Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008073g0030 Nicotiana tabacum HOM05D003943 ORTHO05D004753 1.3e-140 503.1 261 100.0
Sopen09g036280 Solanum pennellii HOM05D003943 ORTHO05D004753 2.2e-135 485.7 261 94.6
PGSC0003DMG400021625 Solanum tuberosum HOM05D003943 ORTHO05D004753 6.4e-135 484.2 261 94.3
Dinv20358 Davidia involucrata HOM05D003943 ORTHO05D004753 1.9e-131 472.6 261 90.8
MELO3C024586.2 Cucumis melo HOM05D003943 ORTHO05D004753 7.3e-131 470.7 261 90.8
Lsat_1_v5_gn_4_88760 Lactuca sativa HOM05D003943 ORTHO05D004753 7.3e-131 470.7 261 90.0
CSS0000599 Camellia sinensis var. sinensis HOM05D003943 ORTHO05D004753 1.6e-130 469.5 258 91.9
Lj6A21G25 Lonicera japonica HOM05D003943 ORTHO05D004753 1.6e-130 469.5 261 89.3
MSTRG.10894 Avicennia marina HOM05D003943 ORTHO05D004753 2.8e-130 468.8 261 90.0
Nn2g14305 Nelumbo nucifera HOM05D003943 ORTHO05D004753 2.8e-130 468.8 261 90.8
Lsat_1_v5_gn_6_32361 Lactuca sativa HOM05D003943 ORTHO05D004753 3.6e-130 468.4 260 90.0
Sabra16G0070600 Salix brachista HOM05D003943 ORTHO05D004753 3.6e-130 468.4 261 90.8
Sabra16G0072800 Salix brachista HOM05D003943 ORTHO05D004753 3.6e-130 468.4 261 90.8
TAR623G0676 Trochodendron aralioides HOM05D003943 ORTHO05D004753 3.6e-130 468.4 261 89.7
Oeu049654.1 Olea europaea HOM05D003943 ORTHO05D004753 4.7e-130 468.0 261 89.7
Actinidia38793 Actinidia chinensis HOM05D003943 ORTHO05D004753 6.2e-130 467.6 261 90.0
CsaV3_6G041100 Cucumis sativus L. HOM05D003943 ORTHO05D004753 8.1e-130 467.2 261 90.4
Lj6A3G40 Lonicera japonica HOM05D003943 ORTHO05D004753 8.1e-130 467.2 260 89.2
Potri.016G070400 Populus trichocarpa HOM05D003943 ORTHO05D004753 1.1e-129 466.8 261 90.0
TAR633G0404 Trochodendron aralioides HOM05D003943 ORTHO05D004753 1.1e-129 466.8 261 89.7
CiPaw.10G017400 Carya illinoinensis HOM05D003943 ORTHO05D004753 1.4e-129 466.5 261 90.0
ClCG01G015010 Citrullus lanatus HOM05D003943 ORTHO05D004753 1.4e-129 466.5 261 90.0
unitig_32.g11085 Utricularia gibba HOM05D003943 ORTHO05D004753 1.4e-129 466.5 260 90.4
Actinidia21868 Actinidia chinensis HOM05D003943 ORTHO05D004753 1.8e-129 466.1 261 89.3
Manes.01G025400 Manihot esculenta HOM05D003943 ORTHO05D004753 1.8e-129 466.1 261 89.3
vmacro18760 Vaccinium macrocarpon HOM05D003943 ORTHO05D004753 2.3e-129 465.7 265 88.3
Manes.08G033500 Manihot esculenta HOM05D003943 ORTHO05D004753 4.0e-129 464.9 261 88.9
Prupe.4G241300 Prunus persica HOM05D003943 ORTHO05D004753 4.0e-129 464.9 261 88.9
Haze_03432 Corylus avellana HOM05D003943 ORTHO05D004753 6.8e-129 464.2 261 89.3
