Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008075g0020 Nicotiana tabacum HOM05D007107 ORTHO05D009198 2.2e-41 171.8 83 100.0
Nitab4.5_0001105g0070 Nicotiana tabacum HOM05D007107 ORTHO05D009198 2.7e-39 164.9 81 96.3
Peaxi162Scf00016g02820 Petunia axillaris HOM05D007107 ORTHO05D009198 3.8e-33 144.4 81 82.7
Solyc01g107090.2 Solanum lycopersicum HOM05D007107 ORTHO05D009198 2.5e-32 141.7 82 82.9
Sopen01g049360 Solanum pennellii HOM05D007107 ORTHO05D009198 2.5e-32 141.7 82 82.9
Sopen01g049370 Solanum pennellii HOM05D007107 ORTHO05D009198 6.1e-31 137.1 79 84.8
Solyc01g107100.3 Solanum lycopersicum HOM05D007107 ORTHO05D009198 8.8e-30 133.3 79 82.3
PGSC0003DMG400042480 Solanum tuberosum HOM05D007107 ORTHO05D009198 3.1e-27 124.8 78 75.6
PGSC0003DMG400025844 Solanum tuberosum HOM05D007107 ORTHO05D009198 1.7e-25 119.0 71 81.7
PGSC0003DMG400025747 Solanum tuberosum HOM05D007107 ORTHO05D009198 2.7e-23 111.7 68 80.9
PGR042G2158 Punica granatum HOM05D007107 ORTHO05D009198 2.2e-20 102.1 70 65.7
Oeu010443.1 Olea europaea HOM05D007107 ORTHO05D009198 2.4e-19 98.6 64 78.1
TAR628G1630 Trochodendron aralioides HOM05D007107 ORTHO05D009198 1.6e-18 95.9 64 76.6
Oeu009671.1 Olea europaea HOM05D007107 ORTHO05D009198 4.5e-18 94.4 86 61.6
CSS0046981 Camellia sinensis var. sinensis HOM05D007107 ORTHO05D009198 7.7e-18 93.6 78 64.1
Glyma.10G257200 Glycine max HOM05D007107 ORTHO05D009198 1.3e-17 92.8 66 66.7
Glyma.20G134000 Glycine max HOM05D007107 ORTHO05D009198 3.8e-17 91.3 66 65.2
Gohir.A13G046600 Gossypium hirsutum HOM05D007107 ORTHO05D009198 6.5e-17 90.5 91 57.1
Thecc.02G116600 Theobroma cacao HOM05D007107 ORTHO05D009198 1.1e-16 89.7 90 55.6
TPR.G27135 Trifolium pratense HOM05D007107 ORTHO05D009198 4.2e-16 87.8 67 62.7
CSS0000313 Camellia sinensis var. sinensis HOM05D007107 ORTHO05D009198 5.5e-16 87.4 67 65.7
Phvul.007G045200 Phaseolus vulgaris HOM05D007107 ORTHO05D009198 5.5e-16 87.4 62 67.7
Ciclev10029615m.g Citrus clementina HOM05D007107 ORTHO05D009198 7.2e-16 87.0 62 67.7
Duzib248G0083 Durio zibethinus HOM05D007107 ORTHO05D009198 9.4e-16 86.7 91 52.7
Atru.chr5.2359 Acer truncatum HOM05D007107 ORTHO05D009198 1.2e-15 86.3 61 65.6
Cfa004630 Carpinus fangiana HOM05D007107 ORTHO05D009198 1.2e-15 86.3 64 62.5
Gohir.D13G042600 Gossypium hirsutum HOM05D007107 ORTHO05D009198 1.2e-15 86.3 91 56.0
Gorai.013G050500 Gossypium raimondii HOM05D007107 ORTHO05D009198 1.2e-15 86.3 91 56.0
Manes.07G058800 Manihot esculenta HOM05D007107 ORTHO05D009198 1.2e-15 86.3 65 70.8
RcHm_v2.0_Chr6g0253681 Rosa chinensis HOM05D007107 ORTHO05D009198 1.2e-15 86.3 80 58.8
Cc02_g19820 Coffea canephora HOM05D007107 ORTHO05D009198 2.1e-15 85.5 94 52.1
Duzib132G0703 Durio zibethinus HOM05D007107 ORTHO05D009198 2.1e-15 85.5 91 53.8
Psat6g214960 Pisum sativum HOM05D007107 ORTHO05D009198 2.1e-15 85.5 67 62.7
Prupe.8G144000 Prunus persica HOM05D007107 ORTHO05D009198 2.1e-15 85.5 62 71.0
