Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007976g0020 Nicotiana tabacum HOM05D005568 ORTHO05D006940 4.5e-147 524.6 275 100.0
Peaxi162Scf00175g00125 Petunia axillaris HOM05D005568 ORTHO05D006940 2.0e-70 270.0 271 59.0
Sopen05g007120 Solanum pennellii HOM05D005568 ORTHO05D006940 2.0e-70 270.0 271 59.4
Solyc05g012290.3 Solanum lycopersicum HOM05D005568 ORTHO05D006940 4.4e-70 268.9 271 59.8
PGSC0003DMG400028318 Solanum tuberosum HOM05D005568 ORTHO05D006940 1.9e-68 263.5 272 58.8
CAN.G616.43 Capsicum annuum HOM05D005568 ORTHO05D006940 6.0e-67 258.5 271 57.6
Nitab4.5_0001487g0140 Nicotiana tabacum HOM05D005568 ORTHO05D006940 1.4e-63 247.3 248 60.5
Actinidia16167 Actinidia chinensis HOM05D005568 ORTHO05D006940 4.2e-60 235.7 271 52.8
Ciclev10031554m.g Citrus clementina HOM05D005568 ORTHO05D006940 7.1e-60 235.0 270 52.2
Hma1.2p1_0566F.1_g179750 Hydrangea macrophylla HOM05D005568 ORTHO05D006940 9.3e-60 234.6 271 51.7
DCAR_030041 Daucus carota HOM05D005568 ORTHO05D006940 4.6e-59 232.3 271 50.6
Migut.L01192 Erythranthe guttata HOM05D005568 ORTHO05D006940 7.9e-59 231.5 271 51.3
TAR622G0890 Trochodendron aralioides HOM05D005568 ORTHO05D006940 7.9e-59 231.5 270 53.0
FAN22G1579 Fragaria x ananassa HOM05D005568 ORTHO05D006940 1.3e-58 230.7 271 52.0
vmacro10423 Vaccinium macrocarpon HOM05D005568 ORTHO05D006940 1.7e-58 230.3 277 50.9
Atru.BG.280.p Acer truncatum HOM05D005568 ORTHO05D006940 2.3e-58 229.9 254 53.1
Oeu004582.1 Olea europaea HOM05D005568 ORTHO05D006940 3.0e-58 229.6 282 49.3
Rhsim09G0127600 Rhododendron simsii HOM05D005568 ORTHO05D006940 5.1e-58 228.8 279 50.5
Prupe.1G286700 Prunus persica HOM05D005568 ORTHO05D006940 1.5e-57 227.3 269 51.3
Cc11_g11980 Coffea canephora HOM05D005568 ORTHO05D006940 1.9e-57 226.9 271 50.6
Duzib248G1642 Durio zibethinus HOM05D005568 ORTHO05D006940 4.3e-57 225.7 271 50.2
Thecc.02G330600 Theobroma cacao HOM05D005568 ORTHO05D006940 7.3e-57 224.9 271 51.3
COL.COLO4_27886 Corchorus olitorius HOM05D005568 ORTHO05D006940 9.6e-57 224.6 270 51.5
Lj6A779T68 Lonicera japonica HOM05D005568 ORTHO05D006940 1.3e-56 224.2 271 51.3
FAN17G2544 Fragaria x ananassa HOM05D005568 ORTHO05D006940 2.1e-56 223.4 272 50.7
MD16G1061400 Malus domestica HOM05D005568 ORTHO05D006940 3.6e-56 222.6 269 50.2
Potri.008G095700 Populus trichocarpa HOM05D005568 ORTHO05D006940 3.6e-56 222.6 271 49.8
Aqoxy3G03640 Aquilegia oxysepala HOM05D005568 ORTHO05D006940 4.8e-56 222.2 271 48.3
FvH4_4g30090 Fragaria vesca HOM05D005568 ORTHO05D006940 4.8e-56 222.2 271 50.6
FAN12G3709 Fragaria x ananassa HOM05D005568 ORTHO05D006940 4.8e-56 222.2 271 50.6
Manes.01G027700 Manihot esculenta HOM05D005568 ORTHO05D006940 4.8e-56 222.2 270 50.0
Atru.chr11.1627 Acer truncatum HOM05D005568 ORTHO05D006940 8.1e-56 221.5 271 50.6
