Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007778g0010 Nicotiana tabacum HOM05D000011 ORTHO05D020314 1.1e-84 316.6 164 100.0
Nitab4.5_0000221g0060 Nicotiana tabacum HOM05D000011 ORTHO05D000018 1.7e-61 239.6 136 91.9
Nitab4.5_0007199g0020 Nicotiana tabacum HOM05D000011 ORTHO05D000018 1.8e-42 176.4 133 70.7
Nitab4.5_0009770g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 8.9e-42 174.1 141 63.8
Nitab4.5_0000221g0110 Nicotiana tabacum HOM05D000011 ORTHO05D000018 1.2e-41 173.7 137 70.1
Nitab4.5_0000221g0180 Nicotiana tabacum HOM05D000011 ORTHO05D000018 2.0e-41 172.9 135 66.7
Nitab4.5_0012295g0010 Nicotiana tabacum HOM05D000011 ORTHO05D020314 4.9e-32 141.7 118 67.8
Nitab4.5_0009770g0020 Nicotiana tabacum HOM05D000011 ORTHO05D000018 8.9e-26 120.9 100 66.0
Nitab4.5_0003028g0020 Nicotiana tabacum HOM05D000011 ORTHO05D020314 4.1e-23 112.1 82 69.5
Peaxi162Scf00159g00515 Petunia axillaris HOM05D000011 ORTHO05D020314 6.6e-21 104.8 121 48.8
PGSC0003DMG400030497 Solanum tuberosum HOM05D000011 ORTHO05D000018 5.6e-20 101.7 120 50.0
Solyc05g008070.4 Solanum lycopersicum HOM05D000011 ORTHO05D000018 8.9e-18 94.4 161 38.5
Sopen05g003910 Solanum pennellii HOM05D000011 ORTHO05D000018 1.5e-17 93.6 161 37.9
PGSC0003DMG401001984 Solanum tuberosum HOM05D000011 ORTHO05D000018 5.8e-17 91.7 122 44.3
CAN.G1298.11 Capsicum annuum HOM05D000011 ORTHO05D000018 1.3e-16 90.5 121 45.5
CAN.G202.3 Capsicum annuum HOM05D000011 ORTHO05D000018 2.9e-16 89.4 125 43.2
CAN.G1298.8 Capsicum annuum HOM05D000011 ORTHO05D000018 3.8e-16 89.0 135 43.7
Nitab4.5_0006512g0090 Nicotiana tabacum HOM05D000011 ORTHO05D000018 3.8e-16 89.0 124 44.4
PGSC0003DMG400030498 Solanum tuberosum HOM05D000011 ORTHO05D000018 4.9e-16 88.6 122 45.1
Nitab4.5_0000742g0150 Nicotiana tabacum HOM05D000011 ORTHO05D000018 6.4e-16 88.2 123 43.9
PGSC0003DMG400001983 Solanum tuberosum HOM05D000011 ORTHO05D000018 6.4e-16 88.2 130 41.5
CAN.G1298.7 Capsicum annuum HOM05D000011 ORTHO05D000018 1.4e-15 87.0 125 41.6
Nitab4.5_0004816g0030 Nicotiana tabacum HOM05D000011 ORTHO05D000018 1.4e-15 87.0 124 42.7
CAN.G202.4 Capsicum annuum HOM05D000011 ORTHO05D000018 1.9e-15 86.7 135 43.0
CAN.G989.11 Capsicum annuum HOM05D000011 ORTHO05D000018 1.9e-15 86.7 135 43.0
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 1.9e-15 86.7 137 42.3
PGSC0003DMG400024429 Solanum tuberosum HOM05D000011 ORTHO05D000018 1.9e-15 86.7 120 42.5
Solyc12g039060.1 Solanum lycopersicum HOM05D000011 ORTHO05D020314 3.2e-15 85.9 108 48.1
PGSC0003DMG400024430 Solanum tuberosum HOM05D000011 ORTHO05D000018 4.2e-15 85.5 120 43.3
PGSC0003DMG400001981 Solanum tuberosum HOM05D000011 ORTHO05D000018 9.2e-15 84.3 129 38.0
Solyc11g020100.3 Solanum lycopersicum HOM05D000011 ORTHO05D000018 1.2e-14 84.0 123 42.3
CAN.G1922.2 Capsicum annuum HOM05D000011 ORTHO05D020314 1.6e-14 83.6 124 44.4
