Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007979g0100 Nicotiana tabacum HOM05D000533 ORTHO05D002807 6.4e-45 183.7 94 100.0
Nitab4.5_0007400g0060 Nicotiana tabacum HOM05D000533 ORTHO05D002807 3.7e-32 141.4 80 92.5
Solyc00g500041.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 3.7e-32 141.4 80 92.5
Solyc00g500086.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 3.7e-32 141.4 80 92.5
Solyc00g500123.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 3.7e-32 141.4 80 92.5
Solyc00g500193.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 3.7e-32 141.4 80 92.5
CAN.G1526.1 Capsicum annuum HOM05D000533 ORTHO05D002807 1.1e-31 139.8 80 91.2
CAN.G1470.9 Capsicum annuum HOM05D000533 ORTHO05D002807 9.0e-31 136.7 80 90.0
CAN.G1298.18 Capsicum annuum HOM05D000533 ORTHO05D002807 1.5e-30 136.0 80 88.8
CAN.G127.11 Capsicum annuum HOM05D000533 ORTHO05D002807 6.4e-29 130.6 79 87.3
CAN.G1045.10 Capsicum annuum HOM05D000533 ORTHO05D002807 1.1e-28 129.8 80 86.2
CAN.G965.4 Capsicum annuum HOM05D000533 ORTHO05D002807 1.4e-28 129.4 80 86.2
Nitab4.5_0006502g0040 Nicotiana tabacum HOM05D000533 ORTHO05D002807 1.4e-28 129.4 80 85.0
ATR0924G001 Amborella trichopoda HOM05D000533 ORTHO05D001069 4.2e-28 127.9 79 83.5
Hma1.2p1_0660F.1_g197440 Hydrangea macrophylla HOM05D000533 ORTHO05D002807 1.6e-27 125.9 79 84.8
Hma1.2p1_2753F.1_g327925 Hydrangea macrophylla HOM05D000533 ORTHO05D002807 1.6e-27 125.9 79 84.8
CAN.G30.8 Capsicum annuum HOM05D000533 ORTHO05D002807 2.7e-27 125.2 80 81.2
Sed0004290 Sechium edule HOM05D000533 ORTHO05D002807 2.7e-27 125.2 79 82.3
Sed0023589 Sechium edule HOM05D000533 ORTHO05D002807 2.7e-27 125.2 79 82.3
Sed0023659 Sechium edule HOM05D000533 ORTHO05D002807 2.7e-27 125.2 79 82.3
Ah.10g027260 Amaranthus hybridus HOM05D000533 ORTHO05D001069 4.6e-27 124.4 79 83.5
Ah.10g027700 Amaranthus hybridus HOM05D000533 ORTHO05D001069 4.6e-27 124.4 79 83.5
Lj2C1238G35 Lonicera japonica HOM05D000533 ORTHO05D001069 4.6e-27 124.4 79 83.5
Lju5009P0T26 Lonicera japonica HOM05D000533 ORTHO05D002807 4.6e-27 124.4 79 83.5
HanXRQChr00c0289g0573151 Helianthus annuus HOM05D000533 ORTHO05D002807 6.0e-27 124.0 79 84.8
HanXRQChr00c0336g0573691 Helianthus annuus HOM05D000533 ORTHO05D002807 6.0e-27 124.0 79 84.8
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 6.0e-27 124.0 79 84.8
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 6.0e-27 124.0 79 84.8
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 6.0e-27 124.0 79 84.8
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 6.0e-27 124.0 79 84.8
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 6.0e-27 124.0 79 84.8
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 6.0e-27 124.0 79 84.8
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 6.0e-27 124.0 79 84.8
