Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007774g0040 Nicotiana tabacum HOM05D000030 ORTHO05D009563 1.2e-100 369.8 182 100.0
PGSC0003DMG400005619 Solanum tuberosum HOM05D000030 ORTHO05D009563 6.4e-25 118.2 155 49.0
Nitab4.5_0003716g0090 Nicotiana tabacum HOM05D000030 ORTHO05D009563 1.3e-22 110.5 158 46.2
Solyc03g119830.4 Solanum lycopersicum HOM05D000030 ORTHO05D009563 1.3e-22 110.5 158 44.9
Nitab4.5_0000410g0150 Nicotiana tabacum HOM05D000030 ORTHO05D009563 1.7e-22 110.2 158 44.9
Sopen03g038690 Solanum pennellii HOM05D000030 ORTHO05D009563 2.3e-22 109.8 158 44.3
Peaxi162Scf00015g00634 Petunia axillaris HOM05D000030 ORTHO05D009563 3.9e-22 109.0 155 45.8
Cc04_g07610 Coffea canephora HOM05D000030 ORTHO05D009563 1.1e-19 100.9 155 43.2
Lj9C432T16 Lonicera japonica HOM05D000030 ORTHO05D009563 2.0e-18 96.7 153 40.5
Ciclev10019100m.g Citrus clementina HOM05D000030 ORTHO05D009563 2.6e-18 96.3 159 40.9
GSVIVG01008224001 Vitis vinifera HOM05D000030 ORTHO05D009563 5.8e-18 95.1 155 39.4
Prupe.5G216200 Prunus persica HOM05D000030 ORTHO05D009563 2.9e-17 92.8 155 39.4
COL.COLO4_22696 Corchorus olitorius HOM05D000030 ORTHO05D009563 3.8e-17 92.4 152 38.8
VMungo1215G2945 Vigna mungo HOM05D000030 ORTHO05D009563 4.9e-17 92.0 152 42.1
Glyma.05G013900 Glycine max HOM05D000030 ORTHO05D009563 1.4e-16 90.5 153 41.2
Sabra12G0040700 Salix brachista HOM05D000030 ORTHO05D009563 1.4e-16 90.5 159 39.0
Thecc.03G027200 Theobroma cacao HOM05D000030 ORTHO05D009563 1.4e-16 90.5 152 38.8
CiPaw.15G125300 Carya illinoinensis HOM05D000030 ORTHO05D009563 1.9e-16 90.1 159 39.0
Migut.D01584 Erythranthe guttata HOM05D000030 ORTHO05D009563 1.9e-16 90.1 155 39.4
Manes.05G118100 Manihot esculenta HOM05D000030 ORTHO05D009563 1.9e-16 90.1 155 38.1
Potri.012G059200 Populus trichocarpa HOM05D000030 ORTHO05D009563 1.9e-16 90.1 159 39.0
CSS0033246 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D009563 4.2e-16 89.0 157 38.2
Lj4g0007233 Lotus japonicus HOM05D000030 ORTHO05D009563 7.1e-16 88.2 161 37.3
Gohir.A11G007550 Gossypium hirsutum HOM05D000030 ORTHO05D009563 9.3e-16 87.8 152 37.5
Gohir.D11G008433 Gossypium hirsutum HOM05D000030 ORTHO05D009563 9.3e-16 87.8 152 37.5
Gorai.007G008000 Gossypium raimondii HOM05D000030 ORTHO05D009563 9.3e-16 87.8 152 37.5
Lsat_1_v5_gn_5_24240 Lactuca sativa HOM05D000030 ORTHO05D009563 9.3e-16 87.8 158 38.0
Actinidia39805 Actinidia chinensis HOM05D000030 ORTHO05D000031 2.1e-15 86.7 160 38.1
ClCG02G014930 Citrullus lanatus HOM05D000030 ORTHO05D009563 2.1e-15 86.7 159 39.0
CsaV3_2G007070 Cucumis sativus L. HOM05D000030 ORTHO05D009563 2.1e-15 86.7 155 38.7
Duzib068G1203 Durio zibethinus HOM05D000030 ORTHO05D009563 2.1e-15 86.7 152 38.8
Glyma.17G122200 Glycine max HOM05D000030 ORTHO05D009563 2.1e-15 86.7 152 40.8
Atru.chr9.734 Acer truncatum HOM05D000030 ORTHO05D009563 2.7e-15 86.3 159 37.1
TPR.G26769 Trifolium pratense HOM05D000030 ORTHO05D009563 3.5e-15 85.9 159 39.6
vmacro17683 Vaccinium macrocarpon HOM05D000030 ORTHO05D009563 3.5e-15 85.9 160 37.5
MSTRG.9564 Avicennia marina HOM05D000030 ORTHO05D009563 4.6e-15 85.5 202 34.2
MELO3C031531.2 Cucumis melo HOM05D000030 ORTHO05D009563 4.6e-15 85.5 155 38.1
HanXRQChr05g0157751 Helianthus annuus HOM05D000030 ORTHO05D009563 4.6e-15 85.5 162 37.7
