Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 8.9e-148 526.9 271 100.0
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 6.3e-85 318.2 183 90.7
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 7.0e-84 314.7 183 88.5
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 1.5e-83 313.5 183 88.5
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 1.0e-82 310.8 183 89.1
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 7.2e-81 304.7 183 85.8
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 3.9e-79 298.9 183 88.5
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 1.9e-65 253.4 182 72.5
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 5.5e-65 251.9 183 72.1
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 7.2e-65 251.5 183 69.9
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 2.1e-64 250.0 183 72.1
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 4.7e-64 248.8 183 71.6
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 6.1e-64 248.4 183 70.5
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 1.0e-63 247.7 183 69.4
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 1.8e-63 246.9 183 69.4
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 1.8e-63 246.9 182 70.9
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 1.8e-63 246.9 182 70.9
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 3.0e-63 246.1 183 69.9
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 3.0e-63 246.1 182 70.9
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 5.2e-63 245.4 182 69.2
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 4.4e-62 242.3 183 69.4
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 7.5e-62 241.5 183 68.3
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 7.5e-62 241.5 217 61.3
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 9.8e-62 241.1 182 68.7
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 9.8e-62 241.1 183 66.7
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 3.1e-60 236.1 182 67.0
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 4.1e-60 235.7 183 66.1
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 5.4e-60 235.3 197 65.0
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 9.1e-60 234.6 182 67.6
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 1.2e-59 234.2 183 65.6
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 1.2e-59 234.2 183 66.1
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 1.2e-59 234.2 182 66.5
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 1.2e-59 234.2 183 67.2
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 1.2e-59 234.2 183 67.2
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 5.9e-59 231.9 183 68.9
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 5.9e-59 231.9 181 65.7
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 5.9e-59 231.9 182 63.7
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 1.3e-58 230.7 180 66.7
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 1.3e-58 230.7 183 65.6
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 1.9e-57 226.9 184 66.8
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 2.5e-57 226.5 182 63.7
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 4.2e-57 225.7 182 64.3
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 4.2e-57 225.7 182 64.3
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 9.5e-57 224.6 183 67.2
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 1.2e-56 224.2 181 65.7
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 1.2e-56 224.2 180 65.0
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 8.0e-56 221.5 181 63.0
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 1.2e-54 217.6 228 55.3
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 2.8e-53 213.0 182 64.3
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 1.8e-52 210.3 182 63.2
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 9.2e-52 208.0 180 57.8
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 1.2e-51 207.6 182 63.2
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 1.6e-51 207.2 225 53.8
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 3.5e-51 206.1 188 56.9
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 4.5e-51 205.7 181 60.8
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 5.9e-51 205.3 188 60.1
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 1.3e-50 204.1 212 57.1
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 2.5e-49 199.9 149 66.4
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 4.3e-49 199.1 183 60.7
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 1.2e-48 197.6 156 65.4
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 2.8e-48 196.4 181 60.2
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 2.8e-48 196.4 189 59.3
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 4.7e-48 195.7 160 63.1
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 2.3e-47 193.4 212 56.6
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 5.2e-47 192.2 143 69.9
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 6.8e-47 191.8 206 56.3
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 2.6e-46 189.9 145 67.6
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 2.0e-43 180.3 180 51.1
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 1.6e-40 170.6 181 47.0
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 2.1e-40 170.2 181 49.2
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 2.9e-37 159.8 181 43.6
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 8.3e-37 158.3 205 47.8
CANSAT56G0191 Cannabis sativa HOM05D007678 ORTHO05D009658 7.8e-35 151.8 123 65.0
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 3.1e-31 139.8 183 47.5
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 1.5e-30 137.5 112 65.2
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 1.5e-30 137.5 107 65.4
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 3.7e-29 132.9 96 74.0
TPR.G8973 Trifolium pratense HOM05D007678 ORTHO05D009658 4.1e-28 129.4 90 70.0
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 2.5e-25 120.2 96 60.4
Cc06_g20610 Coffea canephora HOM05D007678 ORTHO05D009658 2.8e-24 116.7 78 69.2
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 8.9e-23 111.7 96 61.5
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 2.6e-22 110.2 94 61.7
PRCOL_00006709 Prasinoderma coloniale HOM05D007678 ORTHO05D009658 4.7e-16 89.4 179 29.1
arahy.Tifrunner.gnm1.ann1.6E2HM0 Arachis hypogaea HOM05D007678 ORTHO05D009658 6.2e-16 89.0 78 57.7
MCO01G505 Micromonas commoda HOM05D007678 ORTHO05D009658 1.8e-15 87.4 176 27.8
GSVIVG01012452001 Vitis vinifera HOM05D007678 ORTHO05D009658 1.7e-13 80.9 70 58.6
CSS0047660 Camellia sinensis var. sinensis HOM05D007678 ORTHO05D009658 1.1e-12 78.2 60 65.0
arahy.Tifrunner.gnm1.ann1.78M82M Arachis hypogaea HOM05D007678 ORTHO05D009658 4.2e-12 76.3 66 62.1
QL04p021975 Quercus lobata HOM05D007678 ORTHO05D009658 1.7e-10 70.9 53 67.9


User provided reference genes

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