Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007793g0010 Nicotiana tabacum HOM05D007722 ORTHO05D009730 2.8e-63 245.4 145 100.0
Nitab4.5_0011590g0030 Nicotiana tabacum HOM05D007722 ORTHO05D009730 7.6e-53 210.7 154 85.7
Sopen03g035570 Solanum pennellii HOM05D007722 ORTHO05D009730 7.1e-43 177.6 146 76.7
Solyc03g116660.3 Solanum lycopersicum HOM05D007722 ORTHO05D009730 9.3e-43 177.2 146 77.4
PGSC0003DMG401000617 Solanum tuberosum HOM05D007722 ORTHO05D009730 3.0e-41 172.2 147 76.9
Peaxi162Scf00332g00773 Petunia axillaris HOM05D007722 ORTHO05D009730 1.9e-35 152.9 141 74.5
Oeu045155.1 Olea europaea HOM05D007722 ORTHO05D009730 4.6e-18 95.1 101 51.5
Dinv30597 Davidia involucrata HOM05D007722 ORTHO05D009730 1.9e-16 89.7 120 50.0
TAR636G1020 Trochodendron aralioides HOM05D007722 ORTHO05D009730 4.3e-16 88.6 104 50.0
CSS0036618 Camellia sinensis var. sinensis HOM05D007722 ORTHO05D009730 1.6e-15 86.7 128 46.1
Duzib160G0092 Durio zibethinus HOM05D007722 ORTHO05D009730 5.3e-14 81.6 49 73.5
COL.COLO4_12955 Corchorus olitorius HOM05D007722 ORTHO05D009730 9.0e-14 80.9 94 48.9
Gohir.A10G073900 Gossypium hirsutum HOM05D007722 ORTHO05D009730 2.0e-13 79.7 50 70.0
Gohir.D10G075700 Gossypium hirsutum HOM05D007722 ORTHO05D009730 2.0e-13 79.7 50 70.0
Rhsim08G0213600 Rhododendron simsii HOM05D007722 ORTHO05D009730 2.0e-13 79.7 45 75.6
Gorai.011G083600 Gossypium raimondii HOM05D007722 ORTHO05D009730 2.6e-13 79.3 50 68.0
Migut.D01071 Erythranthe guttata HOM05D007722 ORTHO05D009730 4.5e-13 78.6 49 71.4
Prupe.3G085400 Prunus persica HOM05D007722 ORTHO05D009730 7.7e-13 77.8 113 46.9
Lalb_Chr04g0262381 Lupinus albus HOM05D007722 ORTHO05D009730 1.0e-12 77.4 112 47.3
MBI01_g35411_MAGBIO Magnolia biondii HOM05D007722 ORTHO05D009730 1.0e-12 77.4 99 44.4
Thecc.06G022100 Theobroma cacao HOM05D007722 ORTHO05D009730 1.0e-12 77.4 85 49.4
GSVIVG01017323001 Vitis vinifera HOM05D007722 ORTHO05D009730 1.0e-12 77.4 136 46.3
Nn2g12058 Nelumbo nucifera HOM05D007722 ORTHO05D009730 1.3e-12 77.0 49 67.3
Medtr4g010270 Medicago truncatula HOM05D007722 ORTHO05D009730 2.2e-12 76.3 49 71.4
Gohir.A05G126200 Gossypium hirsutum HOM05D007722 ORTHO05D009730 2.9e-12 75.9 50 68.0
Gohir.D05G127100 Gossypium hirsutum HOM05D007722 ORTHO05D009730 2.9e-12 75.9 50 68.0
Gorai.009G131200 Gossypium raimondii HOM05D007722 ORTHO05D009730 2.9e-12 75.9 50 68.0
Lalb_Chr25g0279351 Lupinus albus HOM05D007722 ORTHO05D009730 2.9e-12 75.9 48 72.9
Psat7g256360 Pisum sativum HOM05D007722 ORTHO05D009730 2.9e-12 75.9 116 46.6
CANSAT56G0372 Cannabis sativa HOM05D007722 ORTHO05D009730 3.8e-12 75.5 49 73.5
Potri.001G192500 Populus trichocarpa HOM05D007722 ORTHO05D009730 3.8e-12 75.5 51 70.6
Aqoxy7G03685 Aquilegia oxysepala HOM05D007722 ORTHO05D009730 6.5e-12 74.7 51 68.6
Cfa001975 Carpinus fangiana HOM05D007722 ORTHO05D009730 6.5e-12 74.7 49 71.4
Glyma.08G212200 Glycine max HOM05D007722 ORTHO05D009730 8.5e-12 74.3 48 72.9
EL10Ac9g21908 Beta vulgaris HOM05D007722 ORTHO05D009730 1.9e-11 73.2 51 68.6
QL05p029543 Quercus lobata HOM05D007722 ORTHO05D009730 1.9e-11 73.2 48 70.8
HanXRQChr16g0500401 Helianthus annuus HOM05D007722 ORTHO05D009730 2.5e-11 72.8 46 67.4
MD17G1210100 Malus domestica HOM05D007722 ORTHO05D009730 4.2e-11 72.0 106 45.3
VMungo0331G1522 Vigna mungo HOM05D007722 ORTHO05D009730 4.2e-11 72.0 43 76.7
FAN09G0448 Fragaria x ananassa HOM05D007722 ORTHO05D009730 5.5e-11 71.6 49 69.4
