Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007906g0070 Nicotiana tabacum HOM05D005438 ORTHO05D006744 1.6e-203 712.6 367 100.0
Nitab4.5_0003015g0090 Nicotiana tabacum HOM05D005438 ORTHO05D006744 5.4e-188 661.0 368 93.8
PGSC0003DMG400012320 Solanum tuberosum HOM05D005438 ORTHO05D006744 9.8e-182 640.2 363 91.5
CAN.G532.38 Capsicum annuum HOM05D005438 ORTHO05D006744 5.4e-180 634.4 363 91.2
Solyc08g081580.4 Solanum lycopersicum HOM05D005438 ORTHO05D006744 2.5e-177 625.5 363 90.6
Sopen08g029890 Solanum pennellii HOM05D005438 ORTHO05D006744 8.9e-175 617.1 363 89.0
Peaxi162Scf00074g01737 Petunia axillaris HOM05D005438 ORTHO05D006744 4.1e-172 608.2 366 87.2
Gohir.D03G078500 Gossypium hirsutum HOM05D005438 ORTHO05D006744 5.6e-121 438.3 374 65.5
GSVIVG01019417001 Vitis vinifera HOM05D005438 ORTHO05D006744 2.8e-120 436.0 370 63.5
COL.COLO4_08362 Corchorus olitorius HOM05D005438 ORTHO05D006744 6.2e-120 434.9 368 64.7
Gohir.A02G105300 Gossypium hirsutum HOM05D005438 ORTHO05D006744 2.4e-119 433.0 369 65.6
Dinv37597 Davidia involucrata HOM05D005438 ORTHO05D006744 4.0e-119 432.2 372 64.5
Thecc.03G286500 Theobroma cacao HOM05D005438 ORTHO05D006744 1.5e-118 430.3 369 64.5
Gorai.003G085600 Gossypium raimondii HOM05D005438 ORTHO05D006744 2.0e-118 429.9 375 65.1
Actinidia10609 Actinidia chinensis HOM05D005438 ORTHO05D006744 1.7e-117 426.8 377 63.1
Rhsim02G0235700 Rhododendron simsii HOM05D005438 ORTHO05D006744 2.2e-117 426.4 378 63.0
Duzib084G0802 Durio zibethinus HOM05D005438 ORTHO05D006744 4.2e-116 422.2 374 61.8
arahy.Tifrunner.gnm1.ann1.Y7QUAU Arachis hypogaea HOM05D005438 ORTHO05D006744 1.2e-115 420.6 364 62.4
TAR374G1319 Trochodendron aralioides HOM05D005438 ORTHO05D006744 2.7e-115 419.5 370 62.2
Phvul.002G293100 Phaseolus vulgaris HOM05D005438 ORTHO05D006744 7.9e-115 417.9 369 60.7
arahy.Tifrunner.gnm1.ann1.I29YTG Arachis hypogaea HOM05D005438 ORTHO05D006744 8.7e-114 414.5 366 61.7
Cc08_g15250 Coffea canephora HOM05D005438 ORTHO05D006744 1.1e-113 414.1 378 61.6
CiPaw.11G129800 Carya illinoinensis HOM05D005438 ORTHO05D006744 4.3e-113 412.1 368 59.8
RcHm_v2.0_Chr7g0196591 Rosa chinensis HOM05D005438 ORTHO05D006744 5.7e-113 411.8 374 61.2
FAN08G1515 Fragaria x ananassa HOM05D005438 ORTHO05D006744 2.1e-112 409.8 376 61.2
QL12p031793 Quercus lobata HOM05D005438 ORTHO05D006744 2.8e-112 409.5 408 56.6
VMungo0251G0328 Vigna mungo HOM05D005438 ORTHO05D006744 2.8e-112 409.5 370 60.8
Atru.chr9.2115 Acer truncatum HOM05D005438 ORTHO05D006744 6.3e-112 408.3 374 60.4
CSS0046697 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 6.3e-112 408.3 371 60.9
CsaV3_5G002390 Cucumis sativus L. HOM05D005438 ORTHO05D006744 6.3e-112 408.3 377 58.6
DCAR_004611 Daucus carota HOM05D005438 ORTHO05D006744 1.8e-111 406.8 369 60.2
FAN18G2027 Fragaria x ananassa HOM05D005438 ORTHO05D006744 1.8e-111 406.8 374 61.5
Prupe.5G106500 Prunus persica HOM05D005438 ORTHO05D006744 1.8e-111 406.8 371 60.1
