Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007940g0050 Nicotiana tabacum HOM05D006133 ORTHO05D007855 3.1e-97 358.6 200 100.0
Nitab4.5_0003432g0010 Nicotiana tabacum HOM05D006133 ORTHO05D007855 4.6e-93 344.7 200 97.0
Peaxi162Scf00736g00427 Petunia axillaris HOM05D006133 ORTHO05D007855 3.3e-75 285.4 224 78.1
Sopen02g023140 Solanum pennellii HOM05D006133 ORTHO05D007855 8.5e-71 270.8 213 77.0
PGSC0003DMG400029689 Solanum tuberosum HOM05D006133 ORTHO05D007855 4.2e-70 268.5 214 76.2
CAN.G1164.26 Capsicum annuum HOM05D006133 ORTHO05D007855 1.2e-69 266.9 213 76.5
Cc02_g13300 Coffea canephora HOM05D006133 ORTHO05D007855 1.0e-60 237.3 212 66.0
Actinidia05630 Actinidia chinensis HOM05D006133 ORTHO05D007855 5.3e-57 224.9 213 64.3
Lj1A1206T67 Lonicera japonica HOM05D006133 ORTHO05D007855 7.0e-57 224.6 213 63.8
Dinv40551 Davidia involucrata HOM05D006133 ORTHO05D007855 3.5e-56 222.2 213 64.3
Solyc02g078290.4 Solanum lycopersicum HOM05D006133 ORTHO05D007855 3.5e-56 222.2 158 81.6
Migut.M01145 Erythranthe guttata HOM05D006133 ORTHO05D007855 5.9e-56 221.5 213 62.9
Manes.16G026900 Manihot esculenta HOM05D006133 ORTHO05D007855 5.9e-56 221.5 213 64.8
Oeu057904.1 Olea europaea HOM05D006133 ORTHO05D007855 5.9e-56 221.5 213 63.4
Hma1.2p1_0785F.1_g217580 Hydrangea macrophylla HOM05D006133 ORTHO05D007855 7.7e-56 221.1 221 62.0
TWI38G1277 Tripterygium wilfordii HOM05D006133 ORTHO05D007855 1.0e-55 220.7 200 66.5
CiPaw.09G059200 Carya illinoinensis HOM05D006133 ORTHO05D007855 2.2e-55 219.5 214 64.0
CSS0047692 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 1.1e-54 217.2 213 62.4
Potri.004G042800 Populus trichocarpa HOM05D006133 ORTHO05D007855 4.2e-54 215.3 213 62.9
Atru.chr10.1894 Acer truncatum HOM05D006133 ORTHO05D007855 7.2e-54 214.5 213 61.0
CSS0042278 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 9.4e-54 214.2 209 64.1
Thecc.06G188500 Theobroma cacao HOM05D006133 ORTHO05D007855 1.6e-53 213.4 213 60.6
COL.COLO4_31481 Corchorus olitorius HOM05D006133 ORTHO05D007855 2.1e-53 213.0 211 60.7
Haze_06477 Corylus avellana HOM05D006133 ORTHO05D007855 1.8e-52 209.9 214 61.2
ECA234G2723 Erigeron canadensis HOM05D006133 ORTHO05D007855 1.8e-52 209.9 196 61.2
QL05p040164 Quercus lobata HOM05D006133 ORTHO05D007855 4.0e-52 208.8 211 60.7
Hund23731 Selenicereus undatus HOM05D006133 ORTHO05D007855 3.4e-51 205.7 213 60.1
Solyc02g078280.3 Solanum lycopersicum HOM05D006133 ORTHO05D007855 5.7e-51 204.9 170 74.1
arahy.Tifrunner.gnm1.ann1.Y5A5WX Arachis hypogaea HOM05D006133 ORTHO05D007855 1.3e-50 203.8 212 57.5