Lj3g0002989 Lotus japonicus HOM05D007722 ORTHO05D009730 5.5e-11 71.6 108 52.8
ECA232G4504 Erigeron canadensis HOM05D000985 ORTHO05D000866 7.2e-11 71.2 46 65.2
Sc10g0005890 Simmondsia chinensis HOM05D007722 ORTHO05D009730 9.4e-11 70.9 48 62.5
Haze_16545 Corylus avellana HOM05D007722 ORTHO05D009730 1.2e-10 70.5 121 43.0
SGA_v2.0_scaffold37G14773 Striga asiatica HOM05D007722 ORTHO05D009730 1.2e-10 70.5 49 61.2
Phvul.010G155500 Phaseolus vulgaris HOM05D007722 ORTHO05D009730 2.1e-10 69.7 115 44.3
FvH4_6g29860 Fragaria vesca HOM05D007722 ORTHO05D009730 2.7e-10 69.3 98 46.9
FAN14G1239 Fragaria x ananassa HOM05D007722 ORTHO05D009730 2.7e-10 69.3 98 46.9
Eucgr.F03868 Eucalyptus grandis HOM05D007722 ORTHO05D009730 6.1e-10 68.2 48 66.7
Eucgr.L02714 Eucalyptus grandis HOM05D007722 ORTHO05D009730 6.1e-10 68.2 48 66.7
Glyma.07G030600 Glycine max HOM05D007722 ORTHO05D009730 6.1e-10 68.2 125 42.4
PGR102G2260 Punica granatum HOM05D007722 ORTHO05D009730 6.1e-10 68.2 85 50.6
unitig_0.g1117 Utricularia gibba HOM05D007722 ORTHO05D009730 6.1e-10 68.2 49 61.2
CDE06G0954 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 2.3e-09 66.2 76 50.0
ClCG09G002890 Citrullus lanatus HOM05D007722 ORTHO05D009730 2.3e-09 66.2 49 69.4
THA.LOC104810506 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 3.9e-09 65.5 47 61.7
Sabra01G0149600 Salix brachista HOM05D007722 ORTHO05D009730 8.8e-09 64.3 39 69.2
Manes.04G113466 Manihot esculenta HOM05D007722 ORTHO05D009730 2.5e-08 62.8 51 60.8
Thhalv10021781m.g Eutrema salsugineum HOM05D007722 ORTHO05D009730 3.3e-08 62.4 47 55.3
Os01g0392100 Oryza sativa ssp. japonica HOM05D007722 ORTHO05D009730 4.3e-08 62.0 48 56.2
Sp3g14100 Schrenkiella parvula HOM05D007722 ORTHO05D009730 4.3e-08 62.0 47 55.3
Sed0026756 Sechium edule HOM05D007722 ORTHO05D009730 4.3e-08 62.0 137 39.4
Manes.11G056000 Manihot esculenta HOM05D007722 ORTHO05D009730 5.7e-08 61.6 51 60.8
Zm00001eb221290 Zea mays HOM05D007722 ORTHO05D009730 5.7e-08 61.6 48 58.3
CARHR090870 Cardamine hirsuta HOM05D007722 ORTHO05D009730 7.4e-08 61.2 47 55.3
PSO210G0183 Papaver somniferum HOM05D007722 ORTHO05D009730 1.7e-07 60.1 131 37.4
DCAR_025509 Daucus carota HOM05D007722 ORTHO05D009730 2.2e-07 59.7 115 40.0
THA.LOC104818136 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 2.8e-07 59.3 48 58.3
CiPaw.01G246700 Carya illinoinensis HOM05D007722 ORTHO05D009730 3.7e-07 58.9 72 47.2
BcaC09g48556 Brassica carinata HOM05D007722 ORTHO05D009730 8.2e-07 57.8 48 54.2
A01p38330 Brassica napus HOM05D007722 ORTHO05D009730 8.2e-07 57.8 48 54.2
BraA01t03884Z Brassica rapa HOM05D007722 ORTHO05D009730 8.2e-07 57.8 48 54.2
BcaB04g20904 Brassica carinata HOM05D007722 ORTHO05D009730 1.1e-06 57.4 48 54.2
BcaC05g28932 Brassica carinata HOM05D000020 ORTHO05D000543 1.1e-06 57.4 47 51.1
C05p50590 Brassica napus HOM05D000020 ORTHO05D000543 1.1e-06 57.4 47 51.1
PSO210G5680 Papaver somniferum HOM05D007722 ORTHO05D009730 1.1e-06 57.4 138 37.0
HPP92_000666 Vanilla planifolia HOM05D007722 ORTHO05D009730 1.1e-06 57.4 49 51.0
Carub.0003s1552 Capsella rubella HOM05D007722 ORTHO05D009730 1.8e-06 56.6 111 41.4
CDE07G1717 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 1.8e-06 56.6 116 37.1
Aa31LG8G2980 Aethionema arabicum HOM05D007722 ORTHO05D009730 3.1e-06 55.8 47 51.1
BcaB06g25688 Brassica carinata HOM05D000020 ORTHO05D001963 9.1e-06 54.3 44 54.5


User provided reference genes

Program Settings