Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007963g0090 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.7e-63 245.7 116 100.0
Nitab4.5_0007582g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000006 9.7e-19 97.1 100 53.0
Nitab4.5_0000491g0040 Nicotiana tabacum HOM05D008844 ORTHO05D000006 5.3e-17 91.3 59 72.9
Nitab4.5_0007582g0060 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.0e-16 89.4 95 52.6
Nitab4.5_0027927g0020 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.7e-15 86.3 79 55.7
Nitab4.5_0001676g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.1e-14 83.6 78 55.1
Nitab4.5_0001158g0070 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.5e-14 83.2 76 52.6
Nitab4.5_0002924g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.9e-14 82.8 74 55.4
Nitab4.5_0002249g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-13 79.3 69 59.4
Nitab4.5_0000541g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.0e-12 77.0 75 54.7
Nitab4.5_0003601g0040 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.2e-11 73.6 69 52.2
Nitab4.5_0005413g0080 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.2e-11 73.6 74 50.0
Nitab4.5_0002590g0020 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.6e-11 72.4 65 53.8
Nitab4.5_0005100g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.4e-11 72.0 75 48.0
Nitab4.5_0005859g0030 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.8e-10 68.9 70 50.0
PGSC0003DMG400013768 Solanum tuberosum HOM05D000003 ORTHO05D000004 3.7e-10 68.6 47 66.0
Nitab4.5_0001660g0060 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.8e-09 66.2 65 52.3
Nitab4.5_0000540g0160 Nicotiana tabacum HOM05D008844 ORTHO05D000006 3.1e-09 65.5 65 50.8
Nitab4.5_0001027g0060 Nicotiana tabacum HOM05D008844 ORTHO05D000006 9.1e-09 63.9 67 49.3
Peaxi162Scf01188g00002 Petunia axillaris HOM05D008844 ORTHO05D000006 1.2e-08 63.5 71 46.5
Nitab4.5_0000244g0250 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.6e-08 63.2 51 62.7
Nitab4.5_0028335g0010 Nicotiana tabacum HOM05D045504 ORTHO05D000006 1.6e-08 63.2 72 43.1
Nitab4.5_0000396g0200 Nicotiana tabacum HOM05D011951 ORTHO05D000006 2.0e-08 62.8 71 45.1
Nitab4.5_0007986g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-08 62.8 75 44.0
Nitab4.5_0001287g0180 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-08 62.4 64 53.1
Nitab4.5_0000031g0300 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.0e-07 60.5 59 52.5
Nitab4.5_0000355g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-07 60.5 79 43.0
Nitab4.5_0001569g0210 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.0e-07 60.5 64 50.0
Nitab4.5_0000832g0100 Nicotiana tabacum HOM05D026524 ORTHO05D000006 1.3e-07 60.1 62 48.4
Nitab4.5_0002328g0050 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.3e-07 59.3 69 46.4
Nitab4.5_0000457g0450 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.9e-07 58.9 72 47.2
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-07 58.9 63 50.8
Nitab4.5_0001980g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.5e-06 56.6 61 45.9
Nitab4.5_0000386g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-06 56.2 82 40.2
Nitab4.5_0004728g0120 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.9e-06 56.2 63 46.0
Nitab4.5_0007450g0030 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.5e-06 55.8 71 40.8
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 3.3e-06 55.5 51 39.2
PGSC0003DMG400003817 Solanum tuberosum HOM05D000024 ORTHO05D000006 9.5e-06 53.9 40 62.5


User provided reference genes

Program Settings