TAR376G0510 Trochodendron aralioides HOM05D007107 ORTHO05D009198 2.1e-15 85.5 55 72.7
Medtr1g106215 Medicago truncatula HOM05D007107 ORTHO05D009198 2.7e-15 85.1 67 62.7
Ca_11033_v3 Cicer arietinum L. HOM05D007107 ORTHO05D009198 3.6e-15 84.7 88 52.3
Gohir.D12G020100 Gossypium hirsutum HOM05D007107 ORTHO05D009198 3.6e-15 84.7 78 57.7
Gorai.008G020500 Gossypium raimondii HOM05D007107 ORTHO05D009198 3.6e-15 84.7 78 57.7
EL10Ac8g19388 Beta vulgaris HOM05D007107 ORTHO05D009198 4.7e-15 84.3 63 61.9
COL.COLO4_32518 Corchorus olitorius HOM05D007107 ORTHO05D009198 4.7e-15 84.3 70 62.9
Duzib248G0453 Durio zibethinus HOM05D000446 ORTHO05D000321 4.7e-15 84.3 91 51.6
MD10G1105100 Malus domestica HOM05D007107 ORTHO05D009198 4.7e-15 84.3 60 70.0
Ah.09g231830 Amaranthus hybridus HOM05D007107 ORTHO05D009198 8.0e-15 83.6 61 60.7
Lalb_Chr06g0165131 Lupinus albus HOM05D007107 ORTHO05D009198 8.0e-15 83.6 66 59.1
Sc08g0004510 Simmondsia chinensis HOM05D007107 ORTHO05D009198 8.0e-15 83.6 85 54.1
Migut.B00446 Erythranthe guttata HOM05D007107 ORTHO05D009198 1.0e-14 83.2 70 61.4
QL11p022494 Quercus lobata HOM05D007107 ORTHO05D009198 1.4e-14 82.8 72 55.6
Gohir.A12G019900 Gossypium hirsutum HOM05D007107 ORTHO05D009198 1.8e-14 82.4 78 56.4
DCAR_001690 Daucus carota HOM05D007107 ORTHO05D009198 2.3e-14 82.0 63 68.3
Lsat_1_v5_gn_9_111721 Lactuca sativa HOM05D007107 ORTHO05D009198 2.3e-14 82.0 83 55.4
Haze_10225 Corylus avellana HOM05D007107 ORTHO05D009198 3.0e-14 81.6 67 61.2
Lj5g0011883 Lotus japonicus HOM05D007107 ORTHO05D009198 3.0e-14 81.6 68 61.8
RcHm_v2.0_Chr6g0253721 Rosa chinensis HOM05D007107 ORTHO05D009198 3.0e-14 81.6 81 56.8
Potri.001G294800 Populus trichocarpa HOM05D007107 ORTHO05D009198 5.2e-14 80.9 80 57.5
Rhsim11G0151000 Rhododendron simsii HOM05D007107 ORTHO05D009198 5.2e-14 80.9 82 58.5
Cpa.g.sc106.53 Carica papaya HOM05D007107 ORTHO05D009198 8.8e-14 80.1 95 46.3
Oeu011135.1 Olea europaea HOM05D007107 ORTHO05D009198 8.8e-14 80.1 66 65.2
CiPaw.05G017500 Carya illinoinensis HOM05D007107 ORTHO05D009198 1.5e-13 79.3 65 64.6
FAN15G2005 Fragaria x ananassa HOM05D007107 ORTHO05D025431 3.4e-13 78.2 80 56.2
Nn5g30571 Nelumbo nucifera HOM05D007107 ORTHO05D009198 5.7e-13 77.4 71 59.2
FAN20G1224 Fragaria x ananassa HOM05D007107 ORTHO05D009198 1.7e-12 75.9 83 53.0
Hma1.2p1_1773F.1_g301790 Hydrangea macrophylla HOM05D007107 ORTHO05D009198 2.2e-12 75.5 84 52.4
Rhsim11G0153200 Rhododendron simsii HOM05D007107 ORTHO05D009198 2.2e-12 75.5 60 66.7
Aqoxy5G00877 Aquilegia oxysepala HOM05D007107 ORTHO05D009198 2.8e-12 75.1 67 62.7
MELO3C018001.2 Cucumis melo HOM05D007107 ORTHO05D009198 2.8e-12 75.1 68 57.4
Thhalv10021824m.g Eutrema salsugineum HOM05D007107 ORTHO05D009198 2.8e-12 75.1 69 53.6
CsaV3_4G000330 Cucumis sativus L. HOM05D007107 ORTHO05D009198 6.3e-12 73.9 76 51.3
