Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007768g0030 Nicotiana tabacum HOM05D005641 ORTHO05D007953 2.7e-79 298.5 141 100.0
Nitab4.5_0013410g0010 Nicotiana tabacum HOM05D005641 ORTHO05D007953 6.5e-33 144.4 75 89.3
Nitab4.5_0001259g0120 Nicotiana tabacum HOM05D005641 ORTHO05D007953 2.7e-23 112.5 62 85.5
Nitab4.5_0012285g0030 Nicotiana tabacum HOM05D005641 ORTHO05D007953 2.7e-23 112.5 62 85.5
Peaxi162Scf00003g02633 Petunia axillaris HOM05D005641 ORTHO05D007953 9.7e-21 104.0 58 84.5
PGSC0003DMG400005454 Solanum tuberosum HOM05D005641 ORTHO05D007953 4.1e-19 98.6 62 72.6
CAN.G1.68 Capsicum annuum HOM05D005641 ORTHO05D007953 2.0e-18 96.3 63 71.4
Peaxi162Scf00083g00163 Petunia axillaris HOM05D005641 ORTHO05D007953 2.0e-18 96.3 62 72.6
Sopen10g020870 Solanum pennellii HOM05D005641 ORTHO05D007953 2.0e-18 96.3 63 74.6
Solyc10g049650.3 Solanum lycopersicum HOM05D005641 ORTHO05D007953 6.5e-17 91.3 63 71.4
MSTRG.5328 Avicennia marina HOM05D005641 ORTHO05D007953 3.6e-15 85.5 61 63.9
SGA_v2.0_scaffold337G49200 Striga asiatica HOM05D005641 ORTHO05D007953 3.6e-15 85.5 62 64.5
vmacro19527 Vaccinium macrocarpon HOM05D005641 ORTHO05D007953 3.6e-15 85.5 63 63.5
CiPaw.06G166900 Carya illinoinensis HOM05D005641 ORTHO05D007953 3.9e-14 82.0 83 51.8
Potri.009G090100 Populus trichocarpa HOM05D005641 ORTHO05D007953 3.9e-14 82.0 76 55.3
RcHm_v2.0_Chr6g0253411 Rosa chinensis HOM05D005641 ORTHO05D007953 3.9e-14 82.0 77 54.5
COL.COLO4_32537 Corchorus olitorius HOM05D005641 ORTHO05D007953 1.5e-13 80.1 77 50.6
Dinv42223 Davidia involucrata HOM05D005641 ORTHO05D007953 1.5e-13 80.1 63 63.5
FAN15G3008 Fragaria x ananassa HOM05D005641 ORTHO05D007953 2.0e-13 79.7 78 52.6
FAN20G2714 Fragaria x ananassa HOM05D005641 ORTHO05D007953 2.0e-13 79.7 78 52.6
Oeu037265.1 Olea europaea HOM05D005641 ORTHO05D007953 2.0e-13 79.7 66 63.6
Actinidia27984 Actinidia chinensis HOM05D005641 ORTHO05D007953 2.6e-13 79.3 64 64.1
FvH4_2g04060 Fragaria vesca HOM05D005641 ORTHO05D007953 4.4e-13 78.6 78 52.6
Ciclev10029502m.g Citrus clementina HOM05D005641 ORTHO05D007953 7.4e-13 77.8 74 58.1
AUR62031337 Chenopodium quinoa HOM05D005641 ORTHO05D007953 9.7e-13 77.4 150 36.7
Sabra09G0069700 Salix brachista HOM05D005641 ORTHO05D007953 9.7e-13 77.4 65 56.9
Thecc.02G114700 Theobroma cacao HOM05D005641 ORTHO05D007953 9.7e-13 77.4 77 50.6
FAN24G2036 Fragaria x ananassa HOM05D005641 ORTHO05D007953 1.3e-12 77.0 78 51.3
GSVIVG01037858001 Vitis vinifera HOM05D005641 ORTHO05D007953 1.3e-12 77.0 75 58.7
Ah.09g231980 Amaranthus hybridus HOM05D005641 ORTHO05D007953 1.7e-12 76.6 64 67.2
AUR62022504 Chenopodium quinoa HOM05D005641 ORTHO05D007953 1.7e-12 76.6 150 36.0
Rhsim05G0090100 Rhododendron simsii HOM05D005641 ORTHO05D007953 1.7e-12 76.6 63 58.7
Lsat_1_v5_gn_9_112460 Lactuca sativa HOM05D005641 ORTHO05D007953 2.2e-12 76.3 60 55.0