Haze_20185 Corylus avellana HOM05D003943 ORTHO05D004753 6.8e-129 464.2 261 89.3
Oeu039454.1 Olea europaea HOM05D003943 ORTHO05D004753 6.8e-129 464.2 260 89.6
Potri.006G203400 Populus trichocarpa HOM05D003943 ORTHO05D004753 6.8e-129 464.2 261 90.0
GSVIVG01011153001 Vitis vinifera HOM05D003943 ORTHO05D004753 8.9e-129 463.8 260 90.0
Rhsim08G0248000 Rhododendron simsii HOM05D003943 ORTHO05D004753 1.2e-128 463.4 261 87.7
Ciclev10012509m.g Citrus clementina HOM05D003943 ORTHO05D004753 1.5e-128 463.0 261 90.0
Gohir.A09G134200 Gossypium hirsutum HOM05D003943 ORTHO05D004753 1.5e-128 463.0 261 88.9
Gorai.006G149400 Gossypium raimondii HOM05D003943 ORTHO05D004753 1.5e-128 463.0 261 88.9
Migut.I01176 Erythranthe guttata HOM05D003943 ORTHO05D004753 2.0e-128 462.6 261 88.9
Hund10875 Selenicereus undatus HOM05D003943 ORTHO05D004753 2.0e-128 462.6 261 89.7
THA.LOC104826802 Tarenaya hassleriana HOM05D003943 ORTHO05D004753 2.0e-128 462.6 261 90.0
TWI77G0554 Tripterygium wilfordii HOM05D003943 ORTHO05D004753 2.0e-128 462.6 261 88.9
Sed0023950 Sechium edule HOM05D003943 ORTHO05D004753 2.6e-128 462.2 261 89.3
Atru.chr12.911 Acer truncatum HOM05D003943 ORTHO05D004753 3.4e-128 461.8 261 89.7
Atru.chr8.1362 Acer truncatum HOM05D003943 ORTHO05D004753 3.4e-128 461.8 261 89.7
THA.LOC104809953 Tarenaya hassleriana HOM05D003943 ORTHO05D004753 4.4e-128 461.5 261 89.7
Gohir.D01G191300 Gossypium hirsutum HOM05D003943 ORTHO05D004753 5.8e-128 461.1 261 88.1
Gorai.002G235200 Gossypium raimondii HOM05D003943 ORTHO05D004753 5.8e-128 461.1 261 88.1
Sed0024685 Sechium edule HOM05D003943 ORTHO05D004753 5.8e-128 461.1 261 88.9
TWI74G1172 Tripterygium wilfordii HOM05D003943 ORTHO05D004753 5.8e-128 461.1 261 88.5
HanXRQChr09g0277391 Helianthus annuus HOM05D003943 ORTHO05D004753 7.6e-128 460.7 261 88.9
Duzib093G1950 Durio zibethinus HOM05D003943 ORTHO05D004753 9.9e-128 460.3 261 88.9
HanXRQChr17g0533251 Helianthus annuus HOM05D003943 ORTHO05D004753 1.7e-127 459.5 261 88.5
CANSAT64G2459 Cannabis sativa HOM05D003943 ORTHO05D004753 3.7e-127 458.4 261 87.0
Cfa010504 Carpinus fangiana HOM05D003943 ORTHO05D004753 3.7e-127 458.4 261 87.7
Lalb_Chr11g0067891 Lupinus albus HOM05D003943 ORTHO05D004753 3.7e-127 458.4 261 88.1
PGR004G2105 Punica granatum HOM05D003943 ORTHO05D004753 3.7e-127 458.4 261 88.5
PGR142G4032 Punica granatum HOM05D003943 ORTHO05D004753 3.7e-127 458.4 261 88.5
Thecc.05G104300 Theobroma cacao HOM05D003943 ORTHO05D004753 3.7e-127 458.4 261 88.5
COL.COLO4_29575 Corchorus olitorius HOM05D003943 ORTHO05D004753 4.9e-127 458.0 261 88.9
Eucgr.K02620 Eucalyptus grandis HOM05D003943 ORTHO05D004753 4.9e-127 458.0 261 88.1
