Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007973g0020 Nicotiana tabacum HOM05D007103 ORTHO05D008948 2.6e-232 808.5 459 100.0
Nitab4.5_0000129g0430 Nicotiana tabacum HOM05D007103 ORTHO05D008948 2.6e-216 755.4 451 95.1
Solyc04g008560.3 Solanum lycopersicum HOM05D007103 ORTHO05D008948 1.0e-199 700.3 451 87.8
PGSC0003DMG400031375 Solanum tuberosum HOM05D007103 ORTHO05D008948 2.9e-199 698.7 451 88.0
Sopen04g003720 Solanum pennellii HOM05D007103 ORTHO05D008948 6.5e-199 697.6 451 87.4
Peaxi162Scf00329g00938 Petunia axillaris HOM05D007103 ORTHO05D008948 1.0e-183 647.1 452 84.3
CAN.G458.2 Capsicum annuum HOM05D007103 ORTHO05D008948 1.1e-169 600.5 397 82.9
Lj3A854G74 Lonicera japonica HOM05D007103 ORTHO05D008948 2.6e-147 526.2 472 61.2
Dinv06214 Davidia involucrata HOM05D007103 ORTHO05D008948 4.9e-146 521.9 455 66.2
MSTRG.2093 Avicennia marina HOM05D007103 ORTHO05D008948 1.1e-145 520.8 456 62.3
GSVIVG01010248001 Vitis vinifera HOM05D007103 ORTHO05D008948 5.4e-145 518.5 458 63.3
TAR371G1171 Trochodendron aralioides HOM05D007103 ORTHO05D008948 8.9e-140 501.1 456 63.6
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 1.5e-139 500.4 456 66.4
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 9.8e-139 497.7 455 59.6
HanXRQChr14g0446891 Helianthus annuus HOM05D007103 ORTHO05D008948 8.3e-138 494.6 453 62.0
Cfa015108 Carpinus fangiana HOM05D007103 ORTHO05D008948 5.4e-137 491.9 456 62.5
Haze_01571 Corylus avellana HOM05D007103 ORTHO05D008948 2.7e-136 489.6 454 61.9
PGR044G1063 Punica granatum HOM05D007103 ORTHO05D008948 4.6e-136 488.8 456 60.7
SGA_v2.0_scaffold127G33990 Striga asiatica HOM05D007103 ORTHO05D008948 1.7e-135 486.9 465 60.4
Manes.10G065901 Manihot esculenta HOM05D007103 ORTHO05D008948 1.1e-134 484.2 463 58.7
Migut.E00576 Erythranthe guttata HOM05D007103 ORTHO05D008948 2.5e-134 483.0 490 57.8
Eucgr.B02623 Eucalyptus grandis HOM05D007103 ORTHO05D008948 5.6e-134 481.9 455 64.0
Prupe.1G342500 Prunus persica HOM05D007103 ORTHO05D008948 2.1e-133 479.9 464 59.5
QL03p041867 Quercus lobata HOM05D007103 ORTHO05D008948 3.6e-133 479.2 457 66.1
MELO3C005211.2 Cucumis melo HOM05D007103 ORTHO05D008948 6.2e-133 478.4 455 60.7
Ciclev10005118m.g Citrus clementina HOM05D007103 ORTHO05D008948 4.0e-132 475.7 383 72.3
Thecc.02G296200 Theobroma cacao HOM05D007103 ORTHO05D008948 6.8e-132 474.9 457 59.1
unitig_8.g4025 Utricularia gibba HOM05D007103 ORTHO05D008948 1.5e-131 473.8 452 56.9
CsaV3_5G017430 Cucumis sativus L. HOM05D007103 ORTHO05D008948 2.6e-131 473.0 455 59.1
Sed0022925 Sechium edule HOM05D007103 ORTHO05D008948 7.5e-131 471.5 455 58.9
Rhsim04G0168800 Rhododendron simsii HOM05D007103 ORTHO05D008948 1.3e-130 470.7 517 53.4
Nn3g18722 Nelumbo nucifera HOM05D007103 ORTHO05D008948 2.9e-130 469.5 445 64.0
RcHm_v2.0_Chr4g0446051 Rosa chinensis HOM05D007103 ORTHO05D008948 8.3e-130 468.0 463 59.0
Sabra08G0108900 Salix brachista HOM05D007103 ORTHO05D008948 7.0e-129 464.9 462 56.5
COL.COLO4_27515 Corchorus olitorius HOM05D007103 ORTHO05D008948 2.3e-127 459.9 461 56.4
CANSAT78G0644 Cannabis sativa HOM05D007103 ORTHO05D008948 1.5e-126 457.2 456 61.6
DCAR_030327 Daucus carota HOM05D007103 ORTHO05D008948 3.3e-126 456.1 456 60.3