PGSC0003DMG400001990 Solanum tuberosum HOM05D000011 ORTHO05D000018 2.7e-14 82.8 128 43.8
PGSC0003DMG401002242 Solanum tuberosum HOM05D000011 ORTHO05D000018 2.7e-14 82.8 120 43.3
Sopen11g010240 Solanum pennellii HOM05D000011 ORTHO05D000018 7.8e-14 81.3 123 41.5
Solyc12g017800.3 Solanum lycopersicum HOM05D000011 ORTHO05D000018 1.7e-13 80.1 128 40.6
Solyc11g006640.3 Solanum lycopersicum HOM05D000011 ORTHO05D000018 2.3e-13 79.7 119 41.2
PGSC0003DMG400001996 Solanum tuberosum HOM05D000011 ORTHO05D000018 3.0e-13 79.3 120 41.7
Sopen07g025300 Solanum pennellii HOM05D000011 ORTHO05D000018 3.9e-13 79.0 135 42.2
Sopen12g008600 Solanum pennellii HOM05D000011 ORTHO05D000018 3.9e-13 79.0 128 40.6
Sopen10g022740 Solanum pennellii HOM05D000011 ORTHO05D000018 5.1e-13 78.6 120 40.0
CAN.G1298.10 Capsicum annuum HOM05D000011 ORTHO05D000018 6.6e-13 78.2 120 42.5
CAN.G143.30 Capsicum annuum HOM05D000011 ORTHO05D000018 6.6e-13 78.2 129 40.3
PGSC0003DMG400001994 Solanum tuberosum HOM05D000011 ORTHO05D000018 8.7e-13 77.8 137 38.7
Solyc10g051050.3 Solanum lycopersicum HOM05D000011 ORTHO05D000018 1.1e-12 77.4 120 40.0
Sopen11g002570 Solanum pennellii HOM05D000011 ORTHO05D000018 1.5e-12 77.0 119 40.3
Solyc11g006530.3 Solanum lycopersicum HOM05D000011 ORTHO05D000018 4.3e-12 75.5 120 41.7
Sopen11g002560 Solanum pennellii HOM05D000011 ORTHO05D000018 4.3e-12 75.5 137 37.2
CAN.G3131.1 Capsicum annuum HOM05D000011 ORTHO05D000018 7.3e-12 74.7 159 37.1
Solyc07g049700.1 Solanum lycopersicum HOM05D000011 ORTHO05D000018 7.3e-12 74.7 128 42.2
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 7.3e-12 74.7 123 39.8
Solyc11g006630.1 Solanum lycopersicum HOM05D000011 ORTHO05D000018 2.1e-11 73.2 126 38.9
PGSC0003DMG402001979 Solanum tuberosum HOM05D000011 ORTHO05D000018 2.1e-11 73.2 130 39.2
Nitab4.5_0000221g0170 Nicotiana tabacum HOM05D000011 ORTHO05D000018 3.6e-11 72.4 91 49.5
Sopen11g002420 Solanum pennellii HOM05D000011 ORTHO05D000018 4.7e-11 72.0 127 40.2
Peaxi162Scf00870g00217 Petunia axillaris HOM05D000011 ORTHO05D000018 1.1e-10 70.9 117 35.9
Solyc11g006520.2 Solanum lycopersicum HOM05D000011 ORTHO05D000018 1.1e-10 70.9 120 40.8
Peaxi162Scf00207g00446 Petunia axillaris HOM05D000011 ORTHO05D000018 1.8e-10 70.1 117 35.0
CAN.G1298.9 Capsicum annuum HOM05D000011 ORTHO05D000018 9.0e-10 67.8 107 40.2
Peaxi162Scf00337g00624 Petunia axillaris HOM05D000011 ORTHO05D000018 1.5e-09 67.0 129 37.2
PGSC0003DMG400001081 Solanum tuberosum HOM05D000011 ORTHO05D000018 4.4e-09 65.5 124 38.7
Cc10_g10090 Coffea canephora HOM05D000011 ORTHO05D000018 2.9e-08 62.8 134 33.6
Nitab4.5_0006034g0020 Nicotiana tabacum HOM05D000011 ORTHO05D020288 4.9e-08 62.0 119 37.0
Nitab4.5_0006034g0030 Nicotiana tabacum HOM05D000011 ORTHO05D000018 4.9e-08 62.0 120 35.8
Nitab4.5_0007131g0010 Nicotiana tabacum HOM05D000037 ORTHO05D000018 4.9e-08 62.0 142 33.1