QL10p023146 Quercus lobata HOM05D000030 ORTHO05D009563 4.6e-15 85.5 159 37.7
Ca_02531_v3 Cicer arietinum L. HOM05D000030 ORTHO05D009563 6.0e-15 85.1 155 38.1
Haze_18591 Corylus avellana HOM05D000030 ORTHO05D009563 7.9e-15 84.7 159 36.5
RcHm_v2.0_Chr7g0184431 Rosa chinensis HOM05D000030 ORTHO05D009563 7.9e-15 84.7 155 37.4
Actinidia31034 Actinidia chinensis HOM05D005660 ORTHO05D009563 1.0e-14 84.3 160 37.5
MD06G1210000 Malus domestica HOM05D000030 ORTHO05D009563 1.0e-14 84.3 155 36.8
TWI81G0331 Tripterygium wilfordii HOM05D000030 ORTHO05D009563 1.8e-14 83.6 159 39.0
Eucgr.B00689 Eucalyptus grandis HOM05D000030 ORTHO05D009563 3.0e-14 82.8 159 34.6
Lj9C216T3 Lonicera japonica HOM05D000030 ORTHO05D000031 3.0e-14 82.8 142 38.7
PGR083G1920 Punica granatum HOM05D000030 ORTHO05D009563 3.0e-14 82.8 159 35.8
RhsimUnG0106400 Rhododendron simsii HOM05D000030 ORTHO05D009563 3.0e-14 82.8 160 36.9
Sed0016338 Sechium edule HOM05D000030 ORTHO05D009563 3.9e-14 82.4 159 37.1
Nn4g23693 Nelumbo nucifera HOM05D000030 ORTHO05D009563 5.1e-14 82.0 155 34.8
TWI15G1164 Tripterygium wilfordii HOM05D000030 ORTHO05D009563 5.1e-14 82.0 159 39.0
CANSAT80G1142 Cannabis sativa HOM05D000030 ORTHO05D009563 8.7e-14 81.3 155 38.7
ECA246G2413 Erigeron canadensis HOM05D000030 ORTHO05D009563 1.1e-13 80.9 157 35.7
Aqoxy3G03880 Aquilegia oxysepala HOM05D000030 ORTHO05D009563 1.5e-13 80.5 154 35.7
AUR62036941 Chenopodium quinoa HOM05D000030 ORTHO05D009563 8.1e-12 74.7 155 33.5
AUR62032181 Chenopodium quinoa HOM05D000030 ORTHO05D009563 3.1e-11 72.8 155 32.9
Aa31LG7G3250 Aethionema arabicum HOM05D000030 ORTHO05D009563 6.9e-11 71.6 161 30.4
AT1G18560 Arabidopsis thaliana HOM05D000030 ORTHO05D009563 1.5e-10 70.5 156 32.7
PSO063G1480 Papaver somniferum HOM05D000030 ORTHO05D009563 1.5e-10 70.5 152 32.9
CARHR019180 Cardamine hirsuta HOM05D000030 ORTHO05D009563 7.6e-10 68.2 156 30.8
AL1G31000 Arabidopsis lyrata HOM05D000030 ORTHO05D000031 1.7e-09 67.0 160 30.6
Haze_18592 Corylus avellana HOM05D000030 ORTHO05D009563 2.2e-09 66.6 95 40.0
PSO063G2009 Papaver somniferum HOM05D000030 ORTHO05D000031 2.2e-09 66.6 145 31.7
PSO063G2153 Papaver somniferum HOM05D000030 ORTHO05D009563 2.2e-09 66.6 145 31.7
EL10Ac5g11242 Beta vulgaris HOM05D000030 ORTHO05D009563 2.9e-09 66.2 151 34.4
Carub.0001s1819 Capsella rubella HOM05D000030 ORTHO05D009563 3.8e-09 65.9 157 30.6
Hund09994 Selenicereus undatus HOM05D000030 ORTHO05D009563 4.9e-09 65.5 154 31.8
THA.LOC104812116 Tarenaya hassleriana HOM05D000030 ORTHO05D009563 4.9e-09 65.5 158 33.5
Sp1g16510 Schrenkiella parvula HOM05D000030 ORTHO05D009563 6.4e-09 65.1 156 31.4
Thhalv10006990m.g Eutrema salsugineum HOM05D000030 ORTHO05D009563 2.4e-08 63.2 160 30.0
A09p59880 Brassica napus HOM05D000030 ORTHO05D009563 9.3e-08 61.2 161 29.8
CDE06G0579 Ceratophyllum demersum HOM05D000030 ORTHO05D009563 1.6e-07 60.5 150 29.3
BraA09t41360Z Brassica rapa HOM05D000030 ORTHO05D009563 2.1e-07 60.1 161 30.4
C08p43280 Brassica napus HOM05D000030 ORTHO05D009563 3.5e-07 59.3 161 31.7
BolC8t51878H Brassica oleracea HOM05D000030 ORTHO05D009563 3.5e-07 59.3 161 31.7
PSO421G0305 Papaver somniferum HOM05D000030 ORTHO05D009563 7.9e-07 58.2 147 30.6


User provided reference genes

Program Settings