Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008006g0060 Nicotiana tabacum HOM05D005610 ORTHO05D006181 2.3e-81 305.4 146 100.0
Nitab4.5_0001701g0220 Nicotiana tabacum HOM05D005610 ORTHO05D006181 1.3e-63 246.5 122 97.5
Nitab4.5_0018980g0020 Nicotiana tabacum HOM05D005610 ORTHO05D006181 4.8e-63 244.6 122 96.7
Peaxi162Scf00442g00523 Petunia axillaris HOM05D005610 ORTHO05D006181 4.0e-62 241.5 122 95.9
Sopen04g006810 Solanum pennellii HOM05D005610 ORTHO05D006181 6.9e-62 240.7 122 95.1
CAN.G1263.12 Capsicum annuum HOM05D005610 ORTHO05D006181 1.5e-61 239.6 122 95.1
Solyc04g014700.4 Solanum lycopersicum HOM05D005610 ORTHO05D006181 1.5e-61 239.6 122 94.3
PGSC0003DMG400023560 Solanum tuberosum HOM05D005610 ORTHO05D006181 2.0e-61 239.2 122 94.3
Nitab4.5_0001867g0090 Nicotiana tabacum HOM05D005610 ORTHO05D006181 2.6e-61 238.8 124 94.4
Cc00_g15270 Coffea canephora HOM05D005610 ORTHO05D006181 1.1e-54 216.9 114 90.4
Dinv13959 Davidia involucrata HOM05D005610 ORTHO05D006181 2.6e-53 212.2 115 87.0
Cc09_g00980 Coffea canephora HOM05D005610 ORTHO05D006181 1.3e-52 209.9 115 86.1
SalBow8G2682 Salvia bowleyana HOM05D005610 ORTHO05D006181 1.3e-52 209.9 114 87.7
QL10p003579 Quercus lobata HOM05D005610 ORTHO05D006181 1.1e-51 206.8 114 87.7
Oeu054255.1 Olea europaea HOM05D005610 ORTHO05D006181 2.4e-51 205.7 115 87.0
SGA_v2.0_scaffold7G03768 Striga asiatica HOM05D005610 ORTHO05D006181 5.5e-51 204.5 111 86.5
Cpa.g.sc152.66 Carica papaya HOM05D005610 ORTHO05D006181 7.1e-51 204.1 114 83.3
Migut.H01600 Erythranthe guttata HOM05D005610 ORTHO05D006181 7.1e-51 204.1 111 85.6
SGA_v2.0_scaffold4G01884 Striga asiatica HOM05D005610 ORTHO05D006181 1.2e-50 203.4 111 85.6
Prupe.8G115200 Prunus persica HOM05D005610 ORTHO05D006181 2.7e-50 202.2 116 81.9
Actinidia26870 Actinidia chinensis HOM05D005610 ORTHO05D006181 6.0e-50 201.1 115 82.6
Oeu052223.1 Olea europaea HOM05D005610 ORTHO05D006181 7.9e-50 200.7 115 84.3
Duzib235G0930 Durio zibethinus HOM05D005610 ORTHO05D006181 1.3e-49 199.9 113 84.1
GSVIVG01008189001 Vitis vinifera HOM05D005610 ORTHO05D006181 1.3e-49 199.9 114 82.5
ClCG07G002910 Citrullus lanatus HOM05D005610 ORTHO05D006181 1.8e-49 199.5 117 78.6
ECA238G1057 Erigeron canadensis HOM05D005610 ORTHO05D006181 1.8e-49 199.5 112 83.9
Gohir.A06G152700 Gossypium hirsutum HOM05D005610 ORTHO05D006181 1.8e-49 199.5 113 83.2
MD10G1088300 Malus domestica HOM05D005610 ORTHO05D006181 1.8e-49 199.5 114 83.3
Prupe.8G114900 Prunus persica HOM05D005610 ORTHO05D006181 2.3e-49 199.1 116 81.0
Haze_06904 Corylus avellana HOM05D005610 ORTHO05D006181 3.0e-49 198.7 112 83.0
vmacro03652 Vaccinium macrocarpon HOM05D005610 ORTHO05D006181 3.0e-49 198.7 118 78.0
Atru.chr1.2482 Acer truncatum HOM05D005610 ORTHO05D006181 3.9e-49 198.4 112 83.0
Thecc.06G231600 Theobroma cacao HOM05D005610 ORTHO05D006181 3.9e-49 198.4 111 84.7
COL.COLO4_31865 Corchorus olitorius HOM05D005610 ORTHO05D006181 6.7e-49 197.6 111 84.7
