Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 1.6e-266 922.2 443 100.0
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 2.9e-220 768.5 393 92.9
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 6.2e-207 724.2 416 83.2
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 1.1e-206 723.4 399 86.0
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 4.5e-205 718.0 393 85.0
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 1.3e-204 716.5 415 81.9
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 1.2e-194 683.3 370 85.9
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 6.0e-194 681.0 397 81.6
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 4.5e-189 664.8 361 85.0
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 7.1e-187 657.5 395 76.7
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 1.0e-185 653.7 397 76.3
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 2.4e-182 642.5 395 75.2
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 6.5e-180 634.4 430 69.1
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 2.5e-179 632.5 416 70.9
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 4.2e-179 631.7 398 73.1
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 7.2e-179 630.9 395 73.9
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 1.8e-177 626.3 398 71.4
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 6.7e-177 624.4 397 72.0
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 2.5e-176 622.5 395 72.2
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 3.3e-176 622.1 415 69.9
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 9.7e-176 620.5 398 71.9
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 2.2e-175 619.4 418 69.4
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 3.7e-175 618.6 396 71.2
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 9.1e-174 614.0 395 70.6
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 9.1e-174 614.0 395 70.6
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 1.2e-173 613.6 398 72.1
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 2.0e-173 612.8 396 71.7
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 8.5e-172 607.4 395 70.4
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 8.5e-172 607.4 396 71.5
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 7.2e-171 604.4 502 60.0
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 9.4e-171 604.0 502 60.0
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 9.4e-171 604.0 502 60.4
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.2e-170 603.6 502 60.0
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 1.2e-170 603.6 396 69.4
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.6e-170 603.2 502 60.2
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.1e-170 602.8 396 70.7
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.7e-170 602.4 502 60.2
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.7e-170 601.7 502 60.4
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 6.1e-170 601.3 502 59.8
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 7.9e-170 600.9 398 68.8
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.0e-169 600.5 502 60.2
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 1.0e-169 600.5 395 70.4
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 1.4e-169 600.1 376 71.5
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.3e-169 599.4 502 60.0
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 2.3e-169 599.4 407 68.8
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 3.0e-169 599.0 429 66.9
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 8.8e-169 597.4 396 68.4
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 1.1e-168 597.0 393 70.2
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 1.1e-168 597.0 436 65.6
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 2.0e-168 596.3 395 69.1
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 2.6e-168 595.9 395 68.9
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 2.6e-168 595.9 416 68.0
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.3e-168 595.5 502 59.6
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.7e-168 594.7 502 59.6
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 2.2e-167 592.8 399 66.2
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 3.7e-167 592.0 392 69.1
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 6.3e-167 591.3 396 68.7
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 8.2e-167 590.9 400 70.0
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 8.2e-167 590.9 393 69.7
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 4.1e-166 588.6 397 69.5
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 5.3e-166 588.2 372 72.3
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 7.0e-166 587.8 397 68.5
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 1.2e-165 587.0 397 68.8
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 1.5e-165 586.6 397 68.0
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 1.5e-165 586.6 393 69.2
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 3.5e-165 585.5 397 68.3
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 3.5e-165 585.5 397 68.3
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 1.0e-164 583.9 348 76.7
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 1.3e-164 583.6 403 67.5
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 3.8e-164 582.0 397 68.8
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 6.5e-164 581.3 395 67.6
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 1.1e-163 580.5 395 69.6
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 1.9e-163 579.7 399 67.7
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 2.5e-163 579.3 417 66.2
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 3.2e-163 578.9 397 68.8
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 5.5e-163 578.2 395 66.6
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 7.2e-163 577.8 397 68.3
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 1.4e-161 573.5 391 68.8
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 2.3e-161 572.8 397 66.8
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 2.0e-160 569.7 420 63.8
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 4.1e-158 562.0 348 73.3
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 4.1e-158 562.0 399 64.4
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 1.4e-153 547.0 350 70.9
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 4.4e-152 542.0 394 63.7
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 1.1e-150 537.3 418 63.4
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 9.1e-150 534.3 392 64.0
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 5.2e-145 518.5 397 61.7
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 1.8e-142 510.0 400 61.0
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 4.1e-142 508.8 435 58.2
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 3.8e-140 502.3 417 60.4
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 4.9e-135 485.3 404 57.2
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 4.0e-129 465.7 293 73.4
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 6.8e-129 464.9 396 56.1
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 4.7e-122 442.2 392 55.1
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 1.8e-113 413.7 426 51.6
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 4.4e-112 409.1 352 58.8
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 3.9e-100 369.4 392 49.5
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 1.1e-89 334.7 286 56.6
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 1.1e-89 334.7 211 72.0
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 2.5e-83 313.5 423 43.3
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 1.3e-76 291.2 427 38.4
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 2.5e-67 260.4 439 37.1
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 2.9e-63 246.9 303 43.9
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 5.1e-60 236.1 162 64.2
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 8.2e-50 202.2 129 69.8
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 7.2e-38 162.5 379 29.8
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 3.4e-35 153.7 119 58.8
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 7.2e-30 136.0 299 31.4
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 3.6e-29 133.7 93 68.8
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 1.0e-23 115.5 282 31.6
MBI01_g04536_MAGBIO Magnolia biondii HOM05D007060 ORTHO05D009087 2.9e-18 97.4 67 70.1
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 4.3e-14 83.6 59 64.4


User provided reference genes

Program Settings