FAN27G3103 Fragaria x ananassa HOM05D005641 ORTHO05D007953 2.8e-12 75.9 78 50.0
Cpa.g.sc106.73 Carica papaya HOM05D005641 ORTHO05D007953 3.7e-12 75.5 65 56.9
Migut.O00678 Erythranthe guttata HOM05D005641 ORTHO05D007953 3.7e-12 75.5 61 55.7
Migut.N01150 Erythranthe guttata HOM05D005641 ORTHO05D007953 4.8e-12 75.1 61 55.7
HanXRQChr03g0069981 Helianthus annuus HOM05D005641 ORTHO05D007953 4.8e-12 75.1 57 57.9
QL02p069388 Quercus lobata HOM05D005641 ORTHO05D007953 4.8e-12 75.1 71 54.9
ECA240G0483 Erigeron canadensis HOM05D005641 ORTHO05D007953 6.3e-12 74.7 62 54.8
MD05G1097100 Malus domestica HOM05D005641 ORTHO05D007953 8.2e-12 74.3 61 59.0
Sed0000346 Sechium edule HOM05D005641 ORTHO05D007953 8.2e-12 74.3 62 59.7
EL10Ac8g19366 Beta vulgaris HOM05D005641 ORTHO05D007953 1.1e-11 73.9 59 62.7
Eucgr.G01263 Eucalyptus grandis HOM05D005641 ORTHO05D007953 1.1e-11 73.9 80 51.2
CSS0033790 Camellia sinensis var. sinensis HOM05D005641 ORTHO05D007953 1.8e-11 73.2 46 69.6
CSS0039741 Camellia sinensis var. sinensis HOM05D005641 ORTHO05D007953 1.8e-11 73.2 46 69.6
Duzib052G0024 Durio zibethinus HOM05D005641 ORTHO05D007953 1.8e-11 73.2 80 48.8
Hma1.2p1_1023F.1_g248880 Hydrangea macrophylla HOM05D005641 ORTHO05D007953 1.8e-11 73.2 60 58.3
unitig_744.g24456 Utricularia gibba HOM05D005641 ORTHO05D007953 1.8e-11 73.2 62 61.3
Manes.10G080400 Manihot esculenta HOM05D005641 ORTHO05D007953 2.4e-11 72.8 80 53.8
Sc14g0002550 Simmondsia chinensis HOM05D005641 ORTHO05D007953 4.1e-11 72.0 60 60.0
MELO3C017992.2 Cucumis melo HOM05D005641 ORTHO05D007953 5.3e-11 71.6 70 52.9
Gorai.005G232800 Gossypium raimondii HOM05D005641 ORTHO05D007953 5.3e-11 71.6 75 52.0
Gohir.A03G183900 Gossypium hirsutum HOM05D005641 ORTHO05D007953 7.0e-11 71.2 64 54.7
CsaV3_4G000430 Cucumis sativus L. HOM05D005641 ORTHO05D007953 1.2e-10 70.5 62 56.5
PSO541G1794 Papaver somniferum HOM05D005641 ORTHO05D007953 1.2e-10 70.5 57 63.2
VMungo1215G0158 Vigna mungo HOM05D005641 ORTHO05D007953 1.2e-10 70.5 74 51.4
Haze_10242 Corylus avellana HOM05D005641 ORTHO05D007953 1.6e-10 70.1 45 66.7
Eucgr.G01266 Eucalyptus grandis HOM05D005641 ORTHO05D007953 1.6e-10 70.1 83 49.4
Gohir.D02G205400 Gossypium hirsutum HOM05D005641 ORTHO05D007953 1.6e-10 70.1 75 52.0
Prupe.8G141700 Prunus persica HOM05D005641 ORTHO05D007953 2.0e-10 69.7 64 51.6
TPR.G8292 Trifolium pratense HOM05D005641 ORTHO05D007953 2.0e-10 69.7 58 53.4
CANSAT25G1977 Cannabis sativa HOM05D005641 ORTHO05D007953 2.6e-10 69.3 63 54.0
Cc02_g19690 Coffea canephora HOM05D005641 ORTHO05D007953 3.5e-10 68.9 43 67.4
Hma1.2p1_1023F.1_g248890 Hydrangea macrophylla HOM05D005641 ORTHO05D007953 3.5e-10 68.9 56 60.7
Atru.chr5.2402 Acer truncatum HOM05D005641 ORTHO05D007953 7.7e-10 67.8 74 47.3
Phvul.002G052300 Phaseolus vulgaris HOM05D005641 ORTHO05D007953 1.0e-09 67.4 74 48.6
PGR042G1829 Punica granatum HOM05D005641 ORTHO05D007953 1.3e-09 67.0 79 45.6