FvH4_5g03190 Fragaria vesca HOM05D005438 ORTHO05D006744 2.4e-111 406.4 374 61.5
MD14G1111900 Malus domestica HOM05D005438 ORTHO05D006744 4.1e-111 405.6 369 59.9
FAN04G0810 Fragaria x ananassa HOM05D005438 ORTHO05D006744 6.9e-111 404.8 377 61.0
FAN13G0364 Fragaria x ananassa HOM05D005438 ORTHO05D006744 6.9e-111 404.8 374 61.0
Eucgr.L02379 Eucalyptus grandis HOM05D005438 ORTHO05D006744 1.2e-110 404.1 368 61.1
vmacro11410 Vaccinium macrocarpon HOM05D005438 ORTHO05D006744 1.2e-110 404.1 372 61.6
MELO3C005715.2 Cucumis melo HOM05D005438 ORTHO05D006744 1.5e-110 403.7 374 58.3
Migut.J01399 Erythranthe guttata HOM05D005438 ORTHO05D006744 2.0e-110 403.3 364 61.8
Eucgr.D01812 Eucalyptus grandis HOM05D005438 ORTHO05D006744 2.0e-110 403.3 368 61.1
Duzib205G0010 Durio zibethinus HOM05D005438 ORTHO05D006744 3.4e-110 402.5 368 61.1
Ca_10950_v3 Cicer arietinum L. HOM05D005438 ORTHO05D006744 1.0e-109 401.0 371 60.4
Gorai.008G250200 Gossypium raimondii HOM05D005438 ORTHO05D006744 1.7e-109 400.2 374 61.0
Gohir.D12G233900 Gossypium hirsutum HOM05D005438 ORTHO05D006744 2.2e-109 399.8 379 60.2
Lj4g0011941 Lotus japonicus HOM05D005438 ORTHO05D006744 2.2e-109 399.8 376 60.4
Nn1g01673 Nelumbo nucifera HOM05D005438 ORTHO05D006744 2.2e-109 399.8 396 57.8
Glyma.05G211800 Glycine max HOM05D005438 ORTHO05D006744 3.8e-109 399.1 370 60.5
Lalb_Chr05g0224491 Lupinus albus HOM05D005438 ORTHO05D006744 5.0e-109 398.7 376 60.6
Glyma.08G018100 Glycine max HOM05D005438 ORTHO05D006744 1.1e-108 397.5 369 60.7
Ciclev10020644m.g Citrus clementina HOM05D005438 ORTHO05D006744 1.4e-108 397.1 374 59.1
HanXRQChr02g0049721 Helianthus annuus HOM05D005438 ORTHO05D006744 1.4e-108 397.1 370 60.0
CANSAT21G0041 Cannabis sativa HOM05D005438 ORTHO05D006744 2.5e-108 396.4 375 59.7
ECA233G5263 Erigeron canadensis HOM05D005438 ORTHO05D006744 2.5e-108 396.4 376 59.0
TWI60G1446 Tripterygium wilfordii HOM05D005438 ORTHO05D006744 2.5e-108 396.4 376 59.8
Manes.01G057900 Manihot esculenta HOM05D005438 ORTHO05D006744 3.2e-108 396.0 407 57.5
Psat7g029680 Pisum sativum HOM05D005438 ORTHO05D006744 3.6e-107 392.5 369 59.6
Sed0027839 Sechium edule HOM05D005438 ORTHO05D006744 7.9e-107 391.3 376 59.0
Medtr8g098940 Medicago truncatula HOM05D005438 ORTHO05D006744 2.5e-105 386.3 376 59.8
Hund11433 Selenicereus undatus HOM05D005438 ORTHO05D006744 4.3e-105 385.6 380 59.5
Atru.BG.199.p Acer truncatum HOM05D005438 ORTHO05D006744 4.8e-104 382.1 368 57.6
Lsat_1_v5_gn_3_8761 Lactuca sativa HOM05D005438 ORTHO05D006744 1.4e-103 380.6 365 58.6
PGR031G2565 Punica granatum HOM05D005438 ORTHO05D006744 1.4e-103 380.6 368 57.3
SGA_v2.0_scaffold173G39139 Striga asiatica HOM05D005438 ORTHO05D006744 1.8e-103 380.2 394 56.1
Lj2C178T12 Lonicera japonica HOM05D005438 ORTHO05D006744 3.1e-103 379.4 377 58.1
ClCG01G002320 Citrullus lanatus HOM05D005438 ORTHO05D006744 1.2e-102 377.5 366 57.4
Migut.A00720 Erythranthe guttata HOM05D005438 ORTHO05D006744 4.5e-102 375.6 372 58.6
AUR62019752 Chenopodium quinoa HOM05D005438 ORTHO05D006744 7.7e-102 374.8 370 57.3