Eucgr.G01220 Eucalyptus grandis HOM05D007107 ORTHO05D009198 6.3e-12 73.9 78 47.4
ClCG10G010430 Citrullus lanatus HOM05D007107 ORTHO05D009198 1.1e-11 73.2 62 59.7
A03p41330 Brassica napus HOM05D007107 ORTHO05D009198 1.4e-11 72.8 69 52.2
BraA03t13287Z Brassica rapa HOM05D007107 ORTHO05D009198 1.4e-11 72.8 69 52.2
Lsat_1_v5_gn_5_114201 Lactuca sativa HOM05D007107 ORTHO05D009198 2.4e-11 72.0 77 51.9
ECA234G2040 Erigeron canadensis HOM05D007107 ORTHO05D009198 4.1e-11 71.2 78 52.6
BcaC09g48926 Brassica carinata HOM05D007107 ORTHO05D009198 5.4e-11 70.9 76 48.7
C01p44500 Brassica napus HOM05D007107 ORTHO05D009198 5.4e-11 70.9 76 48.7
BolC1t04415H Brassica oleracea HOM05D007107 ORTHO05D009198 5.4e-11 70.9 76 48.7
FvH4_2g04290 Fragaria vesca HOM05D007107 ORTHO05D009198 5.4e-11 70.9 80 52.5
FAN24G0068 Fragaria x ananassa HOM05D007107 ORTHO05D009198 5.4e-11 70.9 80 52.5
AL3G33050 Arabidopsis lyrata HOM05D007107 ORTHO05D009198 9.1e-11 70.1 66 53.0
CANSAT25G2317 Cannabis sativa HOM05D007107 ORTHO05D009198 9.1e-11 70.1 77 51.9
BcaC01g03614 Brassica carinata HOM05D007107 ORTHO05D009198 1.6e-10 69.3 69 50.7
A01p35080 Brassica napus HOM05D007107 ORTHO05D009198 1.6e-10 69.3 69 50.7
C03p50490 Brassica napus HOM05D007107 ORTHO05D009198 1.6e-10 69.3 69 50.7
BraA01t03589Z Brassica rapa HOM05D007107 ORTHO05D009198 1.6e-10 69.3 69 50.7
Ah.14g085610 Amaranthus hybridus HOM05D007107 ORTHO05D009198 2.7e-10 68.6 63 55.6
AT3G19615 Arabidopsis thaliana HOM05D007107 ORTHO05D009198 3.5e-10 68.2 66 53.0
BcaB04g20690 Brassica carinata HOM05D007107 ORTHO05D009198 3.5e-10 68.2 73 49.3
BolC3t17339H Brassica oleracea HOM05D007107 ORTHO05D009198 4.5e-10 67.8 70 50.0
Carub.0003s1948 Capsella rubella HOM05D007107 ORTHO05D009198 5.9e-10 67.4 69 50.7
CARHR095070 Cardamine hirsuta HOM05D007107 ORTHO05D009198 5.9e-10 67.4 71 47.9
MBI16_g29126_MAGBIO Magnolia biondii HOM05D007107 ORTHO05D009198 1.3e-09 66.2 74 54.1
CiPaw.06G165600 Carya illinoinensis HOM05D007107 ORTHO05D009198 2.2e-09 65.5 60 61.7
SalBow6G0491 Salvia bowleyana HOM05D007107 ORTHO05D009198 3.8e-09 64.7 64 56.2
Sed0004586 Sechium edule HOM05D007107 ORTHO05D009198 5.0e-09 64.3 58 58.6
Oeu008318.1 Olea europaea HOM05D007107 ORTHO05D009198 1.1e-08 63.2 56 66.1
Sed0023372 Sechium edule HOM05D007107 ORTHO05D009198 1.5e-08 62.8 56 58.9
BcaB04g19054 Brassica carinata HOM05D007107 ORTHO05D009198 9.4e-08 60.1 64 50.0
ECA240G1449 Erigeron canadensis HOM05D007107 ORTHO05D009198 2.1e-07 58.9 49 63.3
RcHm_v2.0_Chr6g0253731 Rosa chinensis HOM05D007107 ORTHO05D025431 2.7e-07 58.5 79 39.2
Lalb_Chr25g0278741 Lupinus albus HOM05D007107 ORTHO05D009198 1.4e-06 56.2 54 53.7
unitig_27.g25075 Utricularia gibba HOM05D007107 ORTHO05D009198 5.2e-06 54.3 51 60.8
C05p45210 Brassica napus HOM05D007107 ORTHO05D009198 6.8e-06 53.9 69 44.9


User provided reference genes

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