Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007940g0020 Nicotiana tabacum HOM05D001705 ORTHO05D008928 1.0e-63 246.5 122 100.0
Nitab4.5_0003432g0050 Nicotiana tabacum HOM05D001705 ORTHO05D008928 1.5e-54 216.1 114 93.0
PGSC0003DMG400010036 Solanum tuberosum HOM05D001705 ORTHO05D008928 6.6e-50 200.7 104 94.2
CAN.G836.15 Capsicum annuum HOM05D001705 ORTHO05D008928 7.3e-49 197.2 110 88.2
Peaxi162Scf00078g00076 Petunia axillaris HOM05D001705 ORTHO05D008928 5.4e-44 181.0 106 83.0
Sopen02g034700 Solanum pennellii HOM05D001705 ORTHO05D008928 3.5e-43 178.3 89 95.5
Dinv22114 Davidia involucrata HOM05D001705 ORTHO05D008928 2.5e-33 145.6 106 65.1
Dinv37409 Davidia involucrata HOM05D001705 ORTHO05D008928 2.5e-33 145.6 109 64.2
Rhsim12G0002800 Rhododendron simsii HOM05D001705 ORTHO05D008928 5.6e-33 144.4 108 65.7
Actinidia29374 Actinidia chinensis HOM05D001705 ORTHO05D008928 1.6e-32 142.9 107 63.6
TAR628G0577 Trochodendron aralioides HOM05D001705 ORTHO05D008928 2.8e-32 142.1 106 63.2
GSVIVG01036284001 Vitis vinifera HOM05D001705 ORTHO05D008928 6.2e-32 141.0 107 64.5
Prupe.8G006600 Prunus persica HOM05D001705 ORTHO05D008928 8.1e-32 140.6 106 64.2
RcHm_v2.0_Chr6g0251131 Rosa chinensis HOM05D001705 ORTHO05D008928 8.1e-32 140.6 106 66.0
QL07p047839 Quercus lobata HOM05D001705 ORTHO05D008928 1.4e-31 139.8 105 62.9
FAN24G2035 Fragaria x ananassa HOM05D001705 ORTHO05D008928 1.8e-31 139.4 107 65.4
vmacro00942 Vaccinium macrocarpon HOM05D001705 ORTHO05D008928 3.1e-31 138.7 107 63.6
TAR376G0455 Trochodendron aralioides HOM05D001705 ORTHO05D008928 5.2e-31 137.9 106 64.2
FvH4_2g00750 Fragaria vesca HOM05D001705 ORTHO05D008928 6.8e-31 137.5 106 65.1
FAN27G0168 Fragaria x ananassa HOM05D001705 ORTHO05D008928 6.8e-31 137.5 106 65.1
QL07p031108 Quercus lobata HOM05D001705 ORTHO05D008928 6.8e-31 137.5 105 61.9
Haze_13961 Corylus avellana HOM05D001705 ORTHO05D008953 8.9e-31 137.1 104 60.6
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.5e-30 136.3 108 62.0
Cfa008073 Carpinus fangiana HOM05D001705 ORTHO05D008928 2.0e-30 136.0 103 62.1
Hma1.2p1_0238F.1_g099670 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 2.0e-30 136.0 96 67.7
Lj3g0021440 Lotus japonicus HOM05D001705 ORTHO05D008928 2.6e-30 135.6 104 62.5
Hma1.2p1_2213F.1_g317220 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 3.4e-30 135.2 101 64.4
Ciclev10022992m.g Citrus clementina HOM05D001705 ORTHO05D008928 4.4e-30 134.8 106 60.4
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 5.8e-30 134.4 108 61.1
HanXRQChr01g0026311 Helianthus annuus HOM05D001705 ORTHO05D008928 7.6e-30 134.0 100 64.0
CiPaw.03G013900 Carya illinoinensis HOM05D001705 ORTHO05D008928 1.3e-29 133.3 106 59.4
DCAR_003512 Daucus carota HOM05D001705 ORTHO05D008928 1.3e-29 133.3 106 63.2
Potri.019G070801 Populus trichocarpa HOM05D001705 ORTHO05D008928 2.2e-29 132.5 104 62.5
Sabra19G0082700 Salix brachista HOM05D001705 ORTHO05D008928 2.9e-29 132.1 106 60.4
Medtr3g008540 Medicago truncatula HOM05D001705 ORTHO05D008928 3.8e-29 131.7 104 62.5
VMungo1080G1609 Vigna mungo HOM05D001705 ORTHO05D008928 3.8e-29 131.7 95 68.4
Glyma.06G321300 Glycine max HOM05D001705 ORTHO05D008928 4.9e-29 131.3 100 67.0
Phvul.L001622 Phaseolus vulgaris HOM05D001705 ORTHO05D008928 4.9e-29 131.3 104 62.5