Lalb_Chr02g0144091 Lupinus albus HOM05D003943 ORTHO05D004753 4.9e-127 458.0 261 87.7
C02p02670 Brassica napus HOM05D003943 ORTHO05D004753 6.4e-127 457.6 261 87.4
BolC2t06233H Brassica oleracea HOM05D003943 ORTHO05D004753 6.4e-127 457.6 261 87.4
Gohir.A01G201400 Gossypium hirsutum HOM05D003943 ORTHO05D004753 6.4e-127 457.6 261 87.7
MD05G1235300 Malus domestica HOM05D003943 ORTHO05D004753 6.4e-127 457.6 261 87.0
QL07p036748 Quercus lobata HOM05D003943 ORTHO05D004753 6.4e-127 457.6 260 88.1
BcaC03g13169 Brassica carinata HOM05D003943 ORTHO05D004753 8.4e-127 457.2 261 87.4
Hma1.2p1_1104F.1_g257380 Hydrangea macrophylla HOM05D003943 ORTHO05D004753 8.4e-127 457.2 259 89.2
Peaxi162Scf00286g00330 Petunia axillaris HOM05D003943 ORTHO05D004753 8.4e-127 457.2 264 89.4
C09p70420 Brassica napus HOM05D003943 ORTHO05D004753 1.1e-126 456.8 260 87.7
BolC9t59788H Brassica oleracea HOM05D003943 ORTHO05D004753 1.1e-126 456.8 260 87.7
BcaB05g21673 Brassica carinata HOM05D003943 ORTHO05D004753 1.9e-126 456.1 261 87.0
Cc04_g00390 Coffea canephora HOM05D003943 ORTHO05D004753 1.9e-126 456.1 269 86.2
Glyma.02G196900 Glycine max HOM05D003943 ORTHO05D004753 2.4e-126 455.7 261 87.4
SGA_v2.0_scaffold71G24009 Striga asiatica HOM05D003943 ORTHO05D004753 2.4e-126 455.7 261 87.4
Cpa.g.sc104.32 Carica papaya HOM05D003943 ORTHO05D004753 3.2e-126 455.3 261 87.4
CDE10G1025 Ceratophyllum demersum HOM05D003943 ORTHO05D004753 3.2e-126 455.3 261 87.7
Aa31sc52G210 Aethionema arabicum HOM05D003943 ORTHO05D004753 4.1e-126 454.9 261 88.5
SalBow6G5742 Salvia bowleyana HOM05D003943 ORTHO05D004753 4.1e-126 454.9 261 87.0
arahy.Tifrunner.gnm1.ann1.07MWYB Arachis hypogaea HOM05D003943 ORTHO05D004753 5.4e-126 454.5 261 87.0
arahy.Tifrunner.gnm1.ann1.T05T6P Arachis hypogaea HOM05D003943 ORTHO05D004753 5.4e-126 454.5 261 87.0
Sabra06G0156600 Salix brachista HOM05D003943 ORTHO05D004753 5.4e-126 454.5 285 83.2
Phvul.007G268100 Phaseolus vulgaris HOM05D003943 ORTHO05D004753 7.1e-126 454.1 261 87.0
A10p30010 Brassica napus HOM05D003943 ORTHO05D004753 9.2e-126 453.8 259 87.6
BraA02t04878Z Brassica rapa HOM05D003943 ORTHO05D004753 9.2e-126 453.8 260 86.9
BraA10t45041Z Brassica rapa HOM05D003943 ORTHO05D004753 9.2e-126 453.8 259 87.6
Ca_16636_v3 Cicer arietinum L. HOM05D003943 ORTHO05D004753 9.2e-126 453.8 261 86.6
Glyma.10G081400 Glycine max HOM05D003943 ORTHO05D004753 9.2e-126 453.8 261 86.6
PSO384G4082 Papaver somniferum HOM05D003943 ORTHO05D004753 9.2e-126 453.8 261 87.0
RcHm_v2.0_Chr2g0122251 Rosa chinensis HOM05D003943 ORTHO05D004753 9.2e-126 453.8 261 86.6