Gorai.011G027600 Gossypium raimondii HOM05D006133 ORTHO05D007855 1.7e-50 203.4 213 59.2
Hund23730 Selenicereus undatus HOM05D006133 ORTHO05D007855 1.7e-50 203.4 213 59.6
arahy.Tifrunner.gnm1.ann1.YAJ938 Arachis hypogaea HOM05D006133 ORTHO05D007855 2.2e-50 203.0 224 56.2
Cfa000437 Carpinus fangiana HOM05D006133 ORTHO05D007855 2.8e-50 202.6 214 60.3
Gohir.A10G025600 Gossypium hirsutum HOM05D006133 ORTHO05D007855 1.1e-49 200.7 213 58.2
Glyma.13G179800 Glycine max HOM05D006133 ORTHO05D007855 1.4e-49 200.3 215 59.1
Cc01_g03530 Coffea canephora HOM05D006133 ORTHO05D007855 2.4e-49 199.5 169 68.6
AUR62017011 Chenopodium quinoa HOM05D006133 ORTHO05D007855 3.1e-49 199.1 214 57.9
Glyma.07G196100 Glycine max HOM05D006133 ORTHO05D007855 3.1e-49 199.1 215 59.5
HanXRQChr16g0517711 Helianthus annuus HOM05D006133 ORTHO05D007855 3.1e-49 199.1 236 54.2
MBI09_g12165_MAGBIO Magnolia biondii HOM05D006133 ORTHO05D007855 4.1e-49 198.7 212 56.1
Sc05g0007700 Simmondsia chinensis HOM05D006133 ORTHO05D007855 4.1e-49 198.7 213 58.7
Lj4g0021405 Lotus japonicus HOM05D006133 ORTHO05D007855 5.4e-49 198.4 217 58.5
Potri.011G051900 Populus trichocarpa HOM05D006133 ORTHO05D007855 7.0e-49 198.0 213 59.2
Lsat_1_v5_gn_4_52940 Lactuca sativa HOM05D006133 ORTHO05D007855 1.6e-48 196.8 236 53.4
Prupe.4G046300 Prunus persica HOM05D006133 ORTHO05D007855 4.5e-48 195.3 213 58.2
AUR62014816 Chenopodium quinoa HOM05D006133 ORTHO05D007855 5.9e-48 194.9 214 57.0
MELO3C002599.2 Cucumis melo HOM05D006133 ORTHO05D007855 1.7e-47 193.4 177 62.1
Cpa.g.sc27.45 Carica papaya HOM05D006133 ORTHO05D007855 2.3e-47 193.0 209 56.9
ClCG03G006010 Citrullus lanatus HOM05D006133 ORTHO05D007855 2.3e-47 193.0 209 56.0
TAR628G0719 Trochodendron aralioides HOM05D006133 ORTHO05D007855 5.0e-47 191.8 213 57.3
Carub.0004s1546 Capsella rubella HOM05D006133 ORTHO05D007855 6.5e-47 191.4 215 54.4
CsaV3_1G012270 Cucumis sativus L. HOM05D006133 ORTHO05D007855 6.5e-47 191.4 210 55.7
THA.LOC104814218 Tarenaya hassleriana HOM05D006133 ORTHO05D007855 6.5e-47 191.4 211 56.4
VMungo0251G0712 Vigna mungo HOM05D006133 ORTHO05D007855 6.5e-47 191.4 215 56.7
Phvul.002G234200 Phaseolus vulgaris HOM05D006133 ORTHO05D007855 8.6e-47 191.0 217 56.2
Medtr4g088855 Medicago truncatula HOM05D006133 ORTHO05D007855 4.2e-46 188.7 213 56.3
RcHm_v2.0_Chr5g0008281 Rosa chinensis HOM05D006133 ORTHO05D007855 2.1e-45 186.4 209 57.9
FvH4_3g09320 Fragaria vesca HOM05D006133 ORTHO05D007855 3.6e-45 185.7 214 56.5
AL4G29540 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 6.1e-45 184.9 215 54.9