MBI11_g09068_MAGBIO Magnolia biondii HOM05D005438 ORTHO05D006744 2.2e-101 373.2 355 58.6
TPR.G12953 Trifolium pratense HOM05D005438 ORTHO05D006744 8.5e-101 371.3 367 58.6
Ah.12g051920 Amaranthus hybridus HOM05D005438 ORTHO05D006744 1.9e-100 370.2 381 55.9
Potri.003G132600 Populus trichocarpa HOM05D005438 ORTHO05D006744 9.4e-100 367.9 410 51.2
Aqoxy7G00195 Aquilegia oxysepala HOM05D005438 ORTHO05D006744 2.7e-99 366.3 378 55.6
Aa31LG2G1070 Aethionema arabicum HOM05D005438 ORTHO05D006744 7.9e-99 364.8 389 55.5
AUR62010754 Chenopodium quinoa HOM05D005438 ORTHO05D006744 1.4e-98 364.0 375 56.0
Sabra03G0095000 Salix brachista HOM05D005438 ORTHO05D006744 1.4e-98 364.0 409 51.1
THA.LOC104817794 Tarenaya hassleriana HOM05D005438 ORTHO05D006744 1.4e-98 364.0 383 55.6
Gohir.A12G233400 Gossypium hirsutum HOM05D005438 ORTHO05D006744 4.4e-97 359.0 374 58.0
CSS0015982 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 3.7e-96 355.9 367 58.3
BcaB07g31422 Brassica carinata HOM05D005438 ORTHO05D006744 4.8e-96 355.5 403 52.9
BcaB07g31532 Brassica carinata HOM05D005438 ORTHO05D006744 8.2e-96 354.8 408 52.9
AL2G11130 Arabidopsis lyrata HOM05D005438 ORTHO05D006744 1.1e-95 354.4 396 53.5
EL10Ac5g12834 Beta vulgaris HOM05D005438 ORTHO05D006744 3.1e-95 352.8 351 56.7
A09p14060 Brassica napus HOM05D005438 ORTHO05D006744 3.4e-94 349.4 398 53.5
AT1G63980 Arabidopsis thaliana HOM05D005438 ORTHO05D006744 7.7e-94 348.2 399 52.4
Thhalv10023525m.g Eutrema salsugineum HOM05D005438 ORTHO05D006744 1.0e-93 347.8 394 53.8
Carub.0002s0086 Capsella rubella HOM05D005438 ORTHO05D006744 1.3e-93 347.4 394 52.5
BcaC04g22661 Brassica carinata HOM05D005438 ORTHO05D006744 2.5e-92 343.2 405 52.1
Zm00001eb001860 Zea mays HOM05D005438 ORTHO05D006744 3.2e-92 342.8 390 52.3
PSO478G3903 Papaver somniferum HOM05D005438 ORTHO05D006744 2.1e-91 340.1 390 51.5
BraA09t37053Z Brassica rapa HOM05D005438 ORTHO05D006744 7.9e-91 338.2 405 52.6
MD06G1091000 Malus domestica HOM05D005438 ORTHO05D006744 1.4e-90 337.4 363 53.2
C09p18360 Brassica napus HOM05D005438 ORTHO05D006744 2.3e-90 336.7 412 51.5
CARHR047000 Cardamine hirsuta HOM05D005438 ORTHO05D006744 3.0e-90 336.3 396 51.5
A09p15160 Brassica napus HOM05D005438 ORTHO05D006744 5.2e-90 335.5 411 51.3
PSO017G3503 Papaver somniferum HOM05D005438 ORTHO05D006744 5.2e-90 335.5 392 50.8
PSO266G0069 Papaver somniferum HOM05D005438 ORTHO05D006744 8.8e-90 334.7 389 51.4
Sp2g00710 Schrenkiella parvula HOM05D005438 ORTHO05D006744 8.8e-90 334.7 413 49.9
Os03g0125300 Oryza sativa ssp. japonica HOM05D005438 ORTHO05D006744 1.5e-89 334.0 388 52.3
ATR0661G541 Amborella trichopoda HOM05D005438 ORTHO05D006744 2.0e-89 333.6 397 50.4
BolC9t54592H Brassica oleracea HOM05D005438 ORTHO05D006744 1.3e-88 330.9 409 51.6
BraA09t37158Z Brassica rapa HOM05D005438 ORTHO05D006744 1.3e-88 330.9 415 50.8
C09p16950 Brassica napus HOM05D005438 ORTHO05D006744 1.7e-88 330.5 407 51.8