EL10Ac6g14288 Beta vulgaris HOM05D000533 ORTHO05D002807 7.9e-27 123.6 79 83.5
EL10As15g24097 Beta vulgaris HOM05D000533 ORTHO05D002807 7.9e-27 123.6 79 83.5
MELO3C027055.2 Cucumis melo HOM05D000533 ORTHO05D002807 1.8e-26 122.5 79 81.0
Sabra10G0056200 Salix brachista HOM05D000533 ORTHO05D001069 2.3e-26 122.1 79 81.0
SabraPtG0005900 Salix brachista HOM05D000533 ORTHO05D001069 2.3e-26 122.1 79 81.0
Ah.10g027030 Amaranthus hybridus HOM05D000533 ORTHO05D002807 3.9e-26 121.3 79 82.3
DCAR_032541 Daucus carota HOM05D000533 ORTHO05D002807 5.1e-26 120.9 79 82.3
vmacro22393 Vaccinium macrocarpon HOM05D000533 ORTHO05D001069 5.1e-26 120.9 79 79.7
vmacro22419 Vaccinium macrocarpon HOM05D000533 ORTHO05D001069 5.1e-26 120.9 79 79.7
Migut.D01248 Erythranthe guttata HOM05D000533 ORTHO05D001069 6.7e-26 120.6 79 79.7
AL9U11959 Arabidopsis lyrata HOM05D000533 ORTHO05D002807 8.7e-26 120.2 79 79.7
ATCG01100 Arabidopsis thaliana HOM05D000533 ORTHO05D002807 8.7e-26 120.2 79 79.7
CARHR282470 Cardamine hirsuta HOM05D000533 ORTHO05D002807 8.7e-26 120.2 79 79.7
PGR111G0022 Punica granatum HOM05D000533 ORTHO05D002807 8.7e-26 120.2 79 78.5
SalBow1G0006 Salvia bowleyana HOM05D000533 ORTHO05D002807 8.7e-26 120.2 79 78.5
Nn064s42206 Nelumbo nucifera HOM05D000533 ORTHO05D002807 1.1e-25 119.8 79 81.0
Nn7g37744 Nelumbo nucifera HOM05D000533 ORTHO05D002807 1.1e-25 119.8 79 81.0
MBI10_g47589_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 1.5e-25 119.4 79 81.0
CSS0030738 Camellia sinensis var. sinensis HOM05D000533 ORTHO05D001069 1.9e-25 119.0 76 81.6
AUR62015545 Chenopodium quinoa HOM05D000533 ORTHO05D001069 1.9e-25 119.0 79 79.7
Lalb_Chr07g0191821 Lupinus albus HOM05D000533 ORTHO05D001069 1.9e-25 119.0 79 78.5
FAN01G2990 Fragaria x ananassa HOM05D000533 ORTHO05D002807 2.5e-25 118.6 79 78.5
arahy.Tifrunner.gnm1.ann1.1262SD Arachis hypogaea HOM05D000533 ORTHO05D002807 3.3e-25 118.2 79 77.2
arahy.Tifrunner.gnm1.ann1.510BCU Arachis hypogaea HOM05D000533 ORTHO05D002807 3.3e-25 118.2 79 77.2
arahy.Tifrunner.gnm1.ann1.840LER Arachis hypogaea HOM05D000533 ORTHO05D002807 3.3e-25 118.2 79 77.2
C05p53830 Brassica napus HOM05D000533 ORTHO05D002807 4.3e-25 117.9 79 77.2
C09p40310 Brassica napus HOM05D000533 ORTHO05D002807 4.3e-25 117.9 79 77.2
BraSC103t45432Z Brassica rapa HOM05D000533 ORTHO05D002807 4.3e-25 117.9 79 77.2
BraSC143t45657Z Brassica rapa HOM05D000533 ORTHO05D002807 4.3e-25 117.9 79 77.2
Gohir.1Z049694 Gossypium hirsutum HOM05D000533 ORTHO05D001069 4.3e-25 117.9 79 75.9
Oeu012820.1 Olea europaea HOM05D000533 ORTHO05D002807 4.3e-25 117.9 79 77.2
Medtr4g006100 Medicago truncatula HOM05D000533 ORTHO05D001069 5.6e-25 117.5 79 77.2
Medtr6g042200 Medicago truncatula HOM05D000533 ORTHO05D001069 5.6e-25 117.5 79 77.2
Medtr7g021700 Medicago truncatula HOM05D000533 ORTHO05D006151 5.6e-25 117.5 79 77.2