Atru.chr3.1320 Acer truncatum HOM05D001705 ORTHO05D008928 8.4e-29 130.6 106 59.4
Solyc02g090010.3 Solanum lycopersicum HOM05D001705 ORTHO05D008928 8.4e-29 130.6 63 98.4
MD05G1003200 Malus domestica HOM05D001705 ORTHO05D008928 1.9e-28 129.4 106 60.4
Psat5g227400 Pisum sativum HOM05D001705 ORTHO05D008928 1.9e-28 129.4 98 65.3
Migut.C01384 Erythranthe guttata HOM05D001705 ORTHO05D008928 3.2e-28 128.6 87 72.4
Lalb_Chr15g0079721 Lupinus albus HOM05D001705 ORTHO05D008928 4.2e-28 128.3 93 67.7
MSTRG.5080 Avicennia marina HOM05D001705 ORTHO05D008928 7.1e-28 127.5 100 66.0
AUR62025342 Chenopodium quinoa HOM05D001705 ORTHO05D008928 7.1e-28 127.5 93 64.5
EL10Ac8g18938 Beta vulgaris HOM05D001705 ORTHO05D008928 1.2e-27 126.7 104 59.6
MD10G1004200 Malus domestica HOM05D001705 ORTHO05D008928 1.2e-27 126.7 106 59.4
Nn6g34378 Nelumbo nucifera HOM05D001705 ORTHO05D008928 1.2e-27 126.7 100 61.0
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 1.6e-27 126.3 84 67.9
CiPaw.10G112700 Carya illinoinensis HOM05D001705 ORTHO05D008928 2.7e-27 125.6 106 57.5
Manes.03G079500 Manihot esculenta HOM05D001705 ORTHO05D008928 2.7e-27 125.6 83 67.5
Ah.13g075530 Amaranthus hybridus HOM05D001705 ORTHO05D008928 3.5e-27 125.2 90 66.7
PGR044G0661 Punica granatum HOM05D001705 ORTHO05D008928 3.5e-27 125.2 92 66.3
SalBow7G0612 Salvia bowleyana HOM05D001705 ORTHO05D008928 7.8e-27 124.0 87 71.3
CANSAT21G1408 Cannabis sativa HOM05D001705 ORTHO05D008928 1.0e-26 123.6 105 58.1
CANSAT21G2117 Cannabis sativa HOM05D001705 ORTHO05D008928 1.0e-26 123.6 105 58.1
AUR62028345 Chenopodium quinoa HOM05D001705 ORTHO05D008928 1.0e-26 123.6 87 66.7
arahy.Tifrunner.gnm1.ann1.X4BGNP Arachis hypogaea HOM05D001705 ORTHO05D008928 1.3e-26 123.2 90 66.7
MELO3C022174.2 Cucumis melo HOM05D001705 ORTHO05D008928 1.3e-26 123.2 82 69.5
Duzib106G1039 Durio zibethinus HOM05D001705 ORTHO05D008928 1.3e-26 123.2 86 66.3
Sed0017068 Sechium edule HOM05D001705 ORTHO05D008928 1.3e-26 123.2 82 72.0
COL.COLO4_25141 Corchorus olitorius HOM05D001705 ORTHO05D008928 2.3e-26 122.5 84 66.7
TWI81G0898 Tripterygium wilfordii HOM05D001705 ORTHO05D008928 2.3e-26 122.5 86 66.3
Cpa.g.sc21.88 Carica papaya HOM05D001705 ORTHO05D008928 3.0e-26 122.1 105 57.1
CsaV3_5G039950 Cucumis sativus L. HOM05D001705 ORTHO05D008928 3.0e-26 122.1 82 69.5
Eucgr.F02944 Eucalyptus grandis HOM05D001705 ORTHO05D008928 3.0e-26 122.1 106 54.7
Lj3g0024983 Lotus japonicus HOM05D001705 ORTHO05D008928 3.0e-26 122.1 89 66.3
Aqoxy1G00582 Aquilegia oxysepala HOM05D001705 ORTHO05D008928 3.9e-26 121.7 89 64.0
ClCG08G000770 Citrullus lanatus HOM05D001705 ORTHO05D008928 3.9e-26 121.7 82 69.5
ECA248G1877 Erigeron canadensis HOM05D001705 ORTHO05D008928 3.9e-26 121.7 104 57.7
Gohir.A06G168000 Gossypium hirsutum HOM05D001705 ORTHO05D008928 8.7e-26 120.6 87 66.7
Gohir.D06G175400 Gossypium hirsutum HOM05D001705 ORTHO05D008928 8.7e-26 120.6 82 67.1
Gorai.010G205800 Gossypium raimondii HOM05D001705 ORTHO05D008928 8.7e-26 120.6 82 67.1
Lsat_1_v5_gn_1_56320 Lactuca sativa HOM05D001705 ORTHO05D008928 2.5e-25 119.0 109 51.4
MBI06_g14319_MAGBIO Magnolia biondii HOM05D001705 ORTHO05D008928 3.3e-25 118.6 86 65.1
Os02g0558300 Oryza sativa ssp. japonica HOM05D001705 ORTHO05D008928 4.3e-25 118.2 77 74.0