TPR.G12027 Trifolium pratense HOM05D006133 ORTHO05D007855 8.0e-45 184.5 213 55.4
unitig_22.g6229 Utricularia gibba HOM05D006133 ORTHO05D007855 1.8e-44 183.3 173 61.8
Ah.09g237330 Amaranthus hybridus HOM05D006133 ORTHO05D007855 5.2e-44 181.8 226 51.3
BcaC02g07769 Brassica carinata HOM05D006133 ORTHO05D007855 8.9e-44 181.0 212 51.9
Nn1g08778 Nelumbo nucifera HOM05D006133 ORTHO05D007855 8.9e-44 181.0 201 54.7
PSO478G5317 Papaver somniferum HOM05D006133 ORTHO05D007855 1.2e-43 180.6 208 54.3
Duzib235G0895 Durio zibethinus HOM05D006133 ORTHO05D007855 1.5e-43 180.3 169 61.5
CARHR127900 Cardamine hirsuta HOM05D006133 ORTHO05D007855 2.6e-43 179.5 215 52.6
BolC4t27810H Brassica oleracea HOM05D006133 ORTHO05D007855 3.4e-43 179.1 213 51.6
PSO478G1675 Papaver somniferum HOM05D006133 ORTHO05D007855 7.5e-43 177.9 207 53.1
AT2G33793 Arabidopsis thaliana HOM05D006133 ORTHO05D007855 1.7e-42 176.8 215 53.0
FAN16G1924 Fragaria x ananassa HOM05D006133 ORTHO05D007855 8.3e-42 174.5 219 53.9
Thhalv10017234m.g Eutrema salsugineum HOM05D006133 ORTHO05D007855 1.8e-41 173.3 214 51.4
Ca_18541_v3 Cicer arietinum L. HOM05D006133 ORTHO05D007855 4.1e-41 172.2 174 60.3
Rhsim13G0177600 Rhododendron simsii HOM05D006133 ORTHO05D007855 1.7e-39 166.8 256 47.7
Dinv07556 Davidia involucrata HOM05D006133 ORTHO05D007855 6.6e-39 164.9 157 65.0
SGA_v2.0_scaffold22G09717 Striga asiatica HOM05D006133 ORTHO05D007855 8.6e-39 164.5 217 53.0
ATR0584G083 Amborella trichopoda HOM05D006133 ORTHO05D007855 2.1e-37 159.8 203 48.8
Sp4g16180 Schrenkiella parvula HOM05D006133 ORTHO05D007855 8.0e-37 157.9 215 49.8
Sabra11G0035700 Salix brachista HOM05D006133 ORTHO05D007855 1.8e-36 156.8 213 51.2
CANSAT35G1333 Cannabis sativa HOM05D006133 ORTHO05D007855 4.9e-34 148.7 174 54.6
BraA04t18104Z Brassica rapa HOM05D006133 ORTHO05D007855 1.1e-33 147.5 206 47.1
Ciclev10017918m.g Citrus clementina HOM05D006133 ORTHO05D007855 1.8e-33 146.7 145 62.1
MD05G1313300 Malus domestica HOM05D006133 ORTHO05D007855 1.8e-33 146.7 157 57.3
EL10Ac8g20377 Beta vulgaris HOM05D006133 ORTHO05D007855 7.0e-33 144.8 146 59.6
C04p15330 Brassica napus HOM05D006133 ORTHO05D007855 9.2e-33 144.4 150 60.7
Os03g0837800 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 1.6e-32 143.7 211 45.0
Psat7g113640 Pisum sativum HOM05D006133 ORTHO05D007855 3.5e-32 142.5 221 48.9
CDE04G1633 Ceratophyllum demersum HOM05D006133 ORTHO05D007855 6.0e-32 141.7 214 46.3
A04p26010 Brassica napus HOM05D006133 ORTHO05D007855 1.0e-31 141.0 216 44.4
Gohir.D10G026300 Gossypium hirsutum HOM05D006133 ORTHO05D007855 3.0e-31 139.4 179 52.0