CiPaw.05G125400 Carya illinoinensis HOM05D005568 ORTHO05D006940 1.1e-55 221.1 271 49.8
QL12p030796 Quercus lobata HOM05D005568 ORTHO05D006940 1.1e-55 221.1 278 49.3
TPR.G24479 Trifolium pratense HOM05D005568 ORTHO05D006940 1.1e-55 221.1 271 48.3
GSVIVG01012218001 Vitis vinifera HOM05D005568 ORTHO05D006940 1.4e-55 220.7 271 50.2
AUR62036400 Chenopodium quinoa HOM05D005568 ORTHO05D006940 2.4e-55 219.9 243 54.7
SalBow2G0760 Salvia bowleyana HOM05D005568 ORTHO05D006940 2.4e-55 219.9 271 48.7
Cpa.g.sc1.123 Carica papaya HOM05D005568 ORTHO05D006940 3.1e-55 219.5 293 46.1
ECA233G1797 Erigeron canadensis HOM05D005568 ORTHO05D006940 4.0e-55 219.2 272 49.6
HanXRQChr08g0211781 Helianthus annuus HOM05D005568 ORTHO05D006940 4.0e-55 219.2 272 51.1
arahy.Tifrunner.gnm1.ann1.H69QIP Arachis hypogaea HOM05D005568 ORTHO05D006940 5.3e-55 218.8 274 48.5
Gohir.D12G164600 Gossypium hirsutum HOM05D005568 ORTHO05D006940 6.9e-55 218.4 269 49.8
Gorai.008G177200 Gossypium raimondii HOM05D005568 ORTHO05D006940 6.9e-55 218.4 269 49.8
Lalb_Chr10g0098831 Lupinus albus HOM05D005568 ORTHO05D006940 6.9e-55 218.4 272 49.3
Sabra08G0072100 Salix brachista HOM05D005568 ORTHO05D006940 6.9e-55 218.4 287 46.7
Medtr5g044720 Medicago truncatula HOM05D005568 ORTHO05D006940 1.5e-54 217.2 271 46.9
TWI31G1152 Tripterygium wilfordii HOM05D005568 ORTHO05D006940 1.5e-54 217.2 271 50.6
Glyma.01G059200 Glycine max HOM05D005568 ORTHO05D006940 3.4e-54 216.1 271 47.6
Gohir.A12G161300 Gossypium hirsutum HOM05D005568 ORTHO05D006940 5.8e-54 215.3 269 49.8
Nitab4.5_0000231g0340 Nicotiana tabacum HOM05D005568 ORTHO05D006940 5.8e-54 215.3 208 60.6
CsaV3_6G033680 Cucumis sativus L. HOM05D005568 ORTHO05D006940 7.6e-54 214.9 279 49.1
Ah.12g059120 Amaranthus hybridus HOM05D005568 ORTHO05D006940 9.9e-54 214.5 271 48.7
CARHR014160 Cardamine hirsuta HOM05D005568 ORTHO05D006940 1.3e-53 214.2 272 46.7
Lsat_1_v5_gn_8_46541 Lactuca sativa HOM05D005568 ORTHO05D006940 1.3e-53 214.2 271 49.1
Hund10887 Selenicereus undatus HOM05D005568 ORTHO05D006940 1.3e-53 214.2 275 48.7
Phvul.003G042500 Phaseolus vulgaris HOM05D005568 ORTHO05D006940 1.7e-53 213.8 281 44.8
THA.LOC104824056 Tarenaya hassleriana HOM05D005568 ORTHO05D006940 2.9e-53 213.0 269 49.1
VMungo1215G2929 Vigna mungo HOM05D005568 ORTHO05D006940 3.8e-53 212.6 279 45.9
Lj2g0017860 Lotus japonicus HOM05D005568 ORTHO05D006940 4.9e-53 212.2 271 45.8
Sed0026263 Sechium edule HOM05D005568 ORTHO05D006940 6.4e-53 211.8 269 49.4
FAN07G0232 Fragaria x ananassa HOM05D005568 ORTHO05D006940 8.4e-53 211.5 297 46.8
AL1G25570 Arabidopsis lyrata HOM05D005568 ORTHO05D006940 4.2e-52 209.1 272 46.7
EL10Ac5g12478 Beta vulgaris HOM05D005568 ORTHO05D006940 4.2e-52 209.1 271 47.6
Sp1g12160 Schrenkiella parvula HOM05D005568 ORTHO05D006940 4.2e-52 209.1 272 46.0