Sc18g0002990 Simmondsia chinensis HOM05D001705 ORTHO05D008928 5.6e-25 117.9 87 64.4
unitig_8.g4896 Utricularia gibba HOM05D001705 ORTHO05D008928 1.6e-24 116.3 86 64.0
Zm00001eb182270 Zea mays HOM05D001705 ORTHO05D008928 4.8e-24 114.8 80 67.5
CDE11G0405 Ceratophyllum demersum HOM05D001705 ORTHO05D008928 6.2e-24 114.4 104 53.8
THA.LOC104815816 Tarenaya hassleriana HOM05D001705 ORTHO05D008928 6.2e-24 114.4 98 55.1
Zm00001eb244080 Zea mays HOM05D001705 ORTHO05D008928 1.1e-23 113.6 80 66.2
PSO339G0564 Papaver somniferum HOM05D001705 ORTHO05D008928 4.0e-23 111.7 91 61.5
Aa31LG9G11900 Aethionema arabicum HOM05D001705 ORTHO05D008928 6.9e-23 110.9 104 50.0
ATR0757G218 Amborella trichopoda HOM05D001705 ORTHO05D008928 2.6e-22 109.0 102 52.9
SEGI_06051 Sequoiadendron giganteum HOM05D001705 ORTHO05D008928 2.6e-22 109.0 107 49.5
VMungo0464G0569 Vigna mungo HOM05D001705 ORTHO05D008928 3.4e-22 108.6 91 59.3
Thhalv10029346m.g Eutrema salsugineum HOM05D001705 ORTHO05D008928 5.8e-22 107.8 115 47.0
A09p28840 Brassica napus HOM05D001705 ORTHO05D008928 9.9e-22 107.1 109 49.5
C09p36640 Brassica napus HOM05D001705 ORTHO05D008928 9.9e-22 107.1 109 49.5
BolC9t56496H Brassica oleracea HOM05D001705 ORTHO05D008928 9.9e-22 107.1 109 49.5
BraA09t38446Z Brassica rapa HOM05D001705 ORTHO05D008928 9.9e-22 107.1 109 49.5
Sp6g07460 Schrenkiella parvula HOM05D001705 ORTHO05D008928 1.3e-21 106.7 106 50.0
BcaB01g01450 Brassica carinata HOM05D001705 ORTHO05D008928 1.7e-21 106.3 109 50.5
BcaB04g18852 Brassica carinata HOM05D001705 ORTHO05D008928 3.8e-21 105.1 86 54.7
BcaB05g23921 Brassica carinata HOM05D001705 ORTHO05D008928 4.9e-21 104.8 87 54.0
BcaC04g21016 Brassica carinata HOM05D001705 ORTHO05D008928 4.9e-21 104.8 87 54.0
CARHR261140 Cardamine hirsuta HOM05D001705 ORTHO05D008928 4.9e-21 104.8 103 48.5
AT4G10100 Arabidopsis thaliana HOM05D001705 ORTHO05D008928 6.4e-21 104.4 103 49.5
HPP92_013556 Vanilla planifolia HOM05D001705 ORTHO05D008928 6.4e-21 104.4 82 57.3
AL6G43910 Arabidopsis lyrata HOM05D001705 ORTHO05D008928 5.4e-20 101.3 95 49.5
Carub.0006s2867 Capsella rubella HOM05D001705 ORTHO05D008928 5.4e-20 101.3 103 49.5
SMO178G0001 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 4.6e-19 98.2 88 50.0
SMO119G0349 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 1.0e-18 97.1 88 48.9
ATR1089G014 Amborella trichopoda HOM05D001705 ORTHO05D008928 1.3e-18 96.7 83 55.4
Pp3c24_14090 Physcomitrium patens HOM05D001705 ORTHO05D008928 3.3e-17 92.0 81 49.4
Mapoly0053s0105 Marchantia polymorpha HOM05D001705 ORTHO05D008928 4.8e-16 88.2 106 43.4
SHI16716 Sapria himalayana HOM05D001705 ORTHO05D008928 7.6e-14 80.9 87 42.5
Cre08.g382545 Chlamydomonas reinhardtii HOM05D001705 ORTHO05D008928 1.6e-11 73.2 84 39.3
BolC2t10291H Brassica oleracea HOM05D001705 ORTHO05D008928 6.7e-10 67.8 73 41.1
CBR_g41370 Chara braunii HOM05D001705 ORTHO05D008928 8.7e-10 67.4 82 36.6
CBR_g5690 Chara braunii HOM05D001705 ORTHO05D008928 2.1e-08 62.8 80 38.8
MCO06G125 Micromonas commoda HOM05D001705 ORTHO05D008928 2.1e-08 62.8 84 40.5
PRCOL_00000441 Prasinoderma coloniale HOM05D000415 ORTHO05D002017 4.5e-06 55.1 94 38.3


User provided reference genes

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