PSO548G0012 Papaver somniferum HOM05D000533 ORTHO05D002807 7.4e-25 117.1 79 78.5
RcHm_v2.0_Chr3g0470801 Rosa chinensis HOM05D000533 ORTHO05D002807 7.4e-25 117.1 79 78.5
Psat0s1160g0400 Pisum sativum HOM05D000533 ORTHO05D002807 9.6e-25 116.7 79 75.9
Psat0s6989g0240 Pisum sativum HOM05D000533 ORTHO05D001069 9.6e-25 116.7 79 75.9
Psat1g050080 Pisum sativum HOM05D000533 ORTHO05D001069 9.6e-25 116.7 79 75.9
Psat3g095040 Pisum sativum HOM05D000533 ORTHO05D001069 9.6e-25 116.7 79 75.9
Psat6g182640 Pisum sativum HOM05D000533 ORTHO05D002807 9.6e-25 116.7 79 75.9
Psat7g150960 Pisum sativum HOM05D000533 ORTHO05D001069 9.6e-25 116.7 79 75.9
BolC9t56913H Brassica oleracea HOM05D000533 ORTHO05D002807 1.3e-24 116.3 79 75.9
BolSC35t60689H Brassica oleracea HOM05D000533 ORTHO05D002807 2.8e-24 115.2 79 75.9
BolSC44t60825H Brassica oleracea HOM05D000533 ORTHO05D002807 2.8e-24 115.2 79 75.9
BolSC46t60955H Brassica oleracea HOM05D000533 ORTHO05D002807 2.8e-24 115.2 79 75.9
BolSC47t61062H Brassica oleracea HOM05D000533 ORTHO05D002807 2.8e-24 115.2 79 75.9
Gohir.A04G053078 Gossypium hirsutum HOM05D000533 ORTHO05D001069 3.7e-24 114.8 79 74.7
Gohir.D11G334151 Gossypium hirsutum HOM05D000533 ORTHO05D001069 3.7e-24 114.8 79 74.7
GSVIVG01012613001 Vitis vinifera HOM05D000533 ORTHO05D001069 3.7e-24 114.8 79 74.7
Psat4g172360 Pisum sativum HOM05D000533 ORTHO05D002807 8.2e-24 113.6 79 74.7
LjContig00318g0007609 Lotus japonicus HOM05D000533 ORTHO05D002807 1.1e-23 113.2 79 74.7
LjContig00319g0005103 Lotus japonicus HOM05D000533 ORTHO05D002807 1.1e-23 113.2 79 74.7
Psat0s1160g0320 Pisum sativum HOM05D000533 ORTHO05D001069 1.4e-23 112.8 79 73.4
Gohir.D06G147033 Gossypium hirsutum HOM05D000533 ORTHO05D002807 1.2e-22 109.8 79 72.2
SEGI_20811 Sequoiadendron giganteum HOM05D000533 ORTHO05D002807 1.2e-22 109.8 80 68.8
Gohir.A06G090050 Gossypium hirsutum HOM05D000533 ORTHO05D002807 1.5e-22 109.4 79 70.9
Gorai.009G395200 Gossypium raimondii HOM05D000533 ORTHO05D002807 3.4e-22 108.2 79 70.9
Psat0s411g0120 Pisum sativum HOM05D000533 ORTHO05D002807 3.4e-22 108.2 78 70.5
ATR0043G018 Amborella trichopoda HOM05D000533 ORTHO05D001069 4.5e-22 107.8 79 73.4
Medtr0002s0150 Medicago truncatula HOM05D000533 ORTHO05D001069 4.5e-22 107.8 79 70.9
Sopen02g002710 Solanum pennellii HOM05D000533 ORTHO05D002807 4.5e-22 107.8 74 82.4
Nitab4.5_0000660g0060 Nicotiana tabacum HOM05D000533 ORTHO05D002807 5.8e-22 107.5 74 77.0
Potri.013G074800 Populus trichocarpa HOM05D000533 ORTHO05D002807 6.5e-21 104.0 79 73.4
TPR.G37210 Trifolium pratense HOM05D000533 ORTHO05D002807 1.4e-20 102.8 73 72.6
Gorai.003G091000 Gossypium raimondii HOM05D000533 ORTHO05D002807 1.9e-20 102.4 79 67.1
BraSC59t46529Z Brassica rapa HOM05D000533 ORTHO05D002807 7.1e-20 100.5 74 74.3