CANSAT64G0560 Cannabis sativa HOM05D005568 ORTHO05D006940 9.3e-52 208.0 269 47.2
PSO017G2580 Papaver somniferum HOM05D005568 ORTHO05D006940 9.3e-52 208.0 269 47.6
MELO3C011420.2 Cucumis melo HOM05D005568 ORTHO05D006940 2.1e-51 206.8 279 47.3
Aa31LG1G1170 Aethionema arabicum HOM05D005568 ORTHO05D006940 2.7e-51 206.5 266 45.9
PSO478G2131 Papaver somniferum HOM05D005568 ORTHO05D006940 2.7e-51 206.5 269 47.6
A06p09820 Brassica napus HOM05D005568 ORTHO05D006940 3.5e-51 206.1 269 46.5
PGR102G3278 Punica granatum HOM05D005568 ORTHO05D006940 3.5e-51 206.1 269 47.2
ClCG08G010410 Citrullus lanatus HOM05D005568 ORTHO05D006940 1.0e-50 204.5 277 47.3
Carub.0001s1349 Capsella rubella HOM05D005568 ORTHO05D006940 1.3e-50 204.1 272 45.6
C05p11620 Brassica napus HOM05D005568 ORTHO05D006940 1.8e-50 203.8 272 46.0
BolC5t29908H Brassica oleracea HOM05D005568 ORTHO05D006940 1.8e-50 203.8 272 46.0
Thhalv10007655m.g Eutrema salsugineum HOM05D005568 ORTHO05D006940 1.8e-50 203.8 272 45.6
BraA06t24172Z Brassica rapa HOM05D005568 ORTHO05D006940 3.0e-50 203.0 269 46.1
BcaB02g06475 Brassica carinata HOM05D005568 ORTHO05D006940 3.9e-50 202.6 272 45.2
BcaC05g25284 Brassica carinata HOM05D005568 ORTHO05D006940 5.1e-50 202.2 272 45.2
AT1G13770 Arabidopsis thaliana HOM05D005568 ORTHO05D006940 6.7e-50 201.8 263 46.0
arahy.Tifrunner.gnm1.ann1.MYF1K6 Arachis hypogaea HOM05D005568 ORTHO05D006940 6.7e-50 201.8 275 45.8
ATR0907G009 Amborella trichopoda HOM05D005568 ORTHO05D006940 8.7e-50 201.4 279 43.0
Nn3g17444 Nelumbo nucifera HOM05D005568 ORTHO05D006940 3.7e-48 196.1 248 49.2
CSS0039095 Camellia sinensis var. sinensis HOM05D005568 ORTHO05D006940 1.4e-47 194.1 231 51.5
SGA_v2.0_scaffold36G14456 Striga asiatica HOM05D005568 ORTHO05D006940 1.8e-47 193.7 243 49.8
Haze_11911 Corylus avellana HOM05D005568 ORTHO05D006940 9.0e-47 191.4 276 47.1
Zm00001eb400240 Zea mays HOM05D005568 ORTHO05D006940 1.7e-45 187.2 277 43.7
AUR62030755 Chenopodium quinoa HOM05D005568 ORTHO05D006940 4.9e-45 185.7 290 44.8
Ca_04974_v3 Cicer arietinum L. HOM05D005568 ORTHO05D006940 1.1e-41 174.5 143 66.4
Eucgr.B03151 Eucalyptus grandis HOM05D005568 ORTHO05D006940 1.5e-41 174.1 155 62.6
Dinv16731 Davidia involucrata HOM05D005568 ORTHO05D006940 2.5e-41 173.3 147 66.0
Oeu025279.1 Olea europaea HOM05D005568 ORTHO05D006940 4.8e-40 169.1 143 64.3
Sc11g0002440 Simmondsia chinensis HOM05D005568 ORTHO05D006940 1.8e-39 167.2 143 63.6
CBR_g29960 Chara braunii HOM05D005568 ORTHO05D006940 5.5e-36 155.6 276 37.0
Glyma.02G116633 Glycine max HOM05D005568 ORTHO05D006940 9.3e-36 154.8 121 68.6
Pp3c17_20490 Physcomitrium patens HOM05D005568 ORTHO05D006940 9.3e-36 154.8 277 38.6
unitig_22.g6492 Utricularia gibba HOM05D005568 ORTHO05D006940 2.1e-35 153.7 229 45.9
