Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007979g0070 Nicotiana tabacum HOM05D007371 ORTHO05D009319 5.2e-81 304.3 151 100.0
Peaxi162Scf00338g00628 Petunia axillaris HOM05D007371 ORTHO05D009319 6.3e-42 174.5 166 65.7
CAN.G1526.6 Capsicum annuum HOM05D007371 ORTHO05D009319 1.5e-40 169.9 177 61.6
CAN.G278.2 Capsicum annuum HOM05D007371 ORTHO05D009319 1.5e-40 169.9 177 61.6
CAN.G939.5 Capsicum annuum HOM05D007371 ORTHO05D009319 1.5e-40 169.9 177 61.6
CAN.G965.5 Capsicum annuum HOM05D007371 ORTHO05D009319 6.5e-39 164.5 185 57.3
Solyc03g013600.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 6.5e-39 164.5 177 60.5
DCAR_032539 Daucus carota HOM05D007371 ORTHO05D009319 8.5e-39 164.1 177 60.5
Gohir.1Z049431 Gossypium hirsutum HOM05D007371 ORTHO05D009319 5.5e-38 161.4 180 60.0
Gohir.1Z049679 Gossypium hirsutum HOM05D007371 ORTHO05D009319 5.5e-38 161.4 180 60.0
Gohir.A02G134600 Gossypium hirsutum HOM05D007371 ORTHO05D009319 5.5e-38 161.4 180 60.0
Gohir.A09G046246 Gossypium hirsutum HOM05D007371 ORTHO05D009319 5.5e-38 161.4 180 60.0
Nn3g20215 Nelumbo nucifera HOM05D007371 ORTHO05D009319 9.3e-38 160.6 178 60.7
Nn064s42209 Nelumbo nucifera HOM05D007371 ORTHO05D009319 1.2e-37 160.2 178 60.7
RcHm_v2.0_Chr5g0017201 Rosa chinensis HOM05D007371 ORTHO05D009319 2.7e-37 159.1 180 57.8
RcHm_v2.0_CPg0502761 Rosa chinensis HOM05D007371 ORTHO05D009319 2.7e-37 159.1 180 57.8
PGR111G0032 Punica granatum HOM05D007371 ORTHO05D009319 3.6e-37 158.7 177 57.6
RcHm_v2.0_Chr5g0043021 Rosa chinensis HOM05D007371 ORTHO05D009319 7.9e-37 157.5 180 57.8
C09p24650 Brassica napus HOM05D007371 ORTHO05D009319 2.3e-36 156.0 177 55.9
C09p40180 Brassica napus HOM05D007371 ORTHO05D009319 2.3e-36 156.0 177 55.9
BolC2t10597H Brassica oleracea HOM05D007371 ORTHO05D009319 2.3e-36 156.0 177 55.9
BolSC29t60507H Brassica oleracea HOM05D007371 ORTHO05D009319 2.3e-36 156.0 177 55.9
BolSC29t60622H Brassica oleracea HOM05D007371 ORTHO05D009319 2.3e-36 156.0 177 55.9
BolSC37t60794H Brassica oleracea HOM05D007371 ORTHO05D009319 2.3e-36 156.0 177 55.9
BolSC47t61064H Brassica oleracea HOM05D007371 ORTHO05D009319 2.3e-36 156.0 177 55.9
BraA10t43431Z Brassica rapa HOM05D007371 ORTHO05D009319 2.3e-36 156.0 177 55.9
BraSC103t45430Z Brassica rapa HOM05D007371 ORTHO05D009319 2.3e-36 156.0 177 55.9
BraSC179t45773Z Brassica rapa HOM05D007371 ORTHO05D009319 2.3e-36 156.0 177 55.9
BraSC59t46552Z Brassica rapa HOM05D007371 ORTHO05D009319 2.3e-36 156.0 177 55.9
Migut.D01251 Erythranthe guttata HOM05D007371 ORTHO05D009319 6.7e-36 154.5 177 56.5
Medtr7g021710 Medicago truncatula HOM05D007371 ORTHO05D009319 6.7e-36 154.5 176 56.8
Lj2P1238T112 Lonicera japonica HOM05D007371 ORTHO05D009319 8.7e-36 154.1 177 56.5
Lju5009P0T52 Lonicera japonica HOM05D007371 ORTHO05D009319 8.7e-36 154.1 177 56.5
Medtr4g006110 Medicago truncatula HOM05D007371 ORTHO05D009319 8.7e-36 154.1 176 56.8
TAR625G0296 Trochodendron aralioides HOM05D007371 ORTHO05D009319 1.1e-35 153.7 178 58.4