BolC9t54729H Brassica oleracea HOM05D005438 ORTHO05D006744 3.7e-88 329.3 414 50.5
Sc01g0009850 Simmondsia chinensis HOM05D005438 ORTHO05D006744 1.8e-87 327.0 309 58.6
HanXRQChr17g0533211 Helianthus annuus HOM05D005438 ORTHO05D006744 2.2e-85 320.1 357 54.3
unitig_32.g10979 Utricularia gibba HOM05D005438 ORTHO05D006744 5.7e-81 305.4 329 54.4
CDE04G0809 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 3.7e-80 302.8 366 51.1
HPP92_021018 Vanilla planifolia HOM05D005438 ORTHO05D006744 5.3e-79 298.9 373 50.9
SEGI_20773 Sequoiadendron giganteum HOM05D005438 ORTHO05D006744 1.4e-74 284.3 432 43.3
Haze_08758 Corylus avellana HOM05D005438 ORTHO05D006744 2.9e-69 266.5 278 55.8
SMO134G0098 Selaginella moellendorffii HOM05D005438 ORTHO05D006744 1.9e-52 210.7 365 38.9
Mapoly0090s0083 Marchantia polymorpha HOM05D005438 ORTHO05D006744 3.1e-50 203.4 480 33.8
Pp3c2_28530 Physcomitrium patens HOM05D005438 ORTHO05D006744 1.3e-48 198.0 406 36.5
SHI31900 Sapria himalayana HOM05D005438 ORTHO05D006744 3.7e-48 196.4 297 44.8
BcaC04g22519 Brassica carinata HOM05D005438 ORTHO05D006744 3.2e-47 193.4 278 46.0
Lsat_1_v5_gn_1_49360 Lactuca sativa HOM05D005438 ORTHO05D006744 1.5e-44 184.5 216 51.9
Lsat_1_v5_gn_5_103140 Lactuca sativa HOM05D005438 ORTHO05D006744 1.5e-44 184.5 216 51.9
Lsat_1_v5_gn_9_38321 Lactuca sativa HOM05D005438 ORTHO05D006744 1.5e-44 184.5 216 51.9
CSS0040427 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 1.4e-42 177.9 144 67.4
AagrBONN_evm.TU.Sc2ySwM_344.4712 Anthoceros agrestis HOM05D005438 ORTHO05D006744 6.4e-40 169.1 530 30.0
Actinidia28345 Actinidia chinensis HOM05D005438 ORTHO05D006744 3.9e-37 159.8 372 37.9
Cpa.g.sc631.4 Carica papaya HOM05D005438 ORTHO05D006744 2.5e-36 157.1 144 59.0
CDE12G0222 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 4.9e-32 142.9 144 57.6
Pp3c7_27020 Physcomitrium patens HOM05D005438 ORTHO05D006744 1.1e-31 141.7 397 33.5
BcaNung05361 Brassica carinata HOM05D005438 ORTHO05D006744 1.1e-26 125.2 199 43.2
Cpa.g.c39085 Carica papaya HOM05D005438 ORTHO05D006744 3.4e-25 120.2 175 46.9
CBR_g35011 Chara braunii HOM05D005438 ORTHO05D006744 5.4e-23 112.8 325 32.0
ATR0661G444 Amborella trichopoda HOM05D005438 ORTHO05D006744 2.1e-19 100.9 189 37.0
Cre07.g347300 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D021338 6.2e-19 99.4 377 28.1
Cre07.g347400 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D006744 6.2e-19 99.4 377 28.1
ECA246G3112 Erigeron canadensis HOM05D005438 ORTHO05D006744 8.4e-16 89.0 84 56.0
HanXRQChr16g0521071 Helianthus annuus HOM05D005438 ORTHO05D006744 1.6e-11 74.7 42 83.3
AagrBONN_evm.TU.Sc2ySwM_344.4702 Anthoceros agrestis HOM05D005438 ORTHO05D006744 1.1e-07 62.0 126 34.1
ClCG01G002340 Citrullus lanatus HOM05D005438 ORTHO05D006744 1.1e-07 62.0 110 37.3
Cre01.g054000 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D006744 3.5e-06 57.0 77 41.6
MCO11G547 Micromonas commoda HOM05D005438 ORTHO05D006744 6.0e-06 56.2 320 25.3


User provided reference genes

Program Settings