Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 6.5e-57 223.8 110 100.0
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 2.1e-55 218.8 110 97.3
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 4.7e-39 164.5 119 71.4
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 2.0e-37 159.1 117 70.9
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 1.6e-34 149.4 112 71.4
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 1.9e-32 142.5 109 67.0
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 2.1e-31 139.0 109 66.1
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 3.6e-31 138.3 119 61.3
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 3.6e-31 138.3 113 65.5
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 1.1e-30 136.7 107 60.7
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 2.3e-30 135.6 106 63.2
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 4.0e-30 134.8 108 62.0
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 4.0e-30 134.8 113 64.6
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 4.0e-30 134.8 113 64.6
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 8.9e-30 133.7 108 67.6
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 8.9e-30 133.7 107 64.5
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.5e-29 132.9 108 60.2
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 3.4e-29 131.7 106 62.3
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 4.4e-29 131.3 106 62.3
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 4.4e-29 131.3 106 63.2
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 4.4e-29 131.3 107 62.6
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 4.4e-29 131.3 109 58.7
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 7.5e-29 130.6 106 60.4
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 7.5e-29 130.6 105 61.0
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 7.5e-29 130.6 107 60.7
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 9.9e-29 130.2 106 60.4
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 9.9e-29 130.2 106 61.3
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 9.9e-29 130.2 109 59.6
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 1.3e-28 129.8 107 59.8
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 1.7e-28 129.4 106 59.4
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.7e-28 129.4 107 59.8
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 2.9e-28 128.6 106 60.4
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 2.9e-28 128.6 109 57.8
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 8.3e-28 127.1 106 59.4
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 8.3e-28 127.1 108 61.1
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 1.1e-27 126.7 106 59.4
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 1.4e-27 126.3 107 60.7
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 2.4e-27 125.6 106 59.4
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 2.4e-27 125.6 106 59.4
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 2.4e-27 125.6 106 61.3
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 4.1e-27 124.8 109 61.5
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 4.1e-27 124.8 108 57.4
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 4.1e-27 124.8 107 59.8
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 5.4e-27 124.4 106 57.5
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 5.4e-27 124.4 107 55.1
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 7.1e-27 124.0 106 57.5
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 7.1e-27 124.0 106 61.3
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 7.1e-27 124.0 109 55.0
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 9.2e-27 123.6 109 54.1
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 9.2e-27 123.6 108 57.4
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 9.2e-27 123.6 107 59.8
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 9.2e-27 123.6 106 58.5
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 1.2e-26 123.2 106 59.4
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.1e-26 122.5 106 55.7
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 2.1e-26 122.5 106 55.7
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 3.5e-26 121.7 106 60.4
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 4.6e-26 121.3 106 55.7
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 4.6e-26 121.3 101 63.4
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 4.6e-26 121.3 109 53.2
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 4.6e-26 121.3 105 58.1
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 6.0e-26 120.9 106 54.7
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 7.8e-26 120.6 104 60.6
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 7.8e-26 120.6 109 53.2
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 7.8e-26 120.6 110 57.3
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 7.8e-26 120.6 107 56.1
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 7.8e-26 120.6 106 55.7
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 7.8e-26 120.6 106 56.6
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 7.8e-26 120.6 106 56.6
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 1.0e-25 120.2 105 58.1
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 1.0e-25 120.2 105 58.1
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 1.3e-25 119.8 106 57.5
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 1.3e-25 119.8 106 56.6
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 2.3e-25 119.0 107 57.0
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 3.0e-25 118.6 109 54.1
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 3.0e-25 118.6 105 57.1
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 3.9e-25 118.2 108 54.6
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 3.9e-25 118.2 112 57.1
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 3.9e-25 118.2 105 58.1
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 5.1e-25 117.9 116 51.7
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 6.6e-25 117.5 116 51.7
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 6.6e-25 117.5 99 59.6
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 6.6e-25 117.5 105 61.9
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 8.6e-25 117.1 104 56.7
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 2.5e-24 115.5 107 55.1
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 2.5e-24 115.5 109 54.1
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 3.3e-24 115.2 113 51.3
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 3.3e-24 115.2 110 51.8
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 3.3e-24 115.2 110 51.8
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 4.3e-24 114.8 108 51.9
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 5.6e-24 114.4 109 53.2
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 9.5e-24 113.6 114 50.9
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 9.5e-24 113.6 106 51.9
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 9.5e-24 113.6 106 50.9
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 9.5e-24 113.6 113 52.2
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 2.1e-23 112.5 106 53.8
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 4.7e-23 111.3 116 48.3
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 6.2e-23 110.9 116 48.3
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 6.2e-23 110.9 116 48.3
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 6.2e-23 110.9 116 48.3
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 6.2e-23 110.9 99 56.6
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 1.1e-22 110.2 106 50.9
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 1.4e-22 109.8 119 47.1
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 1.4e-22 109.8 116 48.3
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 4.0e-22 108.2 106 48.1
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 5.2e-22 107.8 107 50.5
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 8.9e-22 107.1 115 48.7
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 3.4e-21 105.1 106 48.1
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 3.4e-21 105.1 99 53.5
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 4.4e-21 104.8 120 46.7
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 4.4e-21 104.8 107 46.7
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 4.4e-21 104.8 105 50.5
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 5.8e-21 104.4 106 49.1
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 2.2e-20 102.4 110 51.8
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 3.8e-20 101.7 114 43.9
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 4.9e-20 101.3 97 55.7
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 6.4e-20 100.9 114 45.6
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 1.4e-19 99.8 115 47.0
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 2.4e-19 99.0 107 43.9
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 3.2e-19 98.6 95 53.7
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 3.2e-19 98.6 110 47.3
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 5.4e-19 97.8 116 44.0
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 5.4e-19 97.8 116 44.0
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 6.0e-18 94.4 115 43.5
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 1.5e-16 89.7 107 41.1
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 1.2e-13 80.1 83 51.8
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 3.8e-12 75.1 62 61.3
SalBow6G6594 Salvia bowleyana HOM05D006069 ORTHO05D008101 5.1e-09 64.7 56 60.7
SalBow6G5718 Salvia bowleyana HOM05D006069 ORTHO05D008101 9.6e-08 60.5 55 60.0
A07p41340 Brassica napus HOM05D006069 ORTHO05D032697 1.8e-06 56.2 68 41.2


User provided reference genes

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