ATCG01080 Arabidopsis thaliana HOM05D007371 ORTHO05D009319 1.9e-35 152.9 177 54.8
HanXRQChr00c0289g0573141 Helianthus annuus HOM05D007371 ORTHO05D009319 4.3e-35 151.8 178 57.3
HanXRQChr02g0059721 Helianthus annuus HOM05D007371 ORTHO05D009319 4.3e-35 151.8 178 57.3
HanXRQChr09g0258501 Helianthus annuus HOM05D007371 ORTHO05D009319 4.3e-35 151.8 178 57.3
HanXRQChr15g0465431 Helianthus annuus HOM05D007371 ORTHO05D009319 4.3e-35 151.8 178 57.3
HanXRQChr15g0465461 Helianthus annuus HOM05D007371 ORTHO05D009319 4.3e-35 151.8 178 57.3
HanXRQChr17g0569751 Helianthus annuus HOM05D007371 ORTHO05D009319 4.3e-35 151.8 178 57.3
HanXRQCPg0580341 Helianthus annuus HOM05D007371 ORTHO05D009319 4.3e-35 151.8 178 57.3
Solyc02g011770.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 4.3e-35 151.8 180 55.0
CARHR282450 Cardamine hirsuta HOM05D007371 ORTHO05D009319 5.7e-35 151.4 177 54.2
Lalb_Chr07g0191781 Lupinus albus HOM05D007371 ORTHO05D009319 5.7e-35 151.4 177 55.4
Medtr6g042220 Medicago truncatula HOM05D007371 ORTHO05D009319 5.7e-35 151.4 177 56.5
BolC9t56922H Brassica oleracea HOM05D007371 ORTHO05D009319 9.7e-35 150.6 177 53.1
PSO548G0046 Papaver somniferum HOM05D007371 ORTHO05D009319 9.7e-35 150.6 177 54.8
Lj9P89T22 Lonicera japonica HOM05D007371 ORTHO05D009319 2.2e-34 149.4 177 54.8
SalBow1G7973 Salvia bowleyana HOM05D007371 ORTHO05D009319 2.2e-34 149.4 177 54.2
AL9U11956 Arabidopsis lyrata HOM05D007371 ORTHO05D009319 3.7e-34 148.7 177 53.7
Medtr5g063410 Medicago truncatula HOM05D007371 ORTHO05D009319 5.0e-31 138.3 176 54.0
Gohir.D04G175100 Gossypium hirsutum HOM05D007371 ORTHO05D009319 3.0e-28 129.0 156 55.8
Nn1g08633 Nelumbo nucifera HOM05D007371 ORTHO05D009319 1.1e-27 127.1 163 54.6
Lsat_1_v5_gn_6_54121 Lactuca sativa HOM05D007371 ORTHO05D009319 2.0e-27 126.3 100 67.0
HanXRQChr17g0569721 Helianthus annuus HOM05D007371 ORTHO05D009319 5.7e-27 124.8 163 52.8
CAN.G256.22 Capsicum annuum HOM05D007371 ORTHO05D009319 4.1e-25 118.6 141 55.3
Gohir.D06G133700 Gossypium hirsutum HOM05D007371 ORTHO05D009319 7.7e-24 114.4 150 55.3
Gohir.D12G089301 Gossypium hirsutum HOM05D007371 ORTHO05D009319 2.2e-23 112.8 155 51.6
RcHm_v2.0_Chr4g0438011 Rosa chinensis HOM05D007371 ORTHO05D009319 4.2e-22 108.6 75 78.7
HanXRQChr01g0000251 Helianthus annuus HOM05D007371 ORTHO05D009319 1.6e-21 106.7 138 52.2
BolSC35t60705H Brassica oleracea HOM05D007371 ORTHO05D009319 2.1e-21 106.3 61 88.5
Nn031s41614 Nelumbo nucifera HOM05D007371 ORTHO05D009319 2.1e-21 106.3 61 90.2
Gohir.D07G194033 Gossypium hirsutum HOM05D007371 ORTHO05D009319 6.1e-21 104.8 61 88.5
HanXRQChr00c0336g0573671 Helianthus annuus HOM05D007371 ORTHO05D009319 7.9e-21 104.4 61 86.9
Gohir.A03G146201 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.4e-20 103.6 162 46.9
Thecc.08G131100 Theobroma cacao HOM05D007371 ORTHO05D009319 8.8e-20 100.9 61 86.9
Medtr0002s0160 Medicago truncatula HOM05D000533 ORTHO05D006151 3.3e-19 99.0 61 80.3