AagrBONN_evm.TU.Sc2ySwM_117.168 Anthoceros agrestis HOM05D005568 ORTHO05D006940 2.7e-35 153.3 280 37.5
SEGI_27210 Sequoiadendron giganteum HOM05D005568 ORTHO05D006940 3.3e-33 146.4 139 57.6
RcHm_v2.0_Chr4g0438391 Rosa chinensis HOM05D005568 ORTHO05D006940 5.7e-33 145.6 288 38.9
Duzib248G1426 Durio zibethinus HOM05D005568 ORTHO05D006940 7.4e-33 145.2 143 60.1
HPP92_024923 Vanilla planifolia HOM05D005568 ORTHO05D006940 6.3e-32 142.1 122 63.1
CDE05G1057 Ceratophyllum demersum HOM05D005568 ORTHO05D006940 8.2e-32 141.7 116 62.9
MBI16_g24180_MAGBIO Magnolia biondii HOM05D005568 ORTHO05D006940 1.5e-30 137.5 300 37.3
Mapoly0001s0066 Marchantia polymorpha HOM05D005568 ORTHO05D006940 2.9e-29 133.3 137 52.6
SMO343G0031 Selaginella moellendorffii HOM05D005568 ORTHO05D006940 7.2e-28 128.6 142 50.0
arahy.Tifrunner.gnm1.ann1.TQ64T1 Arachis hypogaea HOM05D005568 ORTHO05D006940 9.4e-28 128.3 191 41.9
DCAR_007195 Daucus carota HOM05D005568 ORTHO05D006940 1.2e-27 127.9 103 68.9
SMO367G0699 Selaginella moellendorffii HOM05D005568 ORTHO05D006940 1.4e-23 114.4 111 54.1
Nitab4.5_0004308g0080 Nicotiana tabacum HOM05D005568 ORTHO05D006940 1.7e-21 107.5 63 90.5
Ca_27228_v3 Cicer arietinum L. HOM05D005568 ORTHO05D006940 4.2e-20 102.8 90 64.4
Hma1.2p1_0354F.1_g133380 Hydrangea macrophylla HOM05D005568 ORTHO05D006940 3.3e-17 93.2 224 34.8
MCO13G536 Micromonas commoda HOM05D005568 ORTHO05D006940 1.7e-16 90.9 141 41.1
PRCOL_00005711 Prasinoderma coloniale HOM05D005568 ORTHO05D006940 4.5e-14 82.8 95 48.4
arahy.Tifrunner.gnm1.ann1.0F7ZXJ Arachis hypogaea HOM05D005568 ORTHO05D006940 1.5e-12 77.8 71 60.6
Cre16.g671150 Chlamydomonas reinhardtii HOM05D005568 ORTHO05D006940 5.5e-12 75.9 174 32.8
QL03p072672 Quercus lobata HOM05D005568 ORTHO05D006940 3.0e-10 70.1 65 50.8
Cfa022043 Carpinus fangiana HOM05D002321 ORTHO05D006940 1.5e-09 67.8 178 29.8
GSVIVG01031111001 Vitis vinifera HOM05D005568 ORTHO05D006940 2.8e-08 63.5 53 56.6
Glyma.02G116567 Glycine max HOM05D005568 ORTHO05D006940 4.8e-08 62.8 65 46.2
Psat2g130160 Pisum sativum HOM05D005568 ORTHO05D006940 1.4e-07 61.2 49 65.3
SEGI_02746 Sequoiadendron giganteum HOM05D005568 ORTHO05D006940 1.8e-07 60.8 157 32.5
HPP92_024922 Vanilla planifolia HOM05D005568 ORTHO05D006940 9.1e-07 58.5 66 42.4
Nitab4.5_0000511g0110 Nicotiana tabacum HOM05D007005 ORTHO05D008799 1.2e-06 58.2 203 27.6
Sed0008022 Sechium edule HOM05D007005 ORTHO05D008799 2.0e-06 57.4 145 29.0
Nitab4.5_0000335g0230 Nicotiana tabacum HOM05D007005 ORTHO05D008799 3.5e-06 56.6 203 27.6
Oeu064505.1 Olea europaea HOM05D007005 ORTHO05D008799 5.9e-06 55.8 146 28.8
Thhalv10013293m.g Eutrema salsugineum HOM05D007005 ORTHO05D008799 7.7e-06 55.5 277 22.7


User provided reference genes

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