BcaC02g11457 Brassica carinata HOM05D006133 ORTHO05D007855 3.9e-31 139.0 150 59.3
C04p63360 Brassica napus HOM05D006133 ORTHO05D007855 3.9e-31 139.0 183 47.5
BolC4t23106H Brassica oleracea HOM05D006133 ORTHO05D007855 8.6e-31 137.9 218 47.2
PGR004G1018 Punica granatum HOM05D006133 ORTHO05D007855 1.5e-30 137.1 215 47.0
FAN11G1298 Fragaria x ananassa HOM05D006133 ORTHO05D007855 3.3e-30 136.0 156 56.4
FAN21G1061 Fragaria x ananassa HOM05D006133 ORTHO05D007855 3.3e-30 136.0 144 59.0
Zm00001eb063880 Zea mays HOM05D006133 ORTHO05D007855 3.3e-30 136.0 213 41.3
FAN25G2154 Fragaria x ananassa HOM05D006133 ORTHO05D007855 1.6e-29 133.7 146 57.5
Cc01_g03500 Coffea canephora HOM05D006133 ORTHO05D007855 4.7e-29 132.1 216 46.8
SMO353G0258 Selaginella moellendorffii HOM05D006133 ORTHO05D007855 4.7e-29 132.1 180 42.8
GSVIVG01033625001 Vitis vinifera HOM05D006133 ORTHO05D007855 1.3e-26 124.0 169 49.7
Sed0025328 Sechium edule HOM05D006133 ORTHO05D007855 3.7e-26 122.5 169 47.9
AagrBONN_evm.TU.Sc2ySwM_228.202 Anthoceros agrestis HOM05D006133 ORTHO05D007855 4.1e-25 119.0 204 35.8
DCAR_028075 Daucus carota HOM05D006133 ORTHO05D007855 9.2e-25 117.9 218 44.5
Lalb_Chr05g0218461 Lupinus albus HOM05D006133 ORTHO05D007855 1.2e-24 117.5 213 43.2
Cpa.g.sc39.10 Carica papaya HOM05D006133 ORTHO05D007855 5.8e-19 98.6 133 47.4
SGA_v2.0_scaffold499G52489 Striga asiatica HOM05D006133 ORTHO05D007855 9.9e-19 97.8 189 41.8
Mapoly0103s0052 Marchantia polymorpha HOM05D006133 ORTHO05D007855 1.4e-17 94.0 208 32.7
Zm00001eb304600 Zea mays HOM05D006133 ORTHO05D007855 9.5e-14 81.3 148 35.1
HPP92_006840 Vanilla planifolia HOM05D006133 ORTHO05D007855 2.1e-13 80.1 106 50.0
BcaB02g10593 Brassica carinata HOM05D006133 ORTHO05D007855 8.1e-13 78.2 93 53.8
Gohir.A01G166500 Gossypium hirsutum HOM05D006133 ORTHO05D007855 4.0e-12 75.9 89 52.8
AL4G11580 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 6.8e-12 75.1 214 34.1
Os07g0256300 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 1.2e-11 74.3 191 32.5
Os07g0208801 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 1.1e-09 67.8 65 52.3
Prupe.4G042300 Prunus persica HOM05D006133 ORTHO05D007855 9.2e-09 64.7 64 60.9
C04p15300 Brassica napus HOM05D006133 ORTHO05D007855 6.0e-08 62.0 51 66.7
Gohir.A11G286823 Gossypium hirsutum HOM05D006133 ORTHO05D007855 1.0e-07 61.2 78 50.0
HPP92_006839 Vanilla planifolia HOM05D006133 ORTHO05D007855 2.5e-06 56.6 53 58.5


User provided reference genes

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