Solyc07g026910.3 Solanum lycopersicum HOM05D007371 ORTHO05D009319 4.4e-19 98.6 137 51.1
C09p40330 Brassica napus HOM05D007371 ORTHO05D009319 7.4e-19 97.8 62 85.5
BraSC25t45911Z Brassica rapa HOM05D007371 ORTHO05D009319 7.4e-19 97.8 55 89.1
arahy.Tifrunner.gnm1.ann1.4VL02K Arachis hypogaea HOM05D001200 ORTHO05D009778 1.1e-14 84.0 59 78.0
arahy.Tifrunner.gnm1.ann1.9I8ZI2 Arachis hypogaea HOM05D001200 ORTHO05D009778 1.1e-14 84.0 59 78.0
arahy.Tifrunner.gnm1.ann1.V71EA1 Arachis hypogaea HOM05D001200 ORTHO05D009778 1.1e-14 84.0 59 78.0
Solyc11g021217.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 9.4e-14 80.9 47 91.5
Lalb_Chr09g0335451 Lupinus albus HOM05D007371 ORTHO05D009319 3.6e-13 79.0 47 85.1
Glyma.19G081000 Glycine max HOM05D007371 ORTHO05D009319 1.4e-12 77.0 129 45.0
Hund24330 Selenicereus undatus HOM05D007371 ORTHO05D009319 1.4e-12 77.0 81 49.4
CAN.G262.7 Capsicum annuum HOM05D007371 ORTHO05D009319 1.8e-12 76.6 47 85.1
BolC2t10612H Brassica oleracea HOM05D007371 ORTHO05D009319 3.0e-12 75.9 47 83.0
BolSC29t60547H Brassica oleracea HOM05D007371 ORTHO05D009319 3.0e-12 75.9 47 83.0
BolSC35t60691H Brassica oleracea HOM05D007371 ORTHO05D009319 3.0e-12 75.9 47 83.0
BolSC45t60908H Brassica oleracea HOM05D007371 ORTHO05D009319 3.0e-12 75.9 47 83.0
BolSC46t60957H Brassica oleracea HOM05D007371 ORTHO05D009319 3.0e-12 75.9 47 83.0
BolSC49t61144H Brassica oleracea HOM05D007371 ORTHO05D009319 3.0e-12 75.9 47 83.0
BolSC56t61236H Brassica oleracea HOM05D007371 ORTHO05D009319 3.0e-12 75.9 47 83.0
BraSC143t45659Z Brassica rapa HOM05D007371 ORTHO05D009319 3.0e-12 75.9 47 83.0
BolC7t43856H Brassica oleracea HOM05D007371 ORTHO05D009319 5.2e-12 75.1 47 80.9
HanXRQChr00c0703g0576941 Helianthus annuus HOM05D007371 ORTHO05D009319 1.2e-11 73.9 47 85.1
Gorai.005G189900 Gossypium raimondii HOM05D007371 ORTHO05D009319 3.3e-11 72.4 40 85.0
Potri.013G075100 Populus trichocarpa HOM05D007371 ORTHO05D009319 4.4e-11 72.0 42 88.1
HanXRQChr05g0152451 Helianthus annuus HOM05D007371 ORTHO05D009319 9.7e-11 70.9 36 88.9
HanXRQChr08g0211951 Helianthus annuus HOM05D007371 ORTHO05D009319 9.7e-11 70.9 36 88.9
BraSC58t46462Z Brassica rapa HOM05D007371 ORTHO05D009319 1.3e-10 70.5 37 83.8
arahy.Tifrunner.gnm1.ann1.5E4H9C Arachis hypogaea HOM05D007371 ORTHO05D009319 4.8e-10 68.6 47 74.5
Hma1.2p1_0656F.1_g196806 Hydrangea macrophylla HOM05D007371 ORTHO05D009319 2.0e-08 63.2 35 94.3
Oeu012763.1 Olea europaea HOM05D033615 ORTHO05D043133 4.5e-08 62.0 34 76.5
Gohir.D02G169550 Gossypium hirsutum HOM05D007371 ORTHO05D009319 3.8e-07 58.9 36 75.0
arahy.Tifrunner.gnm1.ann1.UDKX9E Arachis hypogaea HOM05D000890 ORTHO05D000697 6.5e-07 58.2 29 86.2
HanXRQChr02g0038001 Helianthus annuus HOM05D007371 ORTHO05D009319 1.1e-06 57.4 47 68.1
C02p24280 Brassica napus HOM05D007371 ORTHO05D009319 7.2e-06 54.7 127 34.6


User provided reference genes

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