TWI14G0306 Tripterygium wilfordii HOM05D005641 ORTHO05D007953 1.3e-09 67.0 68 54.4
PSO675G2895 Papaver somniferum HOM05D005641 ORTHO05D007953 1.7e-09 66.6 58 62.1
CARHR284800 Cardamine hirsuta HOM05D005641 ORTHO05D007953 2.9e-09 65.9 64 51.6
Cfa004645 Carpinus fangiana HOM05D005641 ORTHO05D007953 2.9e-09 65.9 41 70.7
HPP92_020459 Vanilla planifolia HOM05D005641 ORTHO05D007953 2.9e-09 65.9 74 48.6
Aqoxy6G02714 Aquilegia oxysepala HOM05D005641 ORTHO05D007953 3.8e-09 65.5 43 67.4
Carub.0003s2882 Capsella rubella HOM05D005641 ORTHO05D007953 3.8e-09 65.5 65 52.3
Medtr5g005150 Medicago truncatula HOM05D005641 ORTHO05D007953 3.8e-09 65.5 71 46.5
Thhalv10022899m.g Eutrema salsugineum HOM05D005641 ORTHO05D007953 5.0e-09 65.1 65 53.8
AT2G14825 Arabidopsis thaliana HOM05D005641 ORTHO05D007953 8.5e-09 64.3 63 50.8
DCAR_029115 Daucus carota HOM05D005641 ORTHO05D007953 1.1e-08 63.9 51 56.9
Lj1g0011960 Lotus japonicus HOM05D005641 ORTHO05D007953 1.1e-08 63.9 58 55.2
PGR042G3728 Punica granatum HOM05D005641 ORTHO05D007953 1.1e-08 63.9 61 49.2
TAR376G1148 Trochodendron aralioides HOM05D005641 ORTHO05D007953 1.5e-08 63.5 39 71.8
ClCG10G010510 Citrullus lanatus HOM05D005641 ORTHO05D007953 1.9e-08 63.2 36 75.0
HPP92_026175 Vanilla planifolia HOM05D005641 ORTHO05D007953 3.2e-08 62.4 74 47.3
AL3G46570 Arabidopsis lyrata HOM05D005641 ORTHO05D007953 4.2e-08 62.0 65 47.7
Aa31LG8G12890 Aethionema arabicum HOM05D005641 ORTHO05D007953 5.5e-08 61.6 67 49.3
A09p10560 Brassica napus HOM05D005641 ORTHO05D007953 5.5e-08 61.6 66 47.0
BraA09t36698Z Brassica rapa HOM05D005641 ORTHO05D007953 5.5e-08 61.6 66 47.0
Hund12610 Selenicereus undatus HOM05D005641 ORTHO05D007953 7.2e-08 61.2 43 65.1
BcaC04g23064 Brassica carinata HOM05D005641 ORTHO05D007953 9.4e-08 60.8 59 47.5
C09p12490 Brassica napus HOM05D005641 ORTHO05D007953 9.4e-08 60.8 59 47.5
BolC9t54144H Brassica oleracea HOM05D005641 ORTHO05D007953 9.4e-08 60.8 59 47.5
Ciclev10028542m.g Citrus clementina HOM05D005641 ORTHO05D007953 9.4e-08 60.8 52 59.6
Nn1g04606 Nelumbo nucifera HOM05D005641 ORTHO05D007953 9.4e-08 60.8 40 65.0
Sp3g28020 Schrenkiella parvula HOM05D005641 ORTHO05D007953 9.4e-08 60.8 65 46.2
SEGI_20221 Sequoiadendron giganteum HOM05D005641 ORTHO05D007953 1.6e-07 60.1 68 47.1
SEGI_25796 Sequoiadendron giganteum HOM05D005641 ORTHO05D007953 1.6e-07 60.1 68 47.1
Glyma.01G243000 Glycine max HOM05D005641 ORTHO05D007953 2.1e-07 59.7 59 54.2
arahy.Tifrunner.gnm1.ann1.GRNJ5W Arachis hypogaea HOM05D005641 ORTHO05D007953 2.7e-07 59.3 53 58.5
THA.LOC104819534 Tarenaya hassleriana HOM05D005641 ORTHO05D007953 8.0e-07 57.8 76 40.8
CDE06G0500 Ceratophyllum demersum HOM05D005641 ORTHO05D007953 1.0e-06 57.4 74 44.6
ATR0019G033 Amborella trichopoda HOM05D005641 ORTHO05D007953 3.0e-06 55.8 86 40.7


User provided reference genes

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