PGR142G4331 Punica granatum HOM05D005610 ORTHO05D006181 6.7e-49 197.6 115 81.7
EL10Ac4g08756 Beta vulgaris HOM05D005610 ORTHO05D006181 8.7e-49 197.2 108 88.0
TWI38G1154 Tripterygium wilfordii HOM05D005610 ORTHO05D006181 8.7e-49 197.2 113 83.2
Ciclev10017234m.g Citrus clementina HOM05D005610 ORTHO05D006181 1.1e-48 196.8 109 86.2
CSS0047184 Camellia sinensis var. sinensis HOM05D005610 ORTHO05D006181 1.5e-48 196.4 115 80.9
CiPaw.10G076800 Carya illinoinensis HOM05D005610 ORTHO05D006181 1.5e-48 196.4 114 81.6
MELO3C008876.2 Cucumis melo HOM05D005610 ORTHO05D006181 1.5e-48 196.4 117 78.6
MSTRG.13119 Avicennia marina HOM05D005610 ORTHO05D006181 1.9e-48 196.1 115 81.7
CANSAT01G2220 Cannabis sativa HOM05D005610 ORTHO05D006181 1.9e-48 196.1 116 77.6
Gorai.010G185800 Gossypium raimondii HOM05D005610 ORTHO05D006181 1.9e-48 196.1 113 82.3
ClCG01G011300 Citrullus lanatus HOM05D005610 ORTHO05D006181 2.5e-48 195.7 117 78.6
RcHm_v2.0_Chr6g0259461 Rosa chinensis HOM05D005610 ORTHO05D006181 2.5e-48 195.7 116 80.2
Sed0027170 Sechium edule HOM05D005610 ORTHO05D006181 2.5e-48 195.7 117 76.9
Thecc.10G134700 Theobroma cacao HOM05D005610 ORTHO05D006181 2.5e-48 195.7 111 82.0
PSO210G2880 Papaver somniferum HOM05D005610 ORTHO05D006181 5.6e-48 194.5 116 77.6
CsaV3_4G031690 Cucumis sativus L. HOM05D005610 ORTHO05D006181 7.4e-48 194.1 117 76.9
Thecc.10G135500 Theobroma cacao HOM05D005610 ORTHO05D006181 7.4e-48 194.1 111 81.1
HanXRQChr05g0129341 Helianthus annuus HOM05D005610 ORTHO05D006181 9.6e-48 193.7 114 78.1
TAR624G0514 Trochodendron aralioides HOM05D005610 ORTHO05D006181 9.6e-48 193.7 114 81.6
Duzib160G0112 Durio zibethinus HOM05D005610 ORTHO05D006181 1.6e-47 193.0 113 79.6
FAN15G0825 Fragaria x ananassa HOM05D005610 ORTHO05D006181 1.6e-47 193.0 114 79.8
FvH4_2g07070 Fragaria vesca HOM05D005610 ORTHO05D006181 4.8e-47 191.4 115 78.3
AUR62034142 Chenopodium quinoa HOM05D005610 ORTHO05D006181 1.4e-46 189.9 108 82.4
AUR62014294 Chenopodium quinoa HOM05D005610 ORTHO05D006181 1.8e-46 189.5 111 80.2
Ca_13393_v3 Cicer arietinum L. HOM05D005610 ORTHO05D006181 1.8e-46 189.5 114 79.8
Medtr1g023330 Medicago truncatula HOM05D005610 ORTHO05D006181 5.3e-46 188.0 115 77.4
Hund25163 Selenicereus undatus HOM05D005610 ORTHO05D006181 5.3e-46 188.0 111 79.3
Aa31LG5G10530 Aethionema arabicum HOM05D005610 ORTHO05D006181 6.9e-46 187.6 111 77.5
Aqoxy4G02780 Aquilegia oxysepala HOM05D005610 ORTHO05D006181 6.9e-46 187.6 111 81.1
CDE04G2721 Ceratophyllum demersum HOM05D005610 ORTHO05D006181 6.9e-46 187.6 114 75.4
Lj5g0020791 Lotus japonicus HOM05D005610 ORTHO05D006181 6.9e-46 187.6 140 66.4
Thhalv10022365m.g Eutrema salsugineum HOM05D005610 ORTHO05D006181 1.2e-45 186.8 121 71.1
Glyma.19G169600 Glycine max HOM05D005610 ORTHO05D006181 1.2e-45 186.8 114 77.2
Medtr8g106470 Medicago truncatula HOM05D005610 ORTHO05D006181 1.5e-45 186.4 115 78.3
arahy.Tifrunner.gnm1.ann1.PD4MQY Arachis hypogaea HOM05D005610 ORTHO05D006181 2.0e-45 186.0 114 77.2