THA.LOC104805941 Tarenaya hassleriana HOM05D007103 ORTHO05D008948 1.2e-125 454.1 461 59.4
Gorai.002G168100 Gossypium raimondii HOM05D007103 ORTHO05D008948 3.6e-125 452.6 458 59.4
Gohir.D01G137900 Gossypium hirsutum HOM05D007103 ORTHO05D008948 8.1e-125 451.4 458 59.0
Gohir.A01G145152 Gossypium hirsutum HOM05D007103 ORTHO05D008948 5.8e-123 445.3 458 57.9
Lsat_1_v5_gn_3_27560 Lactuca sativa HOM05D007103 ORTHO05D008948 3.7e-122 442.6 453 62.7
Glyma.05G135400 Glycine max HOM05D007103 ORTHO05D008948 1.1e-121 441.0 458 55.2
MD13G1010500 Malus domestica HOM05D007103 ORTHO05D008948 3.5e-120 436.0 470 55.5
vmacro08589 Vaccinium macrocarpon HOM05D007103 ORTHO05D008948 1.1e-118 431.0 353 66.9
CDE08G0078 Ceratophyllum demersum HOM05D007103 ORTHO05D008948 1.9e-118 430.3 455 53.6
FAN17G1256 Fragaria x ananassa HOM05D007103 ORTHO05D008948 5.6e-118 428.7 470 54.3
Potri.008G143700 Populus trichocarpa HOM05D007103 ORTHO05D008948 7.3e-118 428.3 433 55.0
arahy.Tifrunner.gnm1.ann1.U7H2Z0 Arachis hypogaea HOM05D007103 ORTHO05D008948 2.1e-117 426.8 454 54.0
arahy.Tifrunner.gnm1.ann1.CDY64E Arachis hypogaea HOM05D007103 ORTHO05D008948 2.8e-117 426.4 454 54.0
Sp2g13560 Schrenkiella parvula HOM05D007103 ORTHO05D008948 2.8e-117 426.4 465 56.8
FAN07G2615 Fragaria x ananassa HOM05D007103 ORTHO05D008948 3.6e-117 426.0 469 53.7
HPP92_022082 Vanilla planifolia HOM05D007103 ORTHO05D008948 8.1e-117 424.9 465 54.6
Ca_18212_v3 Cicer arietinum L. HOM05D007103 ORTHO05D008948 1.1e-116 424.5 454 53.7
ECA246G2851 Erigeron canadensis HOM05D007103 ORTHO05D008948 1.8e-116 423.7 453 55.0
FAN12G1264 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.8e-116 423.7 469 53.9
AL5G11410 Arabidopsis lyrata HOM05D007103 ORTHO05D008948 5.2e-116 422.2 468 55.8
PSO478G2004 Papaver somniferum HOM05D007103 ORTHO05D008948 6.8e-116 421.8 459 54.5
Carub.0005s0121 Capsella rubella HOM05D007103 ORTHO05D008948 8.9e-116 421.4 459 55.6
MBI06_g12320_MAGBIO Magnolia biondii HOM05D007103 ORTHO05D008948 5.8e-115 418.7 326 67.5
ATR0618G149 Amborella trichopoda HOM05D007103 ORTHO05D008948 9.9e-115 417.9 456 56.1
CiPaw.05G161900 Carya illinoinensis HOM05D007103 ORTHO05D008948 9.9e-115 417.9 345 66.1
Lalb_Chr13g0293061 Lupinus albus HOM05D007103 ORTHO05D008948 8.4e-114 414.8 456 53.9
Psat7g086680 Pisum sativum HOM05D007103 ORTHO05D008948 1.2e-112 411.0 457 51.2
ClCG01G007020 Citrullus lanatus HOM05D007103 ORTHO05D008948 3.5e-112 409.5 351 61.3
Glyma.08G090600 Glycine max HOM05D007103 ORTHO05D008948 1.3e-111 407.5 380 59.2
Aa31LG2G7810 Aethionema arabicum HOM05D007103 ORTHO05D008948 3.0e-111 406.4 460 56.3
CARHR144820 Cardamine hirsuta HOM05D007103 ORTHO05D008948 5.6e-110 402.1 470 56.0
Aqoxy3G00022 Aquilegia oxysepala HOM05D007103 ORTHO05D008948 1.2e-109 401.0 375 63.5
Lj4g0001083 Lotus japonicus HOM05D007103 ORTHO05D008948 8.1e-109 398.3 461 50.5
Actinidia32355 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.4e-108 397.5 343 63.6
Thhalv10004194m.g Eutrema salsugineum HOM05D007103 ORTHO05D008948 9.0e-108 394.8 471 54.4
AT2G02148 Arabidopsis thaliana HOM05D007103 ORTHO05D008948 1.7e-106 390.6 461 54.0
C09p30690 Brassica napus HOM05D007103 ORTHO05D008948 1.7e-106 390.6 458 53.5
BcaC04g21529 Brassica carinata HOM05D007103 ORTHO05D008948 4.9e-106 389.0 458 53.9