RcHm_v2.0_Chr4g0409741 Rosa chinensis HOM05D003943 ORTHO05D004753 9.2e-126 453.8 261 86.6
Glyma.10G002300 Glycine max HOM05D003943 ORTHO05D004753 1.2e-125 453.4 261 86.6
VMungo0331G0074 Vigna mungo HOM05D003943 ORTHO05D004753 1.2e-125 453.4 261 86.6
VMungo0720G1310 Vigna mungo HOM05D003943 ORTHO05D004753 1.2e-125 453.4 261 86.6
PSO339G3654 Papaver somniferum HOM05D003943 ORTHO05D004753 1.6e-125 453.0 261 86.6
MD10G1211300 Malus domestica HOM05D003943 ORTHO05D004753 2.1e-125 452.6 261 86.6
ATR0772G207 Amborella trichopoda HOM05D003943 ORTHO05D004753 2.7e-125 452.2 261 87.0
FvH4_1g24730 Fragaria vesca HOM05D003943 ORTHO05D004753 2.7e-125 452.2 261 86.2
FvH4_1g24810 Fragaria vesca HOM05D003943 ORTHO05D004753 2.7e-125 452.2 261 86.2
FAN19G3070 Fragaria x ananassa HOM05D003943 ORTHO05D004753 2.7e-125 452.2 261 86.2
Phvul.010G103000 Phaseolus vulgaris HOM05D003943 ORTHO05D004753 2.7e-125 452.2 261 86.6
TPR.G5876 Trifolium pratense HOM05D003943 ORTHO05D004753 2.7e-125 452.2 261 87.4
Ca_11700_v3 Cicer arietinum L. HOM05D003943 ORTHO05D004753 4.6e-125 451.4 261 86.6
Aqoxy1G00659 Aquilegia oxysepala HOM05D003943 ORTHO05D004753 1.0e-124 450.3 261 86.6
Sp6g36490 Schrenkiella parvula HOM05D003943 ORTHO05D004753 1.0e-124 450.3 261 87.4
AT5G06360 Arabidopsis thaliana HOM05D003943 ORTHO05D004753 1.3e-124 449.9 261 87.4
Carub.0006s0525 Capsella rubella HOM05D003943 ORTHO05D004753 1.3e-124 449.9 261 87.4
Ah.12g059190 Amaranthus hybridus HOM05D003943 ORTHO05D004753 3.0e-124 448.7 261 85.8
Psat6g114680 Pisum sativum HOM05D003943 ORTHO05D004753 1.5e-123 446.4 261 85.4
Medtr3g088865 Medicago truncatula HOM05D003943 ORTHO05D004753 1.9e-123 446.0 261 84.3
HPP92_002146 Vanilla planifolia HOM05D003943 ORTHO05D004753 1.9e-123 446.0 256 86.7
AL6G16440 Arabidopsis lyrata HOM05D003943 ORTHO05D004753 3.3e-123 445.3 261 86.6
ECA233G4676 Erigeron canadensis HOM05D003943 ORTHO05D004753 3.3e-123 445.3 261 85.4
Medtr0508s0010 Medicago truncatula HOM05D003943 ORTHO05D004753 3.3e-123 445.3 261 85.4
Lj1g0010263 Lotus japonicus HOM05D003943 ORTHO05D004753 4.3e-123 444.9 261 84.3
Thhalv10014439m.g Eutrema salsugineum HOM05D003943 ORTHO05D004753 2.8e-122 442.2 261 85.4
AUR62036383 Chenopodium quinoa HOM05D003943 ORTHO05D004753 3.6e-122 441.8 261 85.4
CARHR207110 Cardamine hirsuta HOM05D003943 ORTHO05D004753 4.7e-122 441.4 261 84.7
Mapoly0020s0123 Marchantia polymorpha HOM05D003943 ORTHO05D004753 8.9e-121 437.2 261 83.5
AagrBONN_evm.TU.Sc2ySwM_369.90 Anthoceros agrestis HOM05D003943 ORTHO05D004753 1.2e-120 436.8 261 83.1