Peaxi162Scf00014g00127 Petunia axillaris HOM05D000011 ORTHO05D000018 4.9e-08 62.0 118 40.7
CAN.G1524.19 Capsicum annuum HOM05D000011 ORTHO05D016881 6.4e-08 61.6 123 37.4
Nitab4.5_0007534g0020 Nicotiana tabacum HOM05D000011 ORTHO05D000018 6.4e-08 61.6 156 29.5
Peaxi162Scf00324g00517 Petunia axillaris HOM05D000011 ORTHO05D000018 6.4e-08 61.6 120 33.3
CAN.G1084.21 Capsicum annuum HOM05D000011 ORTHO05D000018 2.4e-07 59.7 142 31.0
CAN.G1084.3 Capsicum annuum HOM05D000011 ORTHO05D000018 2.4e-07 59.7 142 31.0
Nitab4.5_0000622g0110 Nicotiana tabacum HOM05D000011 ORTHO05D000018 2.4e-07 59.7 125 34.4
Nitab4.5_0003798g0020 Nicotiana tabacum HOM05D000011 ORTHO05D000018 2.4e-07 59.7 175 30.3
Oeu004601.1 Olea europaea HOM05D000011 ORTHO05D000018 2.4e-07 59.7 120 35.8
Oeu044384.1 Olea europaea HOM05D000011 ORTHO05D000018 2.4e-07 59.7 128 34.4
Solyc12g009450.3 Solanum lycopersicum HOM05D000011 ORTHO05D000018 2.4e-07 59.7 125 28.8
CAN.G1357.9 Capsicum annuum HOM05D000011 ORTHO05D000018 3.2e-07 59.3 119 30.3
Sopen12g001930 Solanum pennellii HOM05D000011 ORTHO05D000018 3.2e-07 59.3 166 31.9
Oeu039660.1 Olea europaea HOM05D000011 ORTHO05D000018 4.2e-07 58.9 121 34.7
Nitab4.5_0005875g0020 Nicotiana tabacum HOM05D000011 ORTHO05D000018 7.1e-07 58.2 166 31.3
Lsat_1_v5_gn_3_132141 Lactuca sativa HOM05D000011 ORTHO05D000018 1.2e-06 57.4 77 45.5
Peaxi162Scf00078g00345 Petunia axillaris HOM05D000011 ORTHO05D000018 1.2e-06 57.4 145 35.2
SalBow1G3657 Salvia bowleyana HOM05D000011 ORTHO05D000018 1.6e-06 57.0 77 44.2
CAN.G397.12 Capsicum annuum HOM05D000011 ORTHO05D000018 2.1e-06 56.6 125 29.6
Nitab4.5_0004079g0010 Nicotiana tabacum HOM05D000011 ORTHO05D016881 2.1e-06 56.6 131 34.4
Nitab4.5_0010481g0020 Nicotiana tabacum HOM05D000011 ORTHO05D000018 2.1e-06 56.6 128 30.5
PGSC0003DMG400024202 Solanum tuberosum HOM05D000011 ORTHO05D000018 2.7e-06 56.2 119 33.6
Oeu042572.1 Olea europaea HOM05D000784 ORTHO05D000116 3.5e-06 55.8 123 32.5
Lj6C734T18 Lonicera japonica HOM05D000011 ORTHO05D000018 4.6e-06 55.5 119 35.3
Nitab4.5_0000366g0120 Nicotiana tabacum HOM05D000011 ORTHO05D000018 4.6e-06 55.5 79 44.3
Nitab4.5_0002365g0050 Nicotiana tabacum HOM05D000011 ORTHO05D000018 4.6e-06 55.5 119 35.3
Oeu008808.2 Olea europaea HOM05D000011 ORTHO05D000018 4.6e-06 55.5 163 29.4
Hma1.2p1_0346F.1_g131510 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 6.0e-06 55.1 77 41.6
Nitab4.5_0002658g0040 Nicotiana tabacum HOM05D000011 ORTHO05D000018 6.0e-06 55.1 128 31.2
Peaxi162Scf00892g00121 Petunia axillaris HOM05D000011 ORTHO05D000018 6.0e-06 55.1 78 42.3
Hma1.2p1_0234F.1_g098390 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 7.8e-06 54.7 77 41.6
Nitab4.5_0006120g0050 Nicotiana tabacum HOM05D000011 ORTHO05D016881 7.8e-06 54.7 131 33.6


User provided reference genes

Program Settings