Solyc02g011800.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 2.7e-19 98.6 73 79.5
Gohir.D08G207450 Gossypium hirsutum HOM05D000533 ORTHO05D001069 1.0e-18 96.7 73 68.5
PGSC0003DMG402008783 Solanum tuberosum HOM05D000533 ORTHO05D002807 1.8e-18 95.9 54 92.6
MELO3C031836.2 Cucumis melo HOM05D000533 ORTHO05D002807 5.1e-18 94.4 79 63.3
BolSC45t60906H Brassica oleracea HOM05D000533 ORTHO05D002807 3.7e-16 88.2 72 66.7
Sed0007463 Sechium edule HOM05D000533 ORTHO05D002807 3.7e-16 88.2 78 64.1
SMO086G0018 Selaginella moellendorffii HOM05D000533 ORTHO05D002807 6.3e-16 87.4 79 57.0
Solyc11g021233.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 6.3e-16 87.4 63 69.8
Hund28342 Selenicereus undatus HOM05D000533 ORTHO05D002807 1.1e-15 86.7 59 81.4
Hund29093 Selenicereus undatus HOM05D000533 ORTHO05D002807 1.1e-15 86.7 59 81.4
Hund30926 Selenicereus undatus HOM05D000533 ORTHO05D002807 1.1e-15 86.7 59 81.4
MBI10_g47594_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 1.4e-15 86.3 79 62.0
Gohir.D04G093016 Gossypium hirsutum HOM05D000533 ORTHO05D002807 1.5e-14 82.8 79 58.2
CAN.G262.8 Capsicum annuum HOM05D000533 ORTHO05D002807 4.5e-14 81.3 50 84.0
Gohir.A01G139542 Gossypium hirsutum HOM05D000533 ORTHO05D002807 4.5e-14 81.3 79 57.0
HanXRQChr01g0000271 Helianthus annuus HOM05D000533 ORTHO05D001069 5.9e-14 80.9 55 83.6
Medtr3g113820 Medicago truncatula HOM05D000533 ORTHO05D002807 5.9e-14 80.9 79 58.2
Gorai.005G106600 Gossypium raimondii HOM05D000533 ORTHO05D002807 1.3e-13 79.7 79 57.0
Lsat_1_v5_gn_5_65981 Lactuca sativa HOM05D000533 ORTHO05D001069 2.2e-13 79.0 79 59.5
Gorai.009G398900 Gossypium raimondii HOM05D000533 ORTHO05D002807 7.2e-12 73.9 78 56.4
C02p28820 Brassica napus HOM05D000533 ORTHO05D002807 2.7e-11 72.0 51 72.5
BolC2t08927H Brassica oleracea HOM05D000533 ORTHO05D002807 2.7e-11 72.0 51 72.5
BraSC25t45913Z Brassica rapa HOM05D000533 ORTHO05D002807 2.7e-11 72.0 49 75.5
Psat1g104960 Pisum sativum HOM05D000533 ORTHO05D002807 3.6e-11 71.6 62 56.5
BolC2t10600H Brassica oleracea HOM05D000533 ORTHO05D002807 6.1e-11 70.9 51 70.6
BolSC35t60707H Brassica oleracea HOM05D000533 ORTHO05D002807 6.1e-11 70.9 51 70.6
Gohir.D02G093940 Gossypium hirsutum HOM05D000533 ORTHO05D002807 3.9e-10 68.2 79 51.9
HanXRQChr17g0557741 Helianthus annuus HOM05D000533 ORTHO05D002807 7.4e-09 63.9 38 86.8
SGA_v2.0_scaffold150G36657 Striga asiatica HOM05D000533 ORTHO05D002807 4.8e-08 61.2 50 60.0
FAN09G0092 Fragaria x ananassa HOM05D000107 ORTHO05D002484 1.1e-07 60.1 55 61.8
Psat0s1586g0320 Pisum sativum HOM05D000533 ORTHO05D002807 3.1e-07 58.5 39 71.8
THA.LOC104820711 Tarenaya hassleriana HOM05D000533 ORTHO05D002807 3.1e-07 58.5 75 36.0
Mapoly0167s0016 Marchantia polymorpha HOM05D000533 ORTHO05D002807 3.4e-06 55.1 34 76.5


User provided reference genes

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