Pp3c7_2280 Physcomitrium patens HOM05D003943 ORTHO05D004753 2.6e-120 435.6 261 83.1
EL10Ac5g12966 Beta vulgaris HOM05D003943 ORTHO05D004753 4.4e-120 434.9 260 85.8
AUR62030745 Chenopodium quinoa HOM05D003943 ORTHO05D004753 4.4e-120 434.9 256 85.2
SMO367G0573 Selaginella moellendorffii HOM05D003943 ORTHO05D004753 4.4e-120 434.9 261 82.0
FAN23G0735 Fragaria x ananassa HOM05D003943 ORTHO05D004753 2.2e-119 432.6 277 80.1
TPR.G2813 Trifolium pratense HOM05D003943 ORTHO05D004753 4.2e-118 428.3 276 80.1
Os07g0673100 Oryza sativa ssp. japonica HOM05D003943 ORTHO05D004753 6.0e-117 424.5 261 81.6
CiPaw.09G020900 Carya illinoinensis HOM05D003943 ORTHO05D004753 1.0e-116 423.7 240 89.2
CBR_g12036 Chara braunii HOM05D003943 ORTHO05D004753 3.0e-116 422.2 261 79.7
Zm00001eb111290 Zea mays HOM05D003943 ORTHO05D004753 3.9e-116 421.8 261 82.4
Zm00001eb330440 Zea mays HOM05D003943 ORTHO05D004753 3.9e-116 421.8 261 82.4
Lj2g0010046 Lotus japonicus HOM05D003943 ORTHO05D004753 1.1e-115 420.2 261 81.6
Dinv37798 Davidia involucrata HOM05D003943 ORTHO05D004753 5.3e-113 411.4 213 94.4
FAN19G1372 Fragaria x ananassa HOM05D003943 ORTHO05D004753 9.0e-113 410.6 241 85.1
PGSC0003DMG400029099 Solanum tuberosum HOM05D003943 ORTHO05D004753 1.5e-112 409.8 261 83.1
PRCOL_00000915 Prasinoderma coloniale HOM05D003943 ORTHO05D004753 2.0e-112 409.5 261 78.2
FAN28G2380 Fragaria x ananassa HOM05D003943 ORTHO05D004753 2.6e-112 409.1 241 84.6
MCO03G138 Micromonas commoda HOM05D003943 ORTHO05D004753 1.4e-110 403.3 261 73.9
Gohir.D09G130700 Gossypium hirsutum HOM05D003943 ORTHO05D004753 2.7e-109 399.1 261 80.5
Cre12.g507300 Chlamydomonas reinhardtii HOM05D003943 ORTHO05D004753 1.0e-108 397.1 261 74.7
unitig_748.g7832 Utricularia gibba HOM05D003943 ORTHO05D004753 3.9e-108 395.2 201 95.5
CAN.G710.48 Capsicum annuum HOM05D003943 ORTHO05D004753 3.6e-106 388.7 309 70.6
AagrBONN_evm.TU.Sc2ySwM_340.394 Anthoceros agrestis HOM05D003943 ORTHO05D004753 1.4e-105 386.7 266 75.9
Sc14g0006610 Simmondsia chinensis HOM05D003943 ORTHO05D004753 5.3e-105 384.8 222 87.4
Rhsim05G0206200 Rhododendron simsii HOM05D003943 ORTHO05D004753 7.6e-104 380.9 261 77.0
Nitab4.5_0003291g0080 Nicotiana tabacum HOM05D003943 ORTHO05D004753 2.4e-102 375.9 257 79.8
Aa31LG3G5080 Aethionema arabicum HOM05D003943 ORTHO05D004753 1.8e-100 369.8 200 92.0
DCAR_016668 Daucus carota HOM05D003943 ORTHO05D004753 1.8e-100 369.8 254 75.2
DCAR_017903 Daucus carota HOM05D003943 ORTHO05D004753 1.8e-100 369.8 240 77.9
SEGI_04875 Sequoiadendron giganteum HOM05D003943 ORTHO05D004753 1.8e-100 369.8 195 90.3