Lj4g0017663 Lotus japonicus HOM05D005610 ORTHO05D006181 2.6e-45 185.7 114 77.2
PSO302G0046 Papaver somniferum HOM05D005610 ORTHO05D006181 3.4e-45 185.3 113 75.2
Phvul.004G117800 Phaseolus vulgaris HOM05D005610 ORTHO05D006181 3.4e-45 185.3 114 76.3
arahy.Tifrunner.gnm1.ann1.IYUI89 Arachis hypogaea HOM05D003989 ORTHO05D004626 5.8e-45 184.5 114 76.3
BcaC09g47662 Brassica carinata HOM05D005610 ORTHO05D006181 7.6e-45 184.1 111 75.7
Eucgr.B02596 Eucalyptus grandis HOM05D005610 ORTHO05D006181 7.6e-45 184.1 115 75.7
BNapus_Darmor_BZH_scaffold_133p00040 Brassica napus HOM05D005610 ORTHO05D006181 1.3e-44 183.3 111 75.7
BraA01t04664Z Brassica rapa HOM05D005610 ORTHO05D006181 1.3e-44 183.3 111 75.7
Glyma.03G168300 Glycine max HOM05D005610 ORTHO05D006181 1.3e-44 183.3 114 74.6
Sp3g00630 Schrenkiella parvula HOM05D005610 ORTHO05D006181 1.7e-44 183.0 111 74.8
Carub.0003s0067 Capsella rubella HOM05D005610 ORTHO05D006181 2.2e-44 182.6 111 75.7
CARHR075530 Cardamine hirsuta HOM05D005610 ORTHO05D006181 2.2e-44 182.6 111 76.6
THA.LOC104822382 Tarenaya hassleriana HOM05D005610 ORTHO05D006181 3.8e-44 181.8 116 73.3
AT3G01435 Arabidopsis thaliana HOM05D005610 ORTHO05D006181 6.5e-44 181.0 111 74.8
Lalb_Chr04g0257231 Lupinus albus HOM05D005610 ORTHO05D006181 6.5e-44 181.0 113 76.1
unitig_748.g7924 Utricularia gibba HOM05D000772 ORTHO05D006181 8.4e-44 180.6 109 77.1
AL3G10740 Arabidopsis lyrata HOM05D005610 ORTHO05D006181 1.4e-43 179.9 111 74.8
Manes.16G001300 Manihot esculenta HOM05D005610 ORTHO05D006181 2.5e-43 179.1 119 73.1
Nn8g38603 Nelumbo nucifera HOM05D005610 ORTHO05D006181 7.1e-43 177.6 116 74.1
VMungo0464G1641 Vigna mungo HOM05D005610 ORTHO05D006181 1.2e-42 176.8 138 64.5
A05p44570 Brassica napus HOM05D005610 ORTHO05D006181 2.7e-42 175.6 111 73.0
BraA05t23199Z Brassica rapa HOM05D005610 ORTHO05D006181 2.7e-42 175.6 111 73.0
Lj6g0026774 Lotus japonicus HOM05D005610 ORTHO05D006181 7.9e-42 174.1 112 70.5
Thhalv10022907m.g Eutrema salsugineum HOM05D005610 ORTHO05D006181 1.0e-41 173.7 126 66.7
Sabra04G0000600 Salix brachista HOM05D005610 ORTHO05D006181 3.0e-41 172.2 115 72.2
BolC5t35148H Brassica oleracea HOM05D005610 ORTHO05D006181 6.7e-41 171.0 111 71.2
Potri.004G001600 Populus trichocarpa HOM05D005610 ORTHO05D006181 6.7e-41 171.0 115 72.2
BolC1t05956H Brassica oleracea HOM05D005610 ORTHO05D006181 1.1e-40 170.2 132 62.9
Lsat_1_v5_gn_7_13401 Lactuca sativa HOM05D005610 ORTHO05D006181 1.1e-40 170.2 101 76.2
C09p75160 Brassica napus HOM05D005610 ORTHO05D006181 7.4e-40 167.5 111 70.3
Ah.06g187910 Amaranthus hybridus HOM05D005610 ORTHO05D006181 1.3e-39 166.8 100 78.0
ATR1153G018 Amborella trichopoda HOM05D005610 ORTHO05D006181 2.0e-37 159.5 108 68.5
Zm00001eb234830 Zea mays HOM05D005610 ORTHO05D006181 5.9e-37 157.9 106 68.9
ATR0723G088 Amborella trichopoda HOM05D005610 ORTHO05D006181 2.9e-36 155.6 108 67.6
HPP92_003728 Vanilla planifolia HOM05D005610 ORTHO05D006181 2.5e-35 152.5 108 64.8
