Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007871g0020 Nicotiana tabacum HOM05D007406 ORTHO05D009434 5.6e-107 391.0 200 100.0
CAN.G416.4 Capsicum annuum HOM05D007406 ORTHO05D009434 3.4e-88 328.6 216 81.0
Sopen04g031040 Solanum pennellii HOM05D007406 ORTHO05D009434 3.8e-87 325.1 213 81.7
Solyc04g077450.3 Solanum lycopersicum HOM05D007406 ORTHO05D009434 1.4e-86 323.2 213 81.7
TWI36G1291 Tripterygium wilfordii HOM05D007406 ORTHO05D009434 1.3e-74 283.5 219 70.8
Prupe.1G418200 Prunus persica HOM05D007406 ORTHO05D009434 1.7e-74 283.1 219 69.9
FAN24G2334 Fragaria x ananassa HOM05D007406 ORTHO05D009434 1.1e-73 280.4 219 68.0
Hma1.2p1_1926F.1_g307730 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 1.4e-73 280.0 217 71.0
Thecc.08G083300 Theobroma cacao HOM05D007406 ORTHO05D009434 1.4e-73 280.0 214 69.6
Peaxi162Scf01161g00328 Petunia axillaris HOM05D007406 ORTHO05D009434 1.5e-72 276.6 197 74.1
Actinidia10229 Actinidia chinensis HOM05D007406 ORTHO05D009434 2.0e-72 276.2 200 72.5
MD15G1064200 Malus domestica HOM05D007406 ORTHO05D009434 2.0e-72 276.2 215 68.8
TAR628G0119 Trochodendron aralioides HOM05D007406 ORTHO05D009434 2.0e-72 276.2 216 68.1
Cfa013727 Carpinus fangiana HOM05D007406 ORTHO05D009434 3.4e-72 275.4 217 68.2
RcHm_v2.0_Chr6g0310141 Rosa chinensis HOM05D007406 ORTHO05D009434 3.4e-72 275.4 219 67.6
FvH4_2g32510 Fragaria vesca HOM05D007406 ORTHO05D009434 4.5e-72 275.0 219 67.1
vmacro21408 Vaccinium macrocarpon HOM05D007406 ORTHO05D009434 7.7e-72 274.2 238 63.0
Cc10_g07740 Coffea canephora HOM05D007406 ORTHO05D009434 1.3e-71 273.5 217 67.3
Prupe.6G207800 Prunus persica HOM05D007406 ORTHO05D009434 1.7e-71 273.1 201 71.1
DCAR_020070 Daucus carota HOM05D007406 ORTHO05D009434 3.8e-71 271.9 219 67.6
Potri.002G114400 Populus trichocarpa HOM05D007406 ORTHO05D009434 5.0e-71 271.6 219 67.6
CiPaw.08G053000 Carya illinoinensis HOM05D007406 ORTHO05D009434 6.5e-71 271.2 214 66.8
Haze_22374 Corylus avellana HOM05D007406 ORTHO05D009434 2.5e-70 269.2 245 62.4
Duzib041G0608 Durio zibethinus HOM05D007406 ORTHO05D009434 4.2e-70 268.5 214 66.8
Gohir.A02G079900 Gossypium hirsutum HOM05D007406 ORTHO05D009434 7.2e-70 267.7 214 66.4
Gohir.D02G087800 Gossypium hirsutum HOM05D007406 ORTHO05D009434 7.2e-70 267.7 214 66.4
Gorai.005G098400 Gossypium raimondii HOM05D007406 ORTHO05D009434 9.4e-70 267.3 214 66.4
FAN27G1006 Fragaria x ananassa HOM05D007406 ORTHO05D009434 1.2e-69 266.9 217 66.4
Aqoxy6G02928 Aquilegia oxysepala HOM05D007406 ORTHO05D009434 2.1e-69 266.2 216 67.6
Manes.18G050400 Manihot esculenta HOM05D007406 ORTHO05D009434 1.0e-68 263.8 218 66.1
HanXRQChr08g0226371 Helianthus annuus HOM05D007406 ORTHO05D009434 1.8e-68 263.1 214 65.4
MELO3C016844.2 Cucumis melo HOM05D007406 ORTHO05D009434 3.0e-68 262.3 216 66.7
CANSAT25G0188 Cannabis sativa HOM05D007406 ORTHO05D009434 3.9e-68 261.9 214 65.9
Migut.N02801 Erythranthe guttata HOM05D007406 ORTHO05D009434 3.9e-68 261.9 214 64.0