FAN26G0481 Fragaria x ananassa HOM05D003943 ORTHO05D004753 6.7e-100 367.9 337 60.5
Haze_27191 Corylus avellana HOM05D003943 ORTHO05D004753 6.0e-93 344.7 260 66.2
FAN23G1436 Fragaria x ananassa HOM05D003943 ORTHO05D004753 3.4e-88 328.9 177 88.7
Peaxi162Scf01149g00220 Petunia axillaris HOM05D003943 ORTHO05D004753 7.4e-83 311.2 161 93.8
Cfa024104 Carpinus fangiana HOM05D003943 ORTHO05D123184 2.3e-68 263.1 222 59.0
TPR.G6300 Trifolium pratense HOM05D003943 ORTHO05D004753 3.0e-68 262.7 240 59.6
CDE10G0220 Ceratophyllum demersum HOM05D003943 ORTHO05D004753 1.8e-57 226.9 113 96.5
BcaNung06320 Brassica carinata HOM05D003943 ORTHO05D004753 3.5e-56 222.6 143 80.4
BcaC06g32370 Brassica carinata HOM05D003943 ORTHO05D004753 5.9e-56 221.9 142 81.0
CDE10G0110 Ceratophyllum demersum HOM05D003943 ORTHO05D004753 1.3e-50 204.1 135 78.5
SHI12410 Sapria himalayana HOM05D003943 ORTHO05D004753 5.4e-49 198.7 98 94.9
Lsat_1_v5_gn_8_162181 Lactuca sativa HOM05D003943 ORTHO05D004753 1.0e-44 184.5 109 85.3
Duzib106G1686 Durio zibethinus HOM05D003943 ORTHO05D004753 3.1e-41 172.9 196 52.0
RcHm_v2.0_Chr7g0216551 Rosa chinensis HOM05D003943 ORTHO05D004753 3.5e-40 169.5 271 44.3
RcHm_v2.0_Chr7g0216591 Rosa chinensis HOM05D003943 ORTHO05D004753 5.9e-40 168.7 108 78.7
EL10Ac3g06422 Beta vulgaris HOM05D003943 ORTHO05D004753 1.7e-39 167.2 135 65.9
HanXRQChr03g0072971 Helianthus annuus HOM05D003943 ORTHO05D004753 1.9e-38 163.7 92 87.0
Lj9C540G13 Lonicera japonica HOM05D003943 ORTHO05D004753 1.0e-36 157.9 195 48.2
SHI12413 Sapria himalayana HOM05D003943 ORTHO05D004753 5.9e-32 142.1 81 88.9
BcaC01g01015 Brassica carinata HOM05D003943 ORTHO05D004753 3.0e-31 139.8 106 71.7
Lsat_1_v5_gn_6_65181 Lactuca sativa HOM05D003943 ORTHO05D000236 9.5e-30 134.8 92 73.9
Actinidia21636 Actinidia chinensis HOM05D003943 ORTHO05D004753 1.4e-25 120.9 111 61.3
RcHm_v2.0_Chr7g0216581 Rosa chinensis HOM05D003943 ORTHO05D004753 4.3e-14 82.8 81 56.8
SHI12416 Sapria himalayana HOM05D001600 ORTHO05D001502 7.3e-14 82.0 64 68.8
CAN.G1001.28 Capsicum annuum HOM05D003943 ORTHO05D005733 3.4e-11 73.2 59 66.1
Nitab4.5_0006519g0020 Nicotiana tabacum HOM05D000032 ORTHO05D005217 3.5e-08 63.2 52 67.3
BcaC05g26689 Brassica carinata HOM05D003943 ORTHO05D004753 1.5e-06 57.8 38 68.4
C04p30500 Brassica napus HOM05D002284 ORTHO05D033292 3.3e-06 56.6 34 76.5
SHI17182 Sapria himalayana HOM05D000004 ORTHO05D367797 7.3e-06 55.5 56 58.9
SHI30650 Sapria himalayana HOM05D004596 ORTHO05D005853 7.3e-06 55.5 62 54.8


User provided reference genes

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