BraA09t37988Z Brassica rapa HOM05D007103 ORTHO05D008948 8.4e-106 388.3 456 53.3
BolC9t55934H Brassica oleracea HOM05D007103 ORTHO05D008948 1.9e-105 387.1 461 53.4
TPR.G34765 Trifolium pratense HOM05D007103 ORTHO05D008948 2.4e-105 386.7 473 49.3
Sc03g0005470 Simmondsia chinensis HOM05D007103 ORTHO05D008948 1.6e-104 384.0 464 51.7
BcaB07g30707 Brassica carinata HOM05D007103 ORTHO05D008948 2.3e-103 380.2 459 51.2
A09p23820 Brassica napus HOM05D007103 ORTHO05D008948 2.3e-103 380.2 458 52.4
Ciclev10010767m.g Citrus clementina HOM05D007103 ORTHO05D008948 1.3e-101 374.4 248 74.2
AUR62003469 Chenopodium quinoa HOM05D007103 ORTHO05D008948 2.4e-100 370.2 457 48.8
Phvul.002G186800 Phaseolus vulgaris HOM05D007103 ORTHO05D008948 1.5e-99 367.5 453 49.0
FvH4_4g36300 Fragaria vesca HOM05D007103 ORTHO05D008948 1.8e-95 354.0 361 53.5
SalBow2G1702 Salvia bowleyana HOM05D007103 ORTHO05D008948 2.8e-93 346.7 287 66.9
Zm00001eb228800 Zea mays HOM05D007103 ORTHO05D008948 3.7e-93 346.3 387 50.9
PSO017G4620 Papaver somniferum HOM05D007103 ORTHO05D008948 1.4e-92 344.4 370 52.4
AUR62017776 Chenopodium quinoa HOM05D007103 ORTHO05D008948 5.3e-92 342.4 409 49.6
FAN22G0934 Fragaria x ananassa HOM05D007103 ORTHO05D008948 5.3e-92 342.4 357 52.4
EL10Ac6g15409 Beta vulgaris HOM05D007103 ORTHO05D008948 4.2e-89 332.8 532 43.2
VMungo0251G2627 Vigna mungo HOM05D007103 ORTHO05D008948 1.3e-85 321.2 404 48.8
BcaB07g30709 Brassica carinata HOM05D007103 ORTHO05D008948 3.4e-83 313.2 452 43.4
SEGI_34932 Sequoiadendron giganteum HOM05D007103 ORTHO05D008948 9.3e-81 305.1 299 53.2
Actinidia25204 Actinidia chinensis HOM05D007103 ORTHO05D008948 7.9e-72 275.4 179 77.1
Mapoly0001s0015 Marchantia polymorpha HOM05D007103 ORTHO05D008948 7.4e-70 268.9 481 38.0
SMO358G0481 Selaginella moellendorffii HOM05D007103 ORTHO05D008948 7.4e-70 268.9 458 37.6
Atru.chr11.1054 Acer truncatum HOM05D007103 ORTHO05D008948 4.2e-65 253.1 443 43.8
Pp3c6_26300 Physcomitrium patens HOM05D007103 ORTHO05D008948 5.1e-63 246.1 493 40.0
Pp3c5_2140 Physcomitrium patens HOM05D007103 ORTHO05D008948 3.3e-62 243.4 493 39.4
CBR_g70721 Chara braunii HOM05D007103 ORTHO05D008948 5.2e-55 219.5 344 37.2
Actinidia31381 Actinidia chinensis HOM05D007103 ORTHO05D008948 2.0e-54 217.6 377 48.0
AagrBONN_evm.TU.Sc2ySwM_368.3256 Anthoceros agrestis HOM05D007103 ORTHO05D008948 1.2e-51 208.4 196 53.6
Cpa.g.sc2.105 Carica papaya HOM05D007103 ORTHO05D008948 2.1e-48 197.6 229 52.8
Medtr5g010860 Medicago truncatula HOM05D007103 ORTHO05D008948 6.7e-47 192.6 197 57.9
Pp3c6_29570 Physcomitrium patens HOM05D007103 ORTHO05D008948 2.3e-31 141.0 193 40.4
Lsat_1_v5_gn_3_133181 Lactuca sativa HOM05D003297 ORTHO05D004027 1.4e-23 115.2 162 51.9
CAN.G166.15 Capsicum annuum HOM05D007103 ORTHO05D008948 1.7e-21 108.2 83 67.5
Hund18263 Selenicereus undatus HOM05D007103 ORTHO05D008948 1.7e-13 81.6 180 37.8
Cpa.g.sc2.103 Carica papaya HOM05D007103 ORTHO05D008948 1.2e-11 75.5 62 61.3
Medtr6g043130 Medicago truncatula HOM05D007103 ORTHO05D008948 5.6e-09 66.6 42 73.8
Aa31LG1G6410 Aethionema arabicum HOM05D007103 ORTHO05D008948 1.2e-06 58.9 120 41.7


User provided reference genes

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