SEGI_23772 Sequoiadendron giganteum HOM05D005610 ORTHO05D006181 1.6e-34 149.8 116 64.7
Gohir.D06G159100 Gossypium hirsutum HOM05D005610 ORTHO05D006181 2.7e-34 149.1 83 80.7
Zm00001eb206370 Zea mays HOM05D005610 ORTHO05D006181 3.6e-34 148.7 112 63.4
Dinv29757 Davidia involucrata HOM05D005610 ORTHO05D006181 1.8e-33 146.4 81 90.1
MBI19_g29445_MAGBIO Magnolia biondii HOM05D005610 ORTHO05D006181 1.8e-33 146.4 132 58.3
CSS0025052 Camellia sinensis var. sinensis HOM05D005610 ORTHO05D006181 2.3e-33 146.0 85 76.5
Os02g0189100 Oryza sativa ssp. japonica HOM05D005610 ORTHO05D006181 2.3e-33 146.0 106 63.2
FAN24G2055 Fragaria x ananassa HOM05D005610 ORTHO05D006181 3.3e-32 142.1 84 76.2
Psat6g005240 Pisum sativum HOM05D005610 ORTHO05D006181 2.2e-31 139.4 109 67.9
TAR626G0207 Trochodendron aralioides HOM05D005610 ORTHO05D006181 2.2e-31 139.4 179 45.8
HanXRQChr15g0470051 Helianthus annuus HOM05D005610 ORTHO05D006181 8.2e-31 137.5 88 76.1
Pp3c10_18150 Physcomitrium patens HOM05D005610 ORTHO05D006181 2.2e-28 129.4 107 57.0
Actinidia02323 Actinidia chinensis HOM05D005610 ORTHO05D006181 3.2e-27 125.6 67 83.6
Mapoly0014s0199 Marchantia polymorpha HOM05D005610 ORTHO05D006181 3.2e-27 125.6 106 53.8
SMO200G0153 Selaginella moellendorffii HOM05D005610 ORTHO05D006181 5.5e-27 124.8 115 47.8
Thecc.10G135300 Theobroma cacao HOM05D005610 ORTHO05D006181 1.6e-26 123.2 70 84.3
BNapus_Darmor_BZH_scaffold_119p00050 Brassica napus HOM05D005610 ORTHO05D006181 2.7e-26 122.5 75 76.0
BNapus_Darmor_BZH_scaffold_97p00380 Brassica napus HOM05D005610 ORTHO05D006181 2.7e-26 122.5 75 76.0
FAN27G3428 Fragaria x ananassa HOM05D005610 ORTHO05D006181 5.7e-24 114.8 74 71.6
Eucgr.K02585 Eucalyptus grandis HOM05D005610 ORTHO05D006181 2.2e-23 112.8 70 77.1
Zm00001eb004040 Zea mays HOM05D005610 ORTHO05D006181 1.8e-22 109.8 72 65.3
CBR_g27782 Chara braunii HOM05D005610 ORTHO05D001468 4.5e-21 105.1 118 45.8
Rhsim13G0147700 Rhododendron simsii HOM05D005610 ORTHO05D006181 1.7e-20 103.2 61 80.3
FAN20G1916 Fragaria x ananassa HOM05D005610 ORTHO05D006181 2.5e-19 99.4 57 77.2
AagrBONN_evm.TU.Sc2ySwM_228.3334 Anthoceros agrestis HOM05D005610 ORTHO05D006181 3.2e-19 99.0 135 37.8
Pp3c3_34050 Physcomitrium patens HOM05D005610 ORTHO05D006181 7.2e-19 97.8 78 59.0
TPR.G7342 Trifolium pratense HOM05D005610 ORTHO05D006181 4.7e-18 95.1 56 76.8
Sc16g0007910 Simmondsia chinensis HOM05D005610 ORTHO05D006181 8.0e-18 94.4 54 83.3
RcHm_v2.0_Chr7g0240721 Rosa chinensis HOM05D005610 ORTHO05D006181 2.6e-13 79.3 48 79.2
RcHm_v2.0_Chr7g0240711 Rosa chinensis HOM05D005610 ORTHO05D006181 4.5e-13 78.6 52 69.2
Migut.M01383 Erythranthe guttata HOM05D005610 ORTHO05D006181 1.4e-09 67.0 55 58.2
SEGI_27415 Sequoiadendron giganteum HOM05D005610 ORTHO05D006181 3.0e-09 65.9 60 55.0
CARHR125830 Cardamine hirsuta HOM05D005610 ORTHO05D006181 6.3e-07 58.2 38 63.2


User provided reference genes

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