Nitab4.5_0001494g0090 Nicotiana tabacum HOM05D007406 ORTHO05D009434 8.8e-68 260.8 200 72.5
PGR031G1333 Punica granatum HOM05D007406 ORTHO05D009434 1.5e-67 260.0 224 62.1
ClCG05G017610 Citrullus lanatus HOM05D007406 ORTHO05D009434 2.0e-67 259.6 216 66.7
Cpa.g.sc160.29 Carica papaya HOM05D007406 ORTHO05D009434 4.4e-67 258.5 217 63.1
VMungo0647G2305 Vigna mungo HOM05D007406 ORTHO05D009434 4.4e-67 258.5 218 64.2
Nn6g34540 Nelumbo nucifera HOM05D007406 ORTHO05D009434 9.7e-67 257.3 215 64.2
Atru.chr13.879 Acer truncatum HOM05D007406 ORTHO05D009434 1.7e-66 256.5 217 63.1
Phvul.001G031500 Phaseolus vulgaris HOM05D007406 ORTHO05D009434 2.2e-66 256.1 223 63.2
arahy.Tifrunner.gnm1.ann1.GL3N7R Arachis hypogaea HOM05D007406 ORTHO05D009434 3.7e-66 255.4 218 62.4
Ca_06987_v3 Cicer arietinum L. HOM05D007406 ORTHO05D009434 6.3e-66 254.6 218 63.3
Ciclev10002365m.g Citrus clementina HOM05D007406 ORTHO05D009434 6.3e-66 254.6 215 61.9
Carub.0003s1158 Capsella rubella HOM05D007406 ORTHO05D009434 1.1e-65 253.8 212 64.6
PSO017G2718 Papaver somniferum HOM05D007406 ORTHO05D009434 1.1e-65 253.8 213 63.4
Thhalv10021516m.g Eutrema salsugineum HOM05D007406 ORTHO05D009434 1.8e-65 253.1 214 65.9
TPR.G13149 Trifolium pratense HOM05D007406 ORTHO05D009434 1.8e-65 253.1 218 63.8
Eucgr.F02216 Eucalyptus grandis HOM05D007406 ORTHO05D009434 4.1e-65 251.9 218 62.4
Lalb_Chr14g0368031 Lupinus albus HOM05D007406 ORTHO05D009434 7.0e-65 251.1 218 64.2
AL3G23880 Arabidopsis lyrata HOM05D007406 ORTHO05D009434 9.1e-65 250.8 212 64.2
Lsat_1_v5_gn_1_721 Lactuca sativa HOM05D007406 ORTHO05D009434 9.1e-65 250.8 191 70.7
THA.LOC104799833 Tarenaya hassleriana HOM05D007406 ORTHO05D009434 1.2e-64 250.4 194 67.0
Sed0009876 Sechium edule HOM05D007406 ORTHO05D009434 1.6e-64 250.0 216 63.9
Lj5g0009058 Lotus japonicus HOM05D007406 ORTHO05D009434 2.0e-64 249.6 218 62.8
MSTRG.22203 Avicennia marina HOM05D007406 ORTHO05D009434 2.6e-64 249.2 214 62.6
Glyma.14G090300 Glycine max HOM05D007406 ORTHO05D009434 2.6e-64 249.2 218 62.8
Medtr1g017290 Medicago truncatula HOM05D007406 ORTHO05D009434 3.5e-64 248.8 220 62.3
AT3G12210 Arabidopsis thaliana HOM05D007406 ORTHO05D009434 2.2e-63 246.1 212 62.7
Sp3g10440 Schrenkiella parvula HOM05D007406 ORTHO05D009434 3.8e-63 245.4 214 63.6
BolC5t34221H Brassica oleracea HOM05D007406 ORTHO05D009434 5.0e-63 245.0 213 62.4
BraA05t22509Z Brassica rapa HOM05D007406 ORTHO05D009434 5.0e-63 245.0 213 62.9
Hund05268 Selenicereus undatus HOM05D007406 ORTHO05D009434 3.2e-62 242.3 214 63.1
arahy.Tifrunner.gnm1.ann1.V0H9ZK Arachis hypogaea HOM05D007406 ORTHO05D009434 1.6e-61 240.0 218 60.1
AUR62034986 Chenopodium quinoa HOM05D007406 ORTHO05D009434 2.7e-61 239.2 217 61.3
Rhsim06G0065300 Rhododendron simsii HOM05D007406 ORTHO05D009434 2.7e-61 239.2 167 74.9
ECA247G1434 Erigeron canadensis HOM05D007406 ORTHO05D009434 3.6e-61 238.8 215 60.5
Aa31LG11G6470 Aethionema arabicum HOM05D007406 ORTHO05D009434 2.3e-60 236.1 208 60.6
