL11p030572 Quercus lobata HOM05D002857 ORTHO05D008347 3.3e-20 102.4 53 79.2
PRCOL_00006372 Prasinoderma coloniale HOM05D002857 ORTHO05D008347 2.1e-19 99.8 160 35.6
AUR62030843 Chenopodium quinoa HOM05D002857 ORTHO05D008347 1.4e-18 97.1 56 73.2
Cfa021534 Carpinus fangiana HOM05D002857 ORTHO05D008347 1.8e-18 96.7 55 72.7
Sc18g0007410 Simmondsia chinensis HOM05D002857 ORTHO05D008347 9.9e-17 90.9 58 70.7
Sc18g0007450 Simmondsia chinensis HOM05D002857 ORTHO05D008347 9.9e-17 90.9 58 70.7
CARHR040040 Cardamine hirsuta HOM05D002857 ORTHO05D008347 2.5e-12 76.3 58 58.6
Nn5g29163 Nelumbo nucifera HOM05D002857 ORTHO05D008347 7.1e-07 58.2 38 73.7
Sabra16G0183400 Salix brachista HOM05D002857 ORTHO05D008347 6.0e-06 55.1 42 64.3


User provided reference genes

Program Settings