MBI16_g35726_MAGBIO Magnolia biondii HOM05D007406 ORTHO05D009434 8.8e-60 234.2 229 56.8
SGA_v2.0_scaffold28G11843 Striga asiatica HOM05D007406 ORTHO05D009434 8.8e-60 234.2 217 58.1
EL10Ac1g02342 Beta vulgaris HOM05D007406 ORTHO05D009434 1.2e-59 233.8 214 61.7
SalBow2G1084 Salvia bowleyana HOM05D007406 ORTHO05D009434 2.0e-59 233.0 214 57.0
CSS0019783 Camellia sinensis var. sinensis HOM05D007406 ORTHO05D009434 2.8e-58 229.2 167 72.5
Ah.05g166920 Amaranthus hybridus HOM05D007406 ORTHO05D009434 2.4e-57 226.1 217 58.1
Zm00001eb215640 Zea mays HOM05D007406 ORTHO05D009434 4.1e-57 225.3 209 57.4
ATR0739G008 Amborella trichopoda HOM05D007406 ORTHO05D009434 7.0e-57 224.6 214 56.5
PSO170G2494 Papaver somniferum HOM05D007406 ORTHO05D009434 2.0e-56 223.0 183 64.5
Sabra02G0090500 Salix brachista HOM05D000717 ORTHO05D000555 4.5e-56 221.9 167 68.9
CsaV3_4G035340 Cucumis sativus L. HOM05D007406 ORTHO05D009434 1.7e-55 219.9 175 66.9
Oeu053653.1 Olea europaea HOM05D007406 ORTHO05D009434 8.5e-55 217.6 170 67.1
BcaC05g29272 Brassica carinata HOM05D007406 ORTHO05D009434 1.1e-54 217.2 167 67.1
Lj4C76T9 Lonicera japonica HOM05D007406 ORTHO05D009434 6.1e-53 211.5 155 72.3
COL.COLO4_28451 Corchorus olitorius HOM05D007406 ORTHO05D009434 2.3e-52 209.5 193 59.6
SEGI_23576 Sequoiadendron giganteum HOM05D007406 ORTHO05D009434 4.5e-48 195.3 228 51.3
Pp3c10_2700 Physcomitrium patens HOM05D007406 ORTHO05D009434 2.9e-47 192.6 219 50.2
GSVIVG01009288001 Vitis vinifera HOM05D007406 ORTHO05D009434 5.0e-47 191.8 151 70.2
CARHR086780 Cardamine hirsuta HOM05D007406 ORTHO05D009434 8.0e-45 184.5 138 69.6
CDE04G3630 Ceratophyllum demersum HOM05D007406 ORTHO05D009434 4.5e-40 168.7 141 62.4
AUR62039350 Chenopodium quinoa HOM05D007406 ORTHO05D009434 5.0e-39 165.2 153 61.4
A05p37120 Brassica napus HOM05D007406 ORTHO05D004372 2.2e-34 149.8 125 67.2
C05p55550 Brassica napus HOM05D007406 ORTHO05D004372 2.9e-34 149.4 125 66.4
Sc15g0005330 Simmondsia chinensis HOM05D007406 ORTHO05D009434 3.7e-34 149.1 136 58.8
Hma1.2p1_1926F.1_g307740 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 3.4e-27 125.9 83 79.5
Hma1.2p1_2378F.1_g320925 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 3.4e-27 125.9 83 79.5
Dinv39200 Davidia involucrata HOM05D007406 ORTHO05D009434 9.5e-22 107.8 68 77.9
Aa31sc118G30 Aethionema arabicum HOM05D007406 ORTHO05D009434 6.2e-21 105.1 79 67.1
MCO14G094 Micromonas commoda HOM05D007406 ORTHO05D009434 9.2e-17 91.3 212 34.4
Os03g0728600 Oryza sativa ssp. japonica HOM05D007406 ORTHO05D009434 6.6e-15 85.1 99 43.4
Sc15g0005340 Simmondsia chinensis HOM05D007406 ORTHO05D009434 5.2e-12 75.5 76 56.6
PRCOL_00000641 Prasinoderma coloniale HOM05D007406 ORTHO05D009434 3.4e-11 72.8 163 36.2
Psat0s3650g0120 Pisum sativum HOM05D007406 ORTHO05D009434 8.4e-10 68.2 59 62.7
Cre10.g466400 Chlamydomonas reinhardtii HOM05D007406 ORTHO05D009434 9.2e-09 64.7 153